RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
TDP2-202ENST00000378198 IGLV5-37A0A075B6J1 123 aa11.8□□□□□ -0.52
TDP2-202ENST00000378198 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
TDP2-202ENST00000378198 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
TDP2-202ENST00000378198 PRYO14603 147 aa11.79□□□□□ -0.52
TDP2-202ENST00000378198 Q8N377 158 aa11.79□□□□□ -0.52
TDP2-202ENST00000378198 RMI2Q96E14 147 aa11.79□□□□□ -0.52
TDP2-202ENST00000378198 Q6ZRX8 168 aa11.78□□□□□ -0.52
TDP2-202ENST00000378198 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
TDP2-202ENST00000378198 IGLV1-50A0A075B6I6 118 aa11.77□□□□□ -0.52
TDP2-202ENST00000378198 IGLV5-48A0A075B6I7 105 aa11.77□□□□□ -0.52
TDP2-202ENST00000378198 KRTAP4-16G5E9R7 235 aaPredicted RBP11.76□□□□□ -0.53
TDP2-202ENST00000378198 SPRR1AP35321 89 aa11.76□□□□□ -0.53
TDP2-202ENST00000378198 NREPQ16612 68 aa11.76□□□□□ -0.53
TDP2-202ENST00000378198 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
TDP2-202ENST00000378198 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
TDP2-202ENST00000378198 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
TDP2-202ENST00000378198 FAM168BA1KXE4 195 aa11.74□□□□□ -0.53
TDP2-202ENST00000378198 KLKP1Q107X0 134 aa11.74□□□□□ -0.53
TDP2-202ENST00000378198 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
TDP2-202ENST00000378198 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
TDP2-202ENST00000378198 Q9BRP9 147 aa11.73□□□□□ -0.53
TDP2-202ENST00000378198 A0A1B0GW54 56 aa11.72□□□□□ -0.53
TDP2-202ENST00000378198 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
TDP2-202ENST00000378198 KRTAP7-1Q8IUC3 87 aa11.71□□□□□ -0.54
TDP2-202ENST00000378198 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
TDP2-202ENST00000378198 H7BZZ5 65 aa11.7□□□□□ -0.54
TDP2-202ENST00000378198 IGKV4-1P06312 121 aa11.7□□□□□ -0.54
TDP2-202ENST00000378198 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
TDP2-202ENST00000378198 BPY2O14599 106 aa11.69□□□□□ -0.54
TDP2-202ENST00000378198 MRPL55Q7Z7F7 128 aaKnown RBP11.69□□□□□ -0.54
TDP2-202ENST00000378198 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
TDP2-202ENST00000378198 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
TDP2-202ENST00000378198 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
TDP2-202ENST00000378198 TNP2Q05952 138 aa11.67□□□□□ -0.54
TDP2-202ENST00000378198 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
TDP2-202ENST00000378198 OXTP01178 125 aa11.66□□□□□ -0.54
TDP2-202ENST00000378198 Q8N9L7 120 aa11.66□□□□□ -0.54
TDP2-202ENST00000378198 SNURFQ9Y675 71 aa11.66□□□□□ -0.54
TDP2-202ENST00000378198 PRB2P02812 416 aaPredicted RBP11.65□□□□□ -0.54
TDP2-202ENST00000378198 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
TDP2-202ENST00000378198 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
TDP2-202ENST00000378198 F8P00451 2351 aa11.64□□□□□ -0.55
TDP2-202ENST00000378198 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
TDP2-202ENST00000378198 ERC2-IT1O76042 136 aa11.64□□□□□ -0.55
TDP2-202ENST00000378198 ANK2Q01484 3957 aa11.63□□□□□ -0.55
TDP2-202ENST00000378198 NDUFC1O43677 76 aa11.63□□□□□ -0.55
TDP2-202ENST00000378198 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
TDP2-202ENST00000378198 K7EIL1 84 aa11.62□□□□□ -0.55
TDP2-202ENST00000378198 UBE2BP63146 152 aa11.62□□□□□ -0.55
TDP2-202ENST00000378198 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
TDP2-202ENST00000378198 Q8NBF4 154 aa11.62□□□□□ -0.55
TDP2-202ENST00000378198 F8WEM9 126 aa11.6□□□□□ -0.55
TDP2-202ENST00000378198 SPRR4Q96PI1 79 aa11.6□□□□□ -0.55
TDP2-202ENST00000378198 TMEM254Q8TBM7 123 aa11.58□□□□□ -0.56
TDP2-202ENST00000378198 OCR1Q9BZK8 76 aa11.58□□□□□ -0.56
TDP2-202ENST00000378198 SERP1Q9Y6X1 66 aa11.58□□□□□ -0.56
TDP2-202ENST00000378198 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
TDP2-202ENST00000378198 EPM2AB3EWF7 344 aa11.56□□□□□ -0.56
TDP2-202ENST00000378198 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
TDP2-202ENST00000378198 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
TDP2-202ENST00000378198 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
TDP2-202ENST00000378198 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
TDP2-202ENST00000378198 A0A096LNI7 61 aa11.53□□□□□ -0.56
TDP2-202ENST00000378198 ATP5EP56381 51 aaPredicted RBP11.53□□□□□ -0.56
TDP2-202ENST00000378198 STAB1Q9NY15 2570 aa11.52□□□□□ -0.56
TDP2-202ENST00000378198 FLNBO75369 2602 aaKnown RBP11.52□□□□□ -0.57
TDP2-202ENST00000378198 Q5XG85 94 aa11.51□□□□□ -0.57
TDP2-202ENST00000378198 C5orf47Q569G3 176 aa11.5□□□□□ -0.57
TDP2-202ENST00000378198 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
TDP2-202ENST00000378198 KRTAP1-5Q9BYS1 174 aa11.5□□□□□ -0.57
TDP2-202ENST00000378198 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
TDP2-202ENST00000378198 PSCAO43653 123 aa11.5□□□□□ -0.57
TDP2-202ENST00000378198 IGKV2-24A0A0C4DH68 120 aa11.48□□□□□ -0.57
TDP2-202ENST00000378198 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
TDP2-202ENST00000378198 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
TDP2-202ENST00000378198 DSCR10P59022 87 aa11.47□□□□□ -0.57
TDP2-202ENST00000378198 MAST4O15021 2626 aa11.47□□□□□ -0.57
TDP2-202ENST00000378198 PRLHP81277 87 aa11.45□□□□□ -0.58
TDP2-202ENST00000378198 C14orf177Q52M58 125 aa11.45□□□□□ -0.58
TDP2-202ENST00000378198 IGFL1Q6UW32 110 aa11.45□□□□□ -0.58
TDP2-202ENST00000378198 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
TDP2-202ENST00000378198 C4orf26Q17RF5 130 aa11.45□□□□□ -0.58
TDP2-202ENST00000378198 IGLV8-61A0A075B6I0 122 aa11.44□□□□□ -0.58
TDP2-202ENST00000378198 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
TDP2-202ENST00000378198 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
TDP2-202ENST00000378198 K7EQZ3 153 aa11.42□□□□□ -0.58
TDP2-202ENST00000378198 HIGD2AQ9BW72 106 aa11.42□□□□□ -0.58
TDP2-202ENST00000378198 LCE6AA0A183 80 aa11.41□□□□□ -0.58
TDP2-202ENST00000378198 BAHCC1Q9P281 2608 aa11.4□□□□□ -0.58
TDP2-202ENST00000378198 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
TDP2-202ENST00000378198 SMIM26A0A096LP01 95 aa11.4□□□□□ -0.58
TDP2-202ENST00000378198 A0A0G2JQZ4 141 aa11.38□□□□□ -0.59
TDP2-202ENST00000378198 H0Y9J4 135 aa11.38□□□□□ -0.59
TDP2-202ENST00000378198 NOTCH1P46531 2555 aa11.38□□□□□ -0.59
TDP2-202ENST00000378198 UBE2AP49459 152 aa11.37□□□□□ -0.59
TDP2-202ENST00000378198 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
TDP2-202ENST00000378198 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
TDP2-202ENST00000378198 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
TDP2-202ENST00000378198 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms