RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 LITAFQ99732 161 aa9.94□□□□□ -0.82
SNPH-202ENST00000381873 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
SNPH-202ENST00000381873 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
SNPH-202ENST00000381873 CFAP46Q8IYW2 2715 aa9.94□□□□□ -0.82
SNPH-202ENST00000381873 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
SNPH-202ENST00000381873 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
SNPH-202ENST00000381873 A0A1B0GU69 56 aa9.92□□□□□ -0.82
SNPH-202ENST00000381873 KRTAP10-11P60412 298 aa9.92□□□□□ -0.82
SNPH-202ENST00000381873 FAM168BA1KXE4 195 aa9.92□□□□□ -0.82
SNPH-202ENST00000381873 TRIOO75962 3097 aa9.91□□□□□ -0.82
SNPH-202ENST00000381873 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
SNPH-202ENST00000381873 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
SNPH-202ENST00000381873 PRUNE2Q8WUY3 3088 aa9.9□□□□□ -0.82
SNPH-202ENST00000381873 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
SNPH-202ENST00000381873 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
SNPH-202ENST00000381873 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
SNPH-202ENST00000381873 GIG44P09565 113 aaPredicted RBP9.88□□□□□ -0.83
SNPH-202ENST00000381873 LINC00612Q8N6U2 182 aa9.87□□□□□ -0.83
SNPH-202ENST00000381873 Q96NJ1 140 aa9.87□□□□□ -0.83
SNPH-202ENST00000381873 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
SNPH-202ENST00000381873 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
SNPH-202ENST00000381873 J3QL48 77 aa9.86□□□□□ -0.83
SNPH-202ENST00000381873 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SNPH-202ENST00000381873 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
SNPH-202ENST00000381873 AKAP13Q12802 2813 aa9.85□□□□□ -0.83
SNPH-202ENST00000381873 A8MWP4 228 aa9.84□□□□□ -0.83
SNPH-202ENST00000381873 KRTAP10-3P60369 221 aa9.84□□□□□ -0.83
SNPH-202ENST00000381873 TM2D3Q9BRN9 247 aa9.84□□□□□ -0.83
SNPH-202ENST00000381873 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
SNPH-202ENST00000381873 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
SNPH-202ENST00000381873 LOC101927531A0A1B0GV80 90 aa9.82□□□□□ -0.84
SNPH-202ENST00000381873 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
SNPH-202ENST00000381873 SSBP3-AS1Q7Z2R9 100 aa9.81□□□□□ -0.84
SNPH-202ENST00000381873 A0A087WTM6 91 aa9.81□□□□□ -0.84
SNPH-202ENST00000381873 ZNF861PO60384 105 aa9.81□□□□□ -0.84
SNPH-202ENST00000381873 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
SNPH-202ENST00000381873 SZT2Q5T011 3432 aa9.8□□□□□ -0.84
SNPH-202ENST00000381873 TEP1Q99973 2627 aaKnown RBP9.8□□□□□ -0.84
SNPH-202ENST00000381873 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
SNPH-202ENST00000381873 K7EQZ3 153 aa9.78□□□□□ -0.84
SNPH-202ENST00000381873 IGFL1Q6UW32 110 aa9.76□□□□□ -0.85
SNPH-202ENST00000381873 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
SNPH-202ENST00000381873 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
SNPH-202ENST00000381873 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
SNPH-202ENST00000381873 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
SNPH-202ENST00000381873 LAMA1P25391 3075 aa9.73□□□□□ -0.85
SNPH-202ENST00000381873 Q8N377 158 aa9.73□□□□□ -0.85
SNPH-202ENST00000381873 WIPF1O43516 503 aa9.72□□□□□ -0.85
SNPH-202ENST00000381873 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
SNPH-202ENST00000381873 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.85
SNPH-202ENST00000381873 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
SNPH-202ENST00000381873 PRR15Q8IV56 129 aa9.71□□□□□ -0.85
SNPH-202ENST00000381873 DNAH14Q0VDD8 3507 aa9.71□□□□□ -0.85
SNPH-202ENST00000381873 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.85
SNPH-202ENST00000381873 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.85
SNPH-202ENST00000381873 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
SNPH-202ENST00000381873 CFAP54Q96N23 3096 aa9.7□□□□□ -0.86
SNPH-202ENST00000381873 COX6B2Q6YFQ2 88 aa9.69□□□□□ -0.86
SNPH-202ENST00000381873 C4orf26Q17RF5 130 aa9.69□□□□□ -0.86
SNPH-202ENST00000381873 APLNQ9ULZ1 77 aa9.68□□□□□ -0.86
SNPH-202ENST00000381873 LINC00336Q6ZUF6 198 aa9.68□□□□□ -0.86
SNPH-202ENST00000381873 DSCR10P59022 87 aa9.68□□□□□ -0.86
SNPH-202ENST00000381873 TEX15Q9BXT5 2789 aa9.67□□□□□ -0.86
SNPH-202ENST00000381873 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
SNPH-202ENST00000381873 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
SNPH-202ENST00000381873 MGAQ8IWI9 3026 aa9.66□□□□□ -0.86
SNPH-202ENST00000381873 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
SNPH-202ENST00000381873 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
SNPH-202ENST00000381873 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
SNPH-202ENST00000381873 CNBPP62633 177 aaKnown RBP9.65□□□□□ -0.86
SNPH-202ENST00000381873 OBSCN-AS1Q96MR7 158 aa9.65□□□□□ -0.86
SNPH-202ENST00000381873 CASC10Q5T4H9 136 aa9.65□□□□□ -0.87
SNPH-202ENST00000381873 COL6A5A8TX70 2615 aa9.65□□□□□ -0.87
SNPH-202ENST00000381873 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
SNPH-202ENST00000381873 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
SNPH-202ENST00000381873 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
SNPH-202ENST00000381873 ANAPC11Q9NYG5 84 aa9.64□□□□□ -0.87
SNPH-202ENST00000381873 VCANP13611 3396 aa9.63□□□□□ -0.87
SNPH-202ENST00000381873 A0A0G2JQZ4 141 aa9.63□□□□□ -0.87
SNPH-202ENST00000381873 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
SNPH-202ENST00000381873 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
SNPH-202ENST00000381873 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
SNPH-202ENST00000381873 COA5Q86WW8 74 aa9.61□□□□□ -0.87
SNPH-202ENST00000381873 REV3LO60673 3130 aa9.6□□□□□ -0.87
SNPH-202ENST00000381873 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
SNPH-202ENST00000381873 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
SNPH-202ENST00000381873 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
SNPH-202ENST00000381873 IGSF10Q6WRI0 2623 aa9.59□□□□□ -0.87
SNPH-202ENST00000381873 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
SNPH-202ENST00000381873 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
SNPH-202ENST00000381873 UQCR11O14957 56 aa9.56□□□□□ -0.88
SNPH-202ENST00000381873 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
SNPH-202ENST00000381873 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
SNPH-202ENST00000381873 A8MUN3 132 aa9.54□□□□□ -0.88
SNPH-202ENST00000381873 CYP4F30PQ9H0H9 118 aa9.53□□□□□ -0.88
SNPH-202ENST00000381873 CR1P17927 2039 aa9.53□□□□□ -0.88
SNPH-202ENST00000381873 SPTBN5Q9NRC6 3674 aaKnown RBP9.52□□□□□ -0.89
SNPH-202ENST00000381873 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
SNPH-202ENST00000381873 TNP2Q05952 138 aa9.5□□□□□ -0.89
SNPH-202ENST00000381873 TNRC18O15417 2968 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms