RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 MP68P56378 58 aa12.9□□□□□ -0.34
CSPG5-202ENST00000383738 LINC00575Q6W349 94 aa12.89□□□□□ -0.35
CSPG5-202ENST00000383738 C10orf25Q5T742 122 aa12.88□□□□□ -0.35
CSPG5-202ENST00000383738 MUC7Q8TAX7 377 aa12.88□□□□□ -0.35
CSPG5-202ENST00000383738 LINC00336Q6ZUF6 198 aa12.88□□□□□ -0.35
CSPG5-202ENST00000383738 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
CSPG5-202ENST00000383738 PRO0628Q9UI54 55 aa12.85□□□□□ -0.35
CSPG5-202ENST00000383738 K7EIL1 84 aa12.85□□□□□ -0.35
CSPG5-202ENST00000383738 NDUFC1O43677 76 aa12.84□□□□□ -0.35
CSPG5-202ENST00000383738 SPENQ96T58 3664 aaKnown RBP12.84□□□□□ -0.35
CSPG5-202ENST00000383738 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
CSPG5-202ENST00000383738 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
CSPG5-202ENST00000383738 CSMD2Q7Z408 3487 aa12.83□□□□□ -0.36
CSPG5-202ENST00000383738 CDK2AP2O75956 126 aa12.83□□□□□ -0.36
CSPG5-202ENST00000383738 Q6ZRU5 148 aa12.82□□□□□ -0.36
CSPG5-202ENST00000383738 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
CSPG5-202ENST00000383738 PRYO14603 147 aa12.82□□□□□ -0.36
CSPG5-202ENST00000383738 H0Y9J4 135 aa12.81□□□□□ -0.36
CSPG5-202ENST00000383738 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
CSPG5-202ENST00000383738 FBN1P35555 2871 aaKnown RBP12.8□□□□□ -0.36
CSPG5-202ENST00000383738 C14orf177Q52M58 125 aa12.79□□□□□ -0.36
CSPG5-202ENST00000383738 COX17Q14061 63 aa12.78□□□□□ -0.36
CSPG5-202ENST00000383738 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
CSPG5-202ENST00000383738 Q6ZQT0 140 aa12.76□□□□□ -0.37
CSPG5-202ENST00000383738 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
CSPG5-202ENST00000383738 CHKB-CPT1BH3BT56 60 aa12.75□□□□□ -0.37
CSPG5-202ENST00000383738 PMAIP1Q13794 54 aa12.74□□□□□ -0.37
CSPG5-202ENST00000383738 H3BQ85 93 aa12.73□□□□□ -0.37
CSPG5-202ENST00000383738 LINC00208Q96KT6 92 aa12.73□□□□□ -0.37
CSPG5-202ENST00000383738 M0R378 163 aa12.73□□□□□ -0.37
CSPG5-202ENST00000383738 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
CSPG5-202ENST00000383738 NBPF19A0A087WUL8 3843 aa12.71□□□□□ -0.37
CSPG5-202ENST00000383738 SMIM29Q86T20 159 aa12.71□□□□□ -0.37
CSPG5-202ENST00000383738 EGFEM1PQ0D2K5 195 aa12.71□□□□□ -0.38
CSPG5-202ENST00000383738 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
CSPG5-202ENST00000383738 TENM1Q9UKZ4 2725 aa12.69□□□□□ -0.38
CSPG5-202ENST00000383738 ATP5EP56381 51 aaPredicted RBP12.69□□□□□ -0.38
CSPG5-202ENST00000383738 A6NED7 52 aa12.69□□□□□ -0.38
CSPG5-202ENST00000383738 H7BZZ5 65 aa12.69□□□□□ -0.38
CSPG5-202ENST00000383738 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
CSPG5-202ENST00000383738 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
CSPG5-202ENST00000383738 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
CSPG5-202ENST00000383738 B9D2Q9BPU9 175 aa12.64□□□□□ -0.39
CSPG5-202ENST00000383738 CXCL6P80162 114 aa12.64□□□□□ -0.39
CSPG5-202ENST00000383738 SEC61GP60059 68 aa12.63□□□□□ -0.39
CSPG5-202ENST00000383738 OXTP01178 125 aa12.63□□□□□ -0.39
CSPG5-202ENST00000383738 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
CSPG5-202ENST00000383738 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
CSPG5-202ENST00000383738 IGLV9-49A0A0B4J1Y8 123 aa12.61□□□□□ -0.39
CSPG5-202ENST00000383738 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
CSPG5-202ENST00000383738 PRLHP81277 87 aa12.61□□□□□ -0.39
CSPG5-202ENST00000383738 PRR15LQ9BU68 103 aa12.6□□□□□ -0.39
CSPG5-202ENST00000383738 C1orf134Q5TEV5 83 aa12.59□□□□□ -0.39
CSPG5-202ENST00000383738 IGLV5-52A0A0A0MRZ9 124 aa12.59□□□□□ -0.39
CSPG5-202ENST00000383738 NDUFB1O75438 58 aa12.59□□□□□ -0.39
CSPG5-202ENST00000383738 CHTF8P0CG12 524 aa12.59□□□□□ -0.39
CSPG5-202ENST00000383738 SPINK6Q6UWN8 80 aa12.59□□□□□ -0.39
CSPG5-202ENST00000383738 A0A087WSZ3 146 aa12.58□□□□□ -0.4
CSPG5-202ENST00000383738 PCOTHQ58A44 107 aa12.58□□□□□ -0.4
CSPG5-202ENST00000383738 C22orf24Q9Y442 160 aa12.57□□□□□ -0.4
CSPG5-202ENST00000383738 VWFP04275 2813 aa12.56□□□□□ -0.4
CSPG5-202ENST00000383738 LINC01600Q96MT4 127 aa12.56□□□□□ -0.4
CSPG5-202ENST00000383738 A0A0G2JQZ4 141 aa12.55□□□□□ -0.4
CSPG5-202ENST00000383738 A0A1W2PNN7 141 aa12.55□□□□□ -0.4
CSPG5-202ENST00000383738 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
CSPG5-202ENST00000383738 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.4
CSPG5-202ENST00000383738 Q5XG85 94 aa12.52□□□□□ -0.4
CSPG5-202ENST00000383738 PDZD2O15018 2839 aa12.52□□□□□ -0.4
CSPG5-202ENST00000383738 KLKP1Q107X0 134 aa12.51□□□□□ -0.41
CSPG5-202ENST00000383738 ST20-AS1Q8NBB2 130 aa12.51□□□□□ -0.41
CSPG5-202ENST00000383738 LOC110117498A0A087WWA1 95 aa12.51□□□□□ -0.41
CSPG5-202ENST00000383738 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
CSPG5-202ENST00000383738 C7orf33Q8WU49 177 aa12.51□□□□□ -0.41
CSPG5-202ENST00000383738 DHRS4-AS1Q9P1J3 65 aa12.49□□□□□ -0.41
CSPG5-202ENST00000383738 FAM168BA1KXE4 195 aa12.48□□□□□ -0.41
CSPG5-202ENST00000383738 H3BNG1 76 aa12.48□□□□□ -0.41
CSPG5-202ENST00000383738 NBDYA0A0U1RRE5 68 aa12.47□□□□□ -0.41
CSPG5-202ENST00000383738 A8MUN3 132 aa12.47□□□□□ -0.41
CSPG5-202ENST00000383738 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
CSPG5-202ENST00000383738 Q6ZRP5 223 aa12.46□□□□□ -0.41
CSPG5-202ENST00000383738 LINC00167Q96N53 147 aa12.46□□□□□ -0.41
CSPG5-202ENST00000383738 ELOF1P60002 83 aaKnown RBP12.45□□□□□ -0.42
CSPG5-202ENST00000383738 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
CSPG5-202ENST00000383738 RPL37AP61513 92 aaKnown RBP12.45□□□□□ -0.42
CSPG5-202ENST00000383738 PHF5AQ7RTV0 110 aaKnown RBP12.43□□□□□ -0.42
CSPG5-202ENST00000383738 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
CSPG5-202ENST00000383738 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
CSPG5-202ENST00000383738 HCG22E2RYF7 251 aa12.42□□□□□ -0.42
CSPG5-202ENST00000383738 Q8NDZ9 215 aa12.42□□□□□ -0.42
CSPG5-202ENST00000383738 H0Y9P7 68 aa12.41□□□□□ -0.42
CSPG5-202ENST00000383738 CASC2Q6XLA1 102 aa12.4□□□□□ -0.42
CSPG5-202ENST00000383738 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
CSPG5-202ENST00000383738 K7EQZ3 153 aa12.4□□□□□ -0.43
CSPG5-202ENST00000383738 FP248Q71RG6 208 aaPredicted RBP12.39□□□□□ -0.43
CSPG5-202ENST00000383738 C1orf64Q8NEQ6 169 aa12.38□□□□□ -0.43
CSPG5-202ENST00000383738 BCE1O60756 84 aa12.38□□□□□ -0.43
CSPG5-202ENST00000383738 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
CSPG5-202ENST00000383738 CIRBP-AS1Q8TBR5 109 aa12.37□□□□□ -0.43
CSPG5-202ENST00000383738 VPREB1P12018 145 aa12.36□□□□□ -0.43
CSPG5-202ENST00000383738 PRR34Q9NV39 138 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms