RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 PAM16Q9Y3D7 125 aa15.18■□□□□ 0.02
NPHP3-202ENST00000383282 SPRR4Q96PI1 79 aa15.17■□□□□ 0.02
NPHP3-202ENST00000383282 LITAFQ99732 161 aa15.17■□□□□ 0.02
NPHP3-202ENST00000383282 LOC107984156A0A0G2JMH3 177 aa15.16■□□□□ 0.02
NPHP3-202ENST00000383282 NCR3O14931 201 aa15.16■□□□□ 0.02
NPHP3-202ENST00000383282 ARL17AQ8IVW1 177 aa15.16■□□□□ 0.02
NPHP3-202ENST00000383282 PPDPFQ9H3Y8 114 aa15.16■□□□□ 0.02
NPHP3-202ENST00000383282 SPATA45Q537H7 98 aa15.15■□□□□ 0.02
NPHP3-202ENST00000383282 C4orf48Q5BLP8 95 aa15.15■□□□□ 0.02
NPHP3-202ENST00000383282 LCE2AQ5TA79 106 aaPredicted RBP15.14■□□□□ 0.01
NPHP3-202ENST00000383282 MUC17Q685J3 4493 aa15.14■□□□□ 0.01
NPHP3-202ENST00000383282 PYY3Q5JQD4 70 aa15.13■□□□□ 0.01
NPHP3-202ENST00000383282 LINC00308Q8TCZ7 52 aa15.13■□□□□ 0.01
NPHP3-202ENST00000383282 SPANXDQ9BXN6 97 aa15.13■□□□□ 0.01
NPHP3-202ENST00000383282 SPANXCQ9NY87 97 aa15.13■□□□□ 0.01
NPHP3-202ENST00000383282 PRYO14603 147 aa15.12■□□□□ 0.01
NPHP3-202ENST00000383282 SOSTDC1Q6X4U4 206 aa15.12■□□□□ 0.01
NPHP3-202ENST00000383282 COPS9Q8WXC6 57 aa15.12■□□□□ 0.01
NPHP3-202ENST00000383282 KRTAP9-2Q9BYQ4 174 aa15.12■□□□□ 0.01
NPHP3-202ENST00000383282 COX8AP10176 69 aa15.11■□□□□ 0.01
NPHP3-202ENST00000383282 NDUFC2O95298 119 aa15.1■□□□□ 0.01
NPHP3-202ENST00000383282 FP248Q71RG6 208 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-202ENST00000383282 SPANXB1Q9NS25 103 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-202ENST00000383282 Q6ZVH6 145 aa15.09■□□□□ 0.01
NPHP3-202ENST00000383282 LINC00337Q8N6G1 96 aa15.08■□□□□ 0
NPHP3-202ENST00000383282 IFITM1P13164 125 aa15.07■□□□□ 0
NPHP3-202ENST00000383282 C14orf144Q96I85 54 aa15.07■□□□□ 0
NPHP3-202ENST00000383282 TRBV10-2A0A0K0K1G8 114 aa15.06■□□□□ 0
NPHP3-202ENST00000383282 ETDCA0A1B0GVM5 59 aa15.06■□□□□ 0
NPHP3-202ENST00000383282 EIF4EBP3O60516 100 aaPredicted RBP15.06■□□□□ 0
NPHP3-202ENST00000383282 S100A12P80511 92 aa15.06■□□□□ 0
NPHP3-202ENST00000383282 KCNQ1DNQ9H478 68 aa15.06■□□□□ 0
NPHP3-202ENST00000383282 SPRR1AP35321 89 aa15.04■□□□□ -0
NPHP3-202ENST00000383282 S100A7L2Q5SY68 101 aa15.04■□□□□ -0
NPHP3-202ENST00000383282 Q8NBF4 154 aa15.04■□□□□ -0
NPHP3-202ENST00000383282 SMCR5Q8TEV8 140 aa15.04■□□□□ -0
NPHP3-202ENST00000383282 DLEU1O43261 78 aa15.03■□□□□ -0
NPHP3-202ENST00000383282 DDTP30046 118 aa15.02■□□□□ -0
NPHP3-202ENST00000383282 SLC25A34Q6PIV7 304 aa15.02■□□□□ -0
NPHP3-202ENST00000383282 TRBV10-3A0A0K0K1G6 114 aa15.01□□□□□ -0.01
NPHP3-202ENST00000383282 MUSTN1Q8IVN3 82 aa15.01□□□□□ -0.01
NPHP3-202ENST00000383282 SPINK1P00995 79 aa14.99□□□□□ -0.01
NPHP3-202ENST00000383282 KRTAP4-16G5E9R7 235 aaPredicted RBP14.98□□□□□ -0.01
NPHP3-202ENST00000383282 LINC00518Q8N0U6 118 aa14.98□□□□□ -0.01
NPHP3-202ENST00000383282 OR13C6PQ8NH95 151 aa14.98□□□□□ -0.01
NPHP3-202ENST00000383282 HIST1H4GQ99525 98 aa14.98□□□□□ -0.01
NPHP3-202ENST00000383282 LINC00483Q53H64 154 aa14.95□□□□□ -0.02
NPHP3-202ENST00000383282 GAGE2AQ6NT46 116 aa14.95□□□□□ -0.02
NPHP3-202ENST00000383282 CBY1Q9Y3M2 126 aa14.95□□□□□ -0.02
NPHP3-202ENST00000383282 IGLV6-57P01721 117 aa14.93□□□□□ -0.02
NPHP3-202ENST00000383282 KRTAP13-3Q3SY46 172 aa14.93□□□□□ -0.02
NPHP3-202ENST00000383282 HIGD1BQ9P298 99 aa14.93□□□□□ -0.02
NPHP3-202ENST00000383282 TRAV23DV6A0A075B6W5 121 aa14.91□□□□□ -0.02
NPHP3-202ENST00000383282 B5MCH6 92 aa14.91□□□□□ -0.02
NPHP3-202ENST00000383282 IGLV9-49A0A0B4J1Y8 123 aa14.9□□□□□ -0.02
NPHP3-202ENST00000383282 MOBPQ13875 183 aa14.89□□□□□ -0.03
NPHP3-202ENST00000383282 A6NDN8 102 aa14.88□□□□□ -0.03
NPHP3-202ENST00000383282 SMIM6P0DI80 62 aa14.88□□□□□ -0.03
NPHP3-202ENST00000383282 ASB16-AS1Q495Z4 193 aa14.88□□□□□ -0.03
NPHP3-202ENST00000383282 SSBP3-AS1Q7Z2R9 100 aa14.88□□□□□ -0.03
NPHP3-202ENST00000383282 RPS29P62273 56 aaKnown RBP14.87□□□□□ -0.03
NPHP3-202ENST00000383282 C2orf91Q6ZV80 131 aa14.87□□□□□ -0.03
NPHP3-202ENST00000383282 A4D1N5 150 aa14.86□□□□□ -0.03
NPHP3-202ENST00000383282 TRAV13-2A0A0B4J235 113 aa14.85□□□□□ -0.03
NPHP3-202ENST00000383282 ERC2-IT1O76042 136 aa14.85□□□□□ -0.03
NPHP3-202ENST00000383282 UQCR10Q9UDW1 63 aa14.85□□□□□ -0.03
NPHP3-202ENST00000383282 LOC105371267A0A1B0GV96 52 aa14.84□□□□□ -0.03
NPHP3-202ENST00000383282 HINT1P49773 126 aaPredicted RBP14.84□□□□□ -0.03
NPHP3-202ENST00000383282 ZNF73O43830 326 aaPredicted RBP14.83□□□□□ -0.04
NPHP3-202ENST00000383282 SEC61BP60468 96 aaKnown RBP14.83□□□□□ -0.04
NPHP3-202ENST00000383282 Q6ZRX8 168 aa14.83□□□□□ -0.04
NPHP3-202ENST00000383282 TAL2Q16559 108 aa14.82□□□□□ -0.04
NPHP3-202ENST00000383282 Q9BRP9 147 aa14.82□□□□□ -0.04
NPHP3-202ENST00000383282 Q8N377 158 aa14.8□□□□□ -0.04
NPHP3-202ENST00000383282 C12orf57Q99622 126 aa14.8□□□□□ -0.04
NPHP3-202ENST00000383282 SLC25A20O43772 301 aa14.79□□□□□ -0.04
NPHP3-202ENST00000383282 CEND1Q8N111 149 aa14.77□□□□□ -0.05
NPHP3-202ENST00000383282 TMEM238LA0A1B0GVL6 79 aa14.76□□□□□ -0.05
NPHP3-202ENST00000383282 A6NJY4 79 aa14.76□□□□□ -0.05
NPHP3-202ENST00000383282 LINC01547P58512 204 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-202ENST00000383282 PRO1933Q9H354 126 aa14.76□□□□□ -0.05
NPHP3-202ENST00000383282 HSD52Q0P140 79 aa14.75□□□□□ -0.05
NPHP3-202ENST00000383282 C9orf153Q5TBE3 101 aa14.75□□□□□ -0.05
NPHP3-202ENST00000383282 KRTAP9-6A0A140TA67 174 aa14.74□□□□□ -0.05
NPHP3-202ENST00000383282 C6orf99Q4VX62 202 aa14.74□□□□□ -0.05
NPHP3-202ENST00000383282 RAB37Q96AX2 223 aa14.73□□□□□ -0.05
NPHP3-202ENST00000383282 COX7BP24311 80 aa14.71□□□□□ -0.05
NPHP3-202ENST00000383282 SMIM11BQ8TCY0 68 aa14.7□□□□□ -0.06
NPHP3-202ENST00000383282 KRTAP4-1Q9BYQ7 146 aa14.69□□□□□ -0.06
NPHP3-202ENST00000383282 CFC1BP0CG36 223 aa14.68□□□□□ -0.06
NPHP3-202ENST00000383282 CFC1P0CG37 223 aa14.68□□□□□ -0.06
NPHP3-202ENST00000383282 A0A0B4J2C4 111 aa14.67□□□□□ -0.06
NPHP3-202ENST00000383282 FXYD2P54710 66 aa14.67□□□□□ -0.06
NPHP3-202ENST00000383282 TRBV7-6A0A0J9YX20 115 aa14.66□□□□□ -0.06
NPHP3-202ENST00000383282 A0A1B0GWB2 263 aa14.66□□□□□ -0.06
NPHP3-202ENST00000383282 ELOF1P60002 83 aaKnown RBP14.66□□□□□ -0.06
NPHP3-202ENST00000383282 XP32Q5T750 250 aa14.66□□□□□ -0.06
NPHP3-202ENST00000383282 DHRS4-AS1Q9P1J3 65 aa14.65□□□□□ -0.06
NPHP3-202ENST00000383282 TSTD3H0UI37 97 aa14.64□□□□□ -0.07
NPHP3-202ENST00000383282 H7C2G1 150 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms