RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
TRIM13-202ENST00000378182 ACANP16112 2415 aa9.28□□□□□ -0.92
TRIM13-202ENST00000378182 USP9XQ93008 2570 aaPredicted RBP9.27□□□□□ -0.93
TRIM13-202ENST00000378182 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
TRIM13-202ENST00000378182 Q6ZSA8 131 aa9.26□□□□□ -0.93
TRIM13-202ENST00000378182 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
TRIM13-202ENST00000378182 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
TRIM13-202ENST00000378182 ZNF462Q96JM2 2506 aa9.25□□□□□ -0.93
TRIM13-202ENST00000378182 IGLV5-48A0A075B6I7 105 aa9.25□□□□□ -0.93
TRIM13-202ENST00000378182 UQCR11O14957 56 aa9.24□□□□□ -0.93
TRIM13-202ENST00000378182 A0A1B0GW54 56 aa9.24□□□□□ -0.93
TRIM13-202ENST00000378182 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
TRIM13-202ENST00000378182 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
TRIM13-202ENST00000378182 C19orf73Q9NVV2 129 aa9.22□□□□□ -0.93
TRIM13-202ENST00000378182 PRR15Q8IV56 129 aa9.21□□□□□ -0.93
TRIM13-202ENST00000378182 A8MUN3 132 aa9.2□□□□□ -0.94
TRIM13-202ENST00000378182 KCNQ1DNQ9H478 68 aa9.2□□□□□ -0.94
TRIM13-202ENST00000378182 USP9YO00507 2555 aaPredicted RBP9.19□□□□□ -0.94
TRIM13-202ENST00000378182 PRO0628Q9UI54 55 aa9.18□□□□□ -0.94
TRIM13-202ENST00000378182 PKD1L2Q7Z442 2459 aa9.17□□□□□ -0.94
TRIM13-202ENST00000378182 Q8N377 158 aa9.17□□□□□ -0.94
TRIM13-202ENST00000378182 TNP2Q05952 138 aa9.16□□□□□ -0.94
TRIM13-202ENST00000378182 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
TRIM13-202ENST00000378182 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
TRIM13-202ENST00000378182 DNAH12Q6ZR08 3092 aa9.14□□□□□ -0.95
TRIM13-202ENST00000378182 CR1P17927 2039 aa9.14□□□□□ -0.95
TRIM13-202ENST00000378182 ANKRD11Q6UB99 2663 aaPredicted RBP9.13□□□□□ -0.95
TRIM13-202ENST00000378182 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
TRIM13-202ENST00000378182 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
TRIM13-202ENST00000378182 BPTFQ12830 3046 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 CDC42SE1Q9NRR8 79 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 SPTBN4Q9H254 2564 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
TRIM13-202ENST00000378182 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
TRIM13-202ENST00000378182 LITAFQ99732 161 aa9.07□□□□□ -0.96
TRIM13-202ENST00000378182 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
TRIM13-202ENST00000378182 C5orf42Q9H799 3197 aa9.06□□□□□ -0.96
TRIM13-202ENST00000378182 CEP295Q9C0D2 2601 aa9.06□□□□□ -0.96
TRIM13-202ENST00000378182 PRR34Q9NV39 138 aa9.05□□□□□ -0.96
TRIM13-202ENST00000378182 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
TRIM13-202ENST00000378182 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
TRIM13-202ENST00000378182 LUZP6Q538Z0 58 aa9.04□□□□□ -0.96
TRIM13-202ENST00000378182 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
TRIM13-202ENST00000378182 POLQO75417 2590 aa9.02□□□□□ -0.97
TRIM13-202ENST00000378182 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
TRIM13-202ENST00000378182 LINC00483Q53H64 154 aa9□□□□□ -0.97
TRIM13-202ENST00000378182 MTORP42345 2549 aa8.99□□□□□ -0.97
TRIM13-202ENST00000378182 CYP4F30PQ9H0H9 118 aa8.98□□□□□ -0.97
TRIM13-202ENST00000378182 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.97
TRIM13-202ENST00000378182 A0A096LNT2 108 aa8.95□□□□□ -0.98
TRIM13-202ENST00000378182 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
TRIM13-202ENST00000378182 S4R3F8 94 aa8.95□□□□□ -0.98
TRIM13-202ENST00000378182 CHD8Q9HCK8 2581 aa8.94□□□□□ -0.98
TRIM13-202ENST00000378182 KRTAP1-3Q8IUG1 177 aa8.93□□□□□ -0.98
TRIM13-202ENST00000378182 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
TRIM13-202ENST00000378182 FASNP49327 2511 aaKnown RBP8.91□□□□□ -0.98
TRIM13-202ENST00000378182 CD164Q04900 197 aa8.9□□□□□ -0.98
TRIM13-202ENST00000378182 Q5VSD8 79 aa8.88□□□□□ -0.99
TRIM13-202ENST00000378182 A0A1W2PNM2 257 aa8.87□□□□□ -0.99
TRIM13-202ENST00000378182 USP24Q9UPU5 2620 aa8.86□□□□□ -0.99
TRIM13-202ENST00000378182 HRES1P13985 223 aa8.85□□□□□ -0.99
TRIM13-202ENST00000378182 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
TRIM13-202ENST00000378182 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
TRIM13-202ENST00000378182 A0A1B0GU33 70 aa8.82□□□□□ -1
TRIM13-202ENST00000378182 PRRC2CQ9Y520 2896 aaKnown RBP8.81□□□□□ -1
TRIM13-202ENST00000378182 PCNTO95613 3336 aa8.81□□□□□ -1
TRIM13-202ENST00000378182 WIPF1O43516 503 aa8.8□□□□□ -1
TRIM13-202ENST00000378182 CSAG1Q6PB30 78 aa8.8□□□□□ -1
TRIM13-202ENST00000378182 Q1T7F1 81 aa8.78□□□□□ -1
TRIM13-202ENST00000378182 KLK9Q2XQG4 91 aa8.78□□□□□ -1
TRIM13-202ENST00000378182 R4GN34 69 aa8.77□□□□□ -1.01
TRIM13-202ENST00000378182 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
TRIM13-202ENST00000378182 H7BZZ5 65 aa8.74□□□□□ -1.01
TRIM13-202ENST00000378182 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
TRIM13-202ENST00000378182 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
TRIM13-202ENST00000378182 KLKP1Q107X0 134 aa8.73□□□□□ -1.01
TRIM13-202ENST00000378182 LCA10Q71F78 164 aa8.72□□□□□ -1.01
TRIM13-202ENST00000378182 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
TRIM13-202ENST00000378182 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
TRIM13-202ENST00000378182 XIRP2A4UGR9 3374 aa8.68□□□□□ -1.02
TRIM13-202ENST00000378182 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
TRIM13-202ENST00000378182 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.02
TRIM13-202ENST00000378182 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
TRIM13-202ENST00000378182 SPINK7P58062 85 aa8.65□□□□□ -1.03
TRIM13-202ENST00000378182 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
TRIM13-202ENST00000378182 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
TRIM13-202ENST00000378182 M0QZ58 72 aa8.61□□□□□ -1.03
TRIM13-202ENST00000378182 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
TRIM13-202ENST00000378182 KRTAP10-1P60331 282 aa8.61□□□□□ -1.03
TRIM13-202ENST00000378182 LCE6AA0A183 80 aa8.58□□□□□ -1.04
TRIM13-202ENST00000378182 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
TRIM13-202ENST00000378182 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
TRIM13-202ENST00000378182 MGAM2Q2M2H8 2515 aa8.57□□□□□ -1.04
TRIM13-202ENST00000378182 Q5W150 140 aa8.56□□□□□ -1.04
TRIM13-202ENST00000378182 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
TRIM13-202ENST00000378182 EPG5Q9HCE0 2579 aa8.54□□□□□ -1.04
TRIM13-202ENST00000378182 OCR1Q9BZK8 76 aa8.54□□□□□ -1.04
TRIM13-202ENST00000378182 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms