RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 IGKV4-1P06312 121 aa11.89□□□□□ -0.51
UBL3-201ENST00000380680 DMDP11532 3685 aa11.89□□□□□ -0.51
UBL3-201ENST00000380680 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
UBL3-201ENST00000380680 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
UBL3-201ENST00000380680 Q8N9L7 120 aa11.88□□□□□ -0.51
UBL3-201ENST00000380680 LAMA5O15230 3695 aa11.88□□□□□ -0.51
UBL3-201ENST00000380680 IGLV6-57P01721 117 aa11.88□□□□□ -0.51
UBL3-201ENST00000380680 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
UBL3-201ENST00000380680 DCHS1Q96JQ0 3298 aa11.88□□□□□ -0.51
UBL3-201ENST00000380680 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
UBL3-201ENST00000380680 RELNP78509 3460 aa11.87□□□□□ -0.51
UBL3-201ENST00000380680 DEFB116Q30KQ4 102 aa11.87□□□□□ -0.51
UBL3-201ENST00000380680 NSD1Q96L73 2696 aaPredicted RBP11.87□□□□□ -0.51
UBL3-201ENST00000380680 K7EIL1 84 aa11.86□□□□□ -0.51
UBL3-201ENST00000380680 TRBV7-6A0A0J9YX20 115 aa11.86□□□□□ -0.51
UBL3-201ENST00000380680 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 NDUFC1O43677 76 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 Q6ZQT0 140 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 CELSR2Q9HCU4 2923 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 PRR4Q16378 134 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
UBL3-201ENST00000380680 C15orf56Q8N910 161 aa11.82□□□□□ -0.52
UBL3-201ENST00000380680 Q6ZRX8 168 aa11.81□□□□□ -0.52
UBL3-201ENST00000380680 C1orf134Q5TEV5 83 aa11.81□□□□□ -0.52
UBL3-201ENST00000380680 BAHCC1Q9P281 2608 aa11.81□□□□□ -0.52
UBL3-201ENST00000380680 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
UBL3-201ENST00000380680 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
UBL3-201ENST00000380680 CXCL6P80162 114 aa11.8□□□□□ -0.52
UBL3-201ENST00000380680 FBN2P35556 2912 aa11.8□□□□□ -0.52
UBL3-201ENST00000380680 SERTAD4-AS1Q5TG53 156 aa11.79□□□□□ -0.52
UBL3-201ENST00000380680 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
UBL3-201ENST00000380680 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
UBL3-201ENST00000380680 CHTF8P0CG12 524 aa11.77□□□□□ -0.53
UBL3-201ENST00000380680 HIVEP1P15822 2718 aa11.77□□□□□ -0.53
UBL3-201ENST00000380680 LOC110117498A0A087WWA1 95 aa11.77□□□□□ -0.53
UBL3-201ENST00000380680 PHF5AQ7RTV0 110 aaKnown RBP11.76□□□□□ -0.53
UBL3-201ENST00000380680 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
UBL3-201ENST00000380680 CHKB-CPT1BH3BT56 60 aa11.75□□□□□ -0.53
UBL3-201ENST00000380680 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
UBL3-201ENST00000380680 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
UBL3-201ENST00000380680 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
UBL3-201ENST00000380680 LINC00528Q8N1L1 170 aa11.73□□□□□ -0.53
UBL3-201ENST00000380680 LINC00208Q96KT6 92 aa11.73□□□□□ -0.53
UBL3-201ENST00000380680 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
UBL3-201ENST00000380680 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
UBL3-201ENST00000380680 Q8NBF4 154 aa11.7□□□□□ -0.54
UBL3-201ENST00000380680 ATP5EP56381 51 aaPredicted RBP11.7□□□□□ -0.54
UBL3-201ENST00000380680 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
UBL3-201ENST00000380680 TM2D3Q9BRN9 247 aa11.7□□□□□ -0.54
UBL3-201ENST00000380680 LINC00476Q8WZB0 136 aa11.69□□□□□ -0.54
UBL3-201ENST00000380680 ZFHX4Q86UP3 3567 aa11.68□□□□□ -0.54
UBL3-201ENST00000380680 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
UBL3-201ENST00000380680 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
UBL3-201ENST00000380680 IGHV6-1A0A0B4J1U7 121 aa11.67□□□□□ -0.54
UBL3-201ENST00000380680 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
UBL3-201ENST00000380680 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
UBL3-201ENST00000380680 BRK1Q8WUW1 75 aa11.65□□□□□ -0.54
UBL3-201ENST00000380680 HCG22E2RYF7 251 aa11.65□□□□□ -0.54
UBL3-201ENST00000380680 CRYGAP11844 174 aa11.65□□□□□ -0.54
UBL3-201ENST00000380680 WIPF1O43516 503 aa11.65□□□□□ -0.54
UBL3-201ENST00000380680 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
UBL3-201ENST00000380680 SMIM29Q86T20 159 aa11.64□□□□□ -0.55
UBL3-201ENST00000380680 A0A1B0GW54 56 aa11.6□□□□□ -0.55
UBL3-201ENST00000380680 SERP1Q9Y6X1 66 aa11.59□□□□□ -0.55
UBL3-201ENST00000380680 RTL8CO15255 209 aa11.59□□□□□ -0.55
UBL3-201ENST00000380680 Q8N377 158 aa11.59□□□□□ -0.55
UBL3-201ENST00000380680 SMIM26A0A096LP01 95 aa11.58□□□□□ -0.56
UBL3-201ENST00000380680 MOBPQ13875 183 aa11.58□□□□□ -0.56
UBL3-201ENST00000380680 TLX1NBP0CAT3 122 aa11.57□□□□□ -0.56
UBL3-201ENST00000380680 BCE1O60756 84 aa11.56□□□□□ -0.56
UBL3-201ENST00000380680 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
UBL3-201ENST00000380680 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
UBL3-201ENST00000380680 H0Y9P7 68 aa11.55□□□□□ -0.56
UBL3-201ENST00000380680 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
UBL3-201ENST00000380680 A0A0G2JQZ4 141 aa11.51□□□□□ -0.57
UBL3-201ENST00000380680 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
UBL3-201ENST00000380680 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
UBL3-201ENST00000380680 Q8NDZ9 215 aa11.51□□□□□ -0.57
UBL3-201ENST00000380680 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
UBL3-201ENST00000380680 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
UBL3-201ENST00000380680 ERC2-IT1O76042 136 aa11.49□□□□□ -0.57
UBL3-201ENST00000380680 STAB2Q8WWQ8 2551 aa11.49□□□□□ -0.57
UBL3-201ENST00000380680 APLNQ9ULZ1 77 aa11.48□□□□□ -0.57
UBL3-201ENST00000380680 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
UBL3-201ENST00000380680 OBSCN-AS1Q96MR7 158 aa11.47□□□□□ -0.57
UBL3-201ENST00000380680 IGFL1Q6UW32 110 aa11.46□□□□□ -0.58
UBL3-201ENST00000380680 K7EQZ3 153 aa11.45□□□□□ -0.58
UBL3-201ENST00000380680 C1orf64Q8NEQ6 169 aa11.44□□□□□ -0.58
UBL3-201ENST00000380680 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
UBL3-201ENST00000380680 V9GYY9 64 aa11.44□□□□□ -0.58
UBL3-201ENST00000380680 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
UBL3-201ENST00000380680 hDV103S1A0JD37 113 aa11.43□□□□□ -0.58
UBL3-201ENST00000380680 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
UBL3-201ENST00000380680 A0A087WTM6 91 aa11.41□□□□□ -0.58
UBL3-201ENST00000380680 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
UBL3-201ENST00000380680 A0A1W2PNM2 257 aa11.39□□□□□ -0.59
UBL3-201ENST00000380680 WWC2-AS2Q96NR7 200 aa11.39□□□□□ -0.59
UBL3-201ENST00000380680 SMG1Q96Q15 3661 aaKnown RBP11.37□□□□□ -0.59
UBL3-201ENST00000380680 SEC61GP60059 68 aa11.36□□□□□ -0.59
UBL3-201ENST00000380680 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms