RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 Q6ZRP5 223 aa7.6□□□□□ -1.19
SMAD9-202ENST00000379826 CR1P17927 2039 aa7.59□□□□□ -1.19
SMAD9-202ENST00000379826 LINC00612Q8N6U2 182 aa7.59□□□□□ -1.19
SMAD9-202ENST00000379826 VPREB1P12018 145 aa7.59□□□□□ -1.19
SMAD9-202ENST00000379826 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.19
SMAD9-202ENST00000379826 COL12A1Q99715 3063 aa7.59□□□□□ -1.19
SMAD9-202ENST00000379826 FAM168BA1KXE4 195 aa7.58□□□□□ -1.2
SMAD9-202ENST00000379826 REG3GQ6UW15 175 aa7.58□□□□□ -1.2
SMAD9-202ENST00000379826 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
SMAD9-202ENST00000379826 H7BZZ5 65 aa7.56□□□□□ -1.2
SMAD9-202ENST00000379826 MRPL55Q7Z7F7 128 aaKnown RBP7.56□□□□□ -1.2
SMAD9-202ENST00000379826 GVQW2A0A096LPI5 108 aaPredicted RBP7.56□□□□□ -1.2
SMAD9-202ENST00000379826 HELZ2Q9BYK8 2649 aaKnown RBP7.56□□□□□ -1.2
SMAD9-202ENST00000379826 PRLHP81277 87 aa7.55□□□□□ -1.2
SMAD9-202ENST00000379826 PSPHP1O15172 72 aa7.54□□□□□ -1.2
SMAD9-202ENST00000379826 ZNF706Q9Y5V0 76 aaPredicted RBP7.54□□□□□ -1.2
SMAD9-202ENST00000379826 ACANP16112 2415 aa7.54□□□□□ -1.2
SMAD9-202ENST00000379826 BCE1O60756 84 aa7.54□□□□□ -1.2
SMAD9-202ENST00000379826 CENPEQ02224 2701 aa7.53□□□□□ -1.2
SMAD9-202ENST00000379826 NDUFB1O75438 58 aa7.53□□□□□ -1.2
SMAD9-202ENST00000379826 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
SMAD9-202ENST00000379826 C15orf56Q8N910 161 aa7.53□□□□□ -1.2
SMAD9-202ENST00000379826 A0A087WSZ3 146 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 KRTAP1-1Q07627 177 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 CELSR1Q9NYQ6 3014 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 TRBV7-4A0A0J9YYF1 115 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
SMAD9-202ENST00000379826 C1orf195Q5TG92 126 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 CHD6Q8TD26 2715 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
SMAD9-202ENST00000379826 IGKV4-1P06312 121 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 Q6ZRX8 168 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
SMAD9-202ENST00000379826 OXTP01178 125 aa7.49□□□□□ -1.21
SMAD9-202ENST00000379826 Q9BRP9 147 aa7.49□□□□□ -1.21
SMAD9-202ENST00000379826 IGLV9-49A0A0B4J1Y8 123 aa7.49□□□□□ -1.21
SMAD9-202ENST00000379826 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
SMAD9-202ENST00000379826 K7EQZ3 153 aa7.47□□□□□ -1.21
SMAD9-202ENST00000379826 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
SMAD9-202ENST00000379826 Q8N377 158 aa7.47□□□□□ -1.21
SMAD9-202ENST00000379826 Q5XG85 94 aa7.46□□□□□ -1.21
SMAD9-202ENST00000379826 V9GYY9 64 aa7.46□□□□□ -1.21
SMAD9-202ENST00000379826 F8WDY8 70 aa7.46□□□□□ -1.22
SMAD9-202ENST00000379826 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.22
SMAD9-202ENST00000379826 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
SMAD9-202ENST00000379826 KRTAP21-3Q3LHN1 58 aa7.45□□□□□ -1.22
SMAD9-202ENST00000379826 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
SMAD9-202ENST00000379826 WIPF1O43516 503 aa7.44□□□□□ -1.22
SMAD9-202ENST00000379826 Q8NBF4 154 aa7.44□□□□□ -1.22
SMAD9-202ENST00000379826 RTL8CO15255 209 aa7.44□□□□□ -1.22
SMAD9-202ENST00000379826 H0Y9P7 68 aa7.44□□□□□ -1.22
SMAD9-202ENST00000379826 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
SMAD9-202ENST00000379826 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
SMAD9-202ENST00000379826 UTP20O75691 2785 aaKnown RBP7.44□□□□□ -1.22
SMAD9-202ENST00000379826 TEX15Q9BXT5 2789 aa7.43□□□□□ -1.22
SMAD9-202ENST00000379826 H3BNG1 76 aa7.43□□□□□ -1.22
SMAD9-202ENST00000379826 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
SMAD9-202ENST00000379826 IGLV1-50A0A075B6I6 118 aa7.43□□□□□ -1.22
SMAD9-202ENST00000379826 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
SMAD9-202ENST00000379826 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
SMAD9-202ENST00000379826 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
SMAD9-202ENST00000379826 ITPR1Q14643 2758 aa7.4□□□□□ -1.22
SMAD9-202ENST00000379826 ERC2-IT1O76042 136 aa7.4□□□□□ -1.23
SMAD9-202ENST00000379826 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
SMAD9-202ENST00000379826 CRYBG3Q68DQ2 2970 aa7.39□□□□□ -1.23
SMAD9-202ENST00000379826 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
SMAD9-202ENST00000379826 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
SMAD9-202ENST00000379826 CIRBP-AS1Q8TBR5 109 aa7.38□□□□□ -1.23
SMAD9-202ENST00000379826 CUBNO60494 3623 aa7.38□□□□□ -1.23
SMAD9-202ENST00000379826 A0A1W2PNM2 257 aa7.38□□□□□ -1.23
SMAD9-202ENST00000379826 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
SMAD9-202ENST00000379826 A6NED7 52 aa7.38□□□□□ -1.23
SMAD9-202ENST00000379826 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
SMAD9-202ENST00000379826 ITPR3Q14573 2671 aa7.37□□□□□ -1.23
SMAD9-202ENST00000379826 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
SMAD9-202ENST00000379826 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
SMAD9-202ENST00000379826 C1orf64Q8NEQ6 169 aa7.36□□□□□ -1.23
SMAD9-202ENST00000379826 NBEAL2Q6ZNJ1 2754 aa7.36□□□□□ -1.23
SMAD9-202ENST00000379826 FLNCQ14315 2725 aa7.36□□□□□ -1.23
SMAD9-202ENST00000379826 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
SMAD9-202ENST00000379826 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
SMAD9-202ENST00000379826 ZANQ9Y493 2812 aa7.35□□□□□ -1.23
SMAD9-202ENST00000379826 GCN1Q92616 2671 aaKnown RBP7.35□□□□□ -1.23
SMAD9-202ENST00000379826 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
SMAD9-202ENST00000379826 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.23
SMAD9-202ENST00000379826 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.24
SMAD9-202ENST00000379826 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
SMAD9-202ENST00000379826 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
SMAD9-202ENST00000379826 A0A1B0GW54 56 aa7.32□□□□□ -1.24
SMAD9-202ENST00000379826 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms