RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
SMN1-202ENST00000380707 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
SMN1-202ENST00000380707 KRTAP5-3Q6L8H2 238 aa7.78□□□□□ -1.16
SMN1-202ENST00000380707 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
SMN1-202ENST00000380707 PRO1933Q9H354 126 aa7.78□□□□□ -1.16
SMN1-202ENST00000380707 UQCR10Q9UDW1 63 aa7.78□□□□□ -1.16
SMN1-202ENST00000380707 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 DDTP30046 118 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 LINC00518Q8N0U6 118 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 LINC00337Q8N6G1 96 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 C12orf57Q99622 126 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
SMN1-202ENST00000380707 A4D1N5 150 aa7.76□□□□□ -1.17
SMN1-202ENST00000380707 GHRHP01286 108 aa7.76□□□□□ -1.17
SMN1-202ENST00000380707 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
SMN1-202ENST00000380707 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
SMN1-202ENST00000380707 BCE1O60756 84 aa7.75□□□□□ -1.17
SMN1-202ENST00000380707 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
SMN1-202ENST00000380707 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
SMN1-202ENST00000380707 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
SMN1-202ENST00000380707 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
SMN1-202ENST00000380707 OR13C6PQ8NH95 151 aa7.74□□□□□ -1.17
SMN1-202ENST00000380707 PRYO14603 147 aa7.73□□□□□ -1.17
SMN1-202ENST00000380707 TAL2Q16559 108 aa7.73□□□□□ -1.17
SMN1-202ENST00000380707 CEND1Q8N111 149 aa7.73□□□□□ -1.17
SMN1-202ENST00000380707 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
SMN1-202ENST00000380707 A6NDN8 102 aa7.72□□□□□ -1.17
SMN1-202ENST00000380707 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
SMN1-202ENST00000380707 SPRR1AP35321 89 aa7.72□□□□□ -1.17
SMN1-202ENST00000380707 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.18
SMN1-202ENST00000380707 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
SMN1-202ENST00000380707 ZNF861PO60384 105 aa7.71□□□□□ -1.18
SMN1-202ENST00000380707 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
SMN1-202ENST00000380707 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.18
SMN1-202ENST00000380707 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.18
SMN1-202ENST00000380707 TRAV13-2A0A0B4J235 113 aa7.7□□□□□ -1.18
SMN1-202ENST00000380707 PRLHP81277 87 aa7.7□□□□□ -1.18
SMN1-202ENST00000380707 HSD52Q0P140 79 aa7.7□□□□□ -1.18
SMN1-202ENST00000380707 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
SMN1-202ENST00000380707 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
SMN1-202ENST00000380707 CFC1BP0CG36 223 aa7.69□□□□□ -1.18
SMN1-202ENST00000380707 CFC1P0CG37 223 aa7.69□□□□□ -1.18
SMN1-202ENST00000380707 UBE2AP49459 152 aa7.69□□□□□ -1.18
SMN1-202ENST00000380707 FXYD2P54710 66 aa7.69□□□□□ -1.18
SMN1-202ENST00000380707 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
SMN1-202ENST00000380707 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
SMN1-202ENST00000380707 TSTD3H0UI37 97 aa7.68□□□□□ -1.18
SMN1-202ENST00000380707 CBY1Q9Y3M2 126 aa7.68□□□□□ -1.18
SMN1-202ENST00000380707 B5MCH6 92 aa7.67□□□□□ -1.18
SMN1-202ENST00000380707 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
SMN1-202ENST00000380707 H0Y9J4 135 aa7.66□□□□□ -1.18
SMN1-202ENST00000380707 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
SMN1-202ENST00000380707 CTAG1AP78358 180 aa7.66□□□□□ -1.18
SMN1-202ENST00000380707 SMIM11BQ8TCY0 68 aa7.66□□□□□ -1.18
SMN1-202ENST00000380707 TNXBP22105 4242 aa7.65□□□□□ -1.18
SMN1-202ENST00000380707 A0A0B4J2C4 111 aa7.65□□□□□ -1.18
SMN1-202ENST00000380707 C6orf99Q4VX62 202 aa7.65□□□□□ -1.18
SMN1-202ENST00000380707 RAB37Q96AX2 223 aa7.65□□□□□ -1.18
SMN1-202ENST00000380707 Q6ZRX8 168 aa7.64□□□□□ -1.19
SMN1-202ENST00000380707 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
SMN1-202ENST00000380707 BVES-AS1Q5T3Y7 98 aa7.63□□□□□ -1.19
SMN1-202ENST00000380707 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
SMN1-202ENST00000380707 Q9BRP9 147 aa7.63□□□□□ -1.19
SMN1-202ENST00000380707 HIGD2AQ9BW72 106 aa7.63□□□□□ -1.19
SMN1-202ENST00000380707 H7C2G1 150 aa7.62□□□□□ -1.19
SMN1-202ENST00000380707 HINT1P49773 126 aaPredicted RBP7.62□□□□□ -1.19
SMN1-202ENST00000380707 NHP2Q9NX24 153 aaKnown RBP7.62□□□□□ -1.19
SMN1-202ENST00000380707 K7ERJ3 54 aa7.62□□□□□ -1.19
SMN1-202ENST00000380707 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
SMN1-202ENST00000380707 PRO1854Q9UHT4 67 aa7.62□□□□□ -1.19
SMN1-202ENST00000380707 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
SMN1-202ENST00000380707 COX7BP24311 80 aa7.61□□□□□ -1.19
SMN1-202ENST00000380707 A0A1B0GWB2 263 aa7.6□□□□□ -1.19
SMN1-202ENST00000380707 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
SMN1-202ENST00000380707 KRTAP1-4P0C5Y4 121 aa7.6□□□□□ -1.19
SMN1-202ENST00000380707 M0R143 59 aa7.57□□□□□ -1.2
SMN1-202ENST00000380707 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
SMN1-202ENST00000380707 Q1RN00 199 aa7.57□□□□□ -1.2
SMN1-202ENST00000380707 LINC01600Q96MT4 127 aa7.57□□□□□ -1.2
SMN1-202ENST00000380707 DHRS4-AS1Q9P1J3 65 aa7.57□□□□□ -1.2
SMN1-202ENST00000380707 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
SMN1-202ENST00000380707 OXTP01178 125 aa7.56□□□□□ -1.2
SMN1-202ENST00000380707 VAMP3Q15836 100 aa7.56□□□□□ -1.2
SMN1-202ENST00000380707 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
SMN1-202ENST00000380707 HERC1Q15751 4861 aa7.56□□□□□ -1.2
SMN1-202ENST00000380707 TSPAN13O95857 204 aa7.54□□□□□ -1.2
SMN1-202ENST00000380707 ST20-AS1Q8NBB2 130 aa7.54□□□□□ -1.2
SMN1-202ENST00000380707 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
SMN1-202ENST00000380707 LINC00575Q6W349 94 aa7.53□□□□□ -1.2
SMN1-202ENST00000380707 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
SMN1-202ENST00000380707 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
SMN1-202ENST00000380707 A0A087X002 238 aa7.52□□□□□ -1.2
SMN1-202ENST00000380707 TRIAP1O43715 76 aa7.52□□□□□ -1.2
SMN1-202ENST00000380707 MT1HL1P0DM35 61 aa7.52□□□□□ -1.2
SMN1-202ENST00000380707 BATFQ16520 125 aa7.52□□□□□ -1.2
SMN1-202ENST00000380707 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
SMN1-202ENST00000380707 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
SMN1-202ENST00000380707 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
SMN1-202ENST00000380707 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms