RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
HIPK3-202ENST00000379016 LINC00310P59036 64 aa8.87□□□□□ -0.99
HIPK3-202ENST00000379016 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
HIPK3-202ENST00000379016 A0A096LNJ9 63 aa8.85□□□□□ -0.99
HIPK3-202ENST00000379016 KRTAP24-1Q3LI83 254 aa8.85□□□□□ -0.99
HIPK3-202ENST00000379016 ZNF861PO60384 105 aa8.84□□□□□ -0.99
HIPK3-202ENST00000379016 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
HIPK3-202ENST00000379016 NAV2Q8IVL1 2488 aa8.83□□□□□ -1
HIPK3-202ENST00000379016 SMCPP49901 116 aaPredicted RBP8.82□□□□□ -1
HIPK3-202ENST00000379016 H3BS24 57 aa8.82□□□□□ -1
HIPK3-202ENST00000379016 SPINK7P58062 85 aa8.81□□□□□ -1
HIPK3-202ENST00000379016 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
HIPK3-202ENST00000379016 H3BNG1 76 aa8.8□□□□□ -1
HIPK3-202ENST00000379016 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
HIPK3-202ENST00000379016 C15orf56Q8N910 161 aa8.8□□□□□ -1
HIPK3-202ENST00000379016 ABCA12Q86UK0 2595 aa8.79□□□□□ -1
HIPK3-202ENST00000379016 HRES1P13985 223 aa8.78□□□□□ -1
HIPK3-202ENST00000379016 LTBP2Q14767 1821 aa8.76□□□□□ -1.01
HIPK3-202ENST00000379016 A0A1B0GU33 70 aa8.75□□□□□ -1.01
HIPK3-202ENST00000379016 C9orf163Q8N9P6 203 aa8.75□□□□□ -1.01
HIPK3-202ENST00000379016 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
HIPK3-202ENST00000379016 Q8NAQ8 132 aa8.73□□□□□ -1.01
HIPK3-202ENST00000379016 IGF2RP11717 2491 aa8.73□□□□□ -1.01
HIPK3-202ENST00000379016 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
HIPK3-202ENST00000379016 IGLV7-43P04211 117 aa8.71□□□□□ -1.01
HIPK3-202ENST00000379016 NCOR2Q9Y618 2525 aa8.71□□□□□ -1.02
HIPK3-202ENST00000379016 S4R3F8 94 aa8.7□□□□□ -1.02
HIPK3-202ENST00000379016 COX8CQ7Z4L0 72 aa8.69□□□□□ -1.02
HIPK3-202ENST00000379016 Q8N377 158 aa8.69□□□□□ -1.02
HIPK3-202ENST00000379016 A0A087WTM6 91 aa8.68□□□□□ -1.02
HIPK3-202ENST00000379016 USP9XQ93008 2570 aaPredicted RBP8.68□□□□□ -1.02
HIPK3-202ENST00000379016 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
HIPK3-202ENST00000379016 R4GN34 69 aa8.65□□□□□ -1.02
HIPK3-202ENST00000379016 WDR87Q6ZQQ6 2873 aa8.64□□□□□ -1.03
HIPK3-202ENST00000379016 SETD2Q9BYW2 2564 aaPredicted RBP8.62□□□□□ -1.03
HIPK3-202ENST00000379016 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
HIPK3-202ENST00000379016 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
HIPK3-202ENST00000379016 MTORP42345 2549 aa8.6□□□□□ -1.03
HIPK3-202ENST00000379016 Q5VSD8 79 aa8.6□□□□□ -1.03
HIPK3-202ENST00000379016 LITAFQ99732 161 aa8.6□□□□□ -1.03
HIPK3-202ENST00000379016 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
HIPK3-202ENST00000379016 PRAC1Q96KF2 57 aa8.59□□□□□ -1.03
HIPK3-202ENST00000379016 H7BZZ5 65 aa8.58□□□□□ -1.04
HIPK3-202ENST00000379016 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
HIPK3-202ENST00000379016 SPTBN4Q9H254 2564 aa8.58□□□□□ -1.04
HIPK3-202ENST00000379016 ANKRD17O75179 2603 aaKnown RBP8.58□□□□□ -1.04
HIPK3-202ENST00000379016 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
HIPK3-202ENST00000379016 BPTFQ12830 3046 aa8.57□□□□□ -1.04
HIPK3-202ENST00000379016 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
HIPK3-202ENST00000379016 K7EIL1 84 aa8.56□□□□□ -1.04
HIPK3-202ENST00000379016 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
HIPK3-202ENST00000379016 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
HIPK3-202ENST00000379016 SPANXA2-OT1Q8N9U9 137 aa8.54□□□□□ -1.04
HIPK3-202ENST00000379016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
HIPK3-202ENST00000379016 USP24Q9UPU5 2620 aa8.49□□□□□ -1.05
HIPK3-202ENST00000379016 MUC22E2RYF6 1773 aaPredicted RBP8.49□□□□□ -1.05
HIPK3-202ENST00000379016 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
HIPK3-202ENST00000379016 EPG5Q9HCE0 2579 aa8.45□□□□□ -1.06
HIPK3-202ENST00000379016 CENPFP49454 3210 aa8.45□□□□□ -1.06
HIPK3-202ENST00000379016 CASC10Q5T4H9 136 aa8.45□□□□□ -1.06
HIPK3-202ENST00000379016 POLQO75417 2590 aa8.45□□□□□ -1.06
HIPK3-202ENST00000379016 M0QZ58 72 aa8.45□□□□□ -1.06
HIPK3-202ENST00000379016 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
HIPK3-202ENST00000379016 A0A1W2PNM2 257 aa8.4□□□□□ -1.06
HIPK3-202ENST00000379016 TNP2Q05952 138 aa8.4□□□□□ -1.06
HIPK3-202ENST00000379016 ROMO1P60602 79 aa8.39□□□□□ -1.07
HIPK3-202ENST00000379016 EIF4EBP3O60516 100 aaPredicted RBP8.39□□□□□ -1.07
HIPK3-202ENST00000379016 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
HIPK3-202ENST00000379016 Q75L30 129 aa8.37□□□□□ -1.07
HIPK3-202ENST00000379016 GOLGB1Q14789 3259 aaKnown RBP8.37□□□□□ -1.07
HIPK3-202ENST00000379016 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
HIPK3-202ENST00000379016 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
HIPK3-202ENST00000379016 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
HIPK3-202ENST00000379016 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
HIPK3-202ENST00000379016 CHD8Q9HCK8 2581 aa8.34□□□□□ -1.07
HIPK3-202ENST00000379016 PRR34Q9NV39 138 aa8.33□□□□□ -1.08
HIPK3-202ENST00000379016 KLK9Q2XQG4 91 aa8.33□□□□□ -1.08
HIPK3-202ENST00000379016 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
HIPK3-202ENST00000379016 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
HIPK3-202ENST00000379016 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
HIPK3-202ENST00000379016 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
HIPK3-202ENST00000379016 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
HIPK3-202ENST00000379016 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
HIPK3-202ENST00000379016 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
HIPK3-202ENST00000379016 C10orf142B7Z368 130 aa8.26□□□□□ -1.09
HIPK3-202ENST00000379016 COL4A2P08572 1712 aa8.26□□□□□ -1.09
HIPK3-202ENST00000379016 USP9YO00507 2555 aaPredicted RBP8.25□□□□□ -1.09
HIPK3-202ENST00000379016 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
HIPK3-202ENST00000379016 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
HIPK3-202ENST00000379016 FASNP49327 2511 aaKnown RBP8.22□□□□□ -1.09
HIPK3-202ENST00000379016 Q8NDZ9 215 aa8.22□□□□□ -1.09
HIPK3-202ENST00000379016 Q5W150 140 aa8.2□□□□□ -1.1
HIPK3-202ENST00000379016 EP400Q96L91 3159 aa8.14□□□□□ -1.11
HIPK3-202ENST00000379016 Q5VV11 94 aa8.13□□□□□ -1.11
HIPK3-202ENST00000379016 ANKRD11Q6UB99 2663 aaPredicted RBP8.12□□□□□ -1.11
HIPK3-202ENST00000379016 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
HIPK3-202ENST00000379016 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
HIPK3-202ENST00000379016 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
HIPK3-202ENST00000379016 NDUFAF8A1L188 74 aa8.01□□□□□ -1.13
HIPK3-202ENST00000379016 MGAM2Q2M2H8 2515 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms