RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 TM2D3Q9BRN9 247 aa13.5□□□□□ -0.25
SHB-201ENST00000377707 C6orf48Q9UBA6 75 aa13.49□□□□□ -0.25
SHB-201ENST00000377707 MIFP14174 115 aa13.48□□□□□ -0.25
SHB-201ENST00000377707 Q6ZQY7 126 aa13.48□□□□□ -0.25
SHB-201ENST00000377707 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
SHB-201ENST00000377707 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
SHB-201ENST00000377707 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
SHB-201ENST00000377707 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
SHB-201ENST00000377707 UBL5Q9BZL1 73 aa13.44□□□□□ -0.26
SHB-201ENST00000377707 MGAM2Q2M2H8 2515 aa13.44□□□□□ -0.26
SHB-201ENST00000377707 KTN1-AS1Q86SY8 53 aa13.43□□□□□ -0.26
SHB-201ENST00000377707 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
SHB-201ENST00000377707 A0A0J9YWU9 116 aa13.42□□□□□ -0.26
SHB-201ENST00000377707 IGLV6-57P01721 117 aa13.42□□□□□ -0.26
SHB-201ENST00000377707 MDFIQ99750 246 aa13.41□□□□□ -0.26
SHB-201ENST00000377707 Q6ZTC4 211 aa13.4□□□□□ -0.26
SHB-201ENST00000377707 TRBV7-4A0A0J9YYF1 115 aa13.39□□□□□ -0.27
SHB-201ENST00000377707 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
SHB-201ENST00000377707 Q6ZQT0 140 aa13.38□□□□□ -0.27
SHB-201ENST00000377707 CAMK2N2Q96S95 79 aa13.38□□□□□ -0.27
SHB-201ENST00000377707 PRB2P02812 416 aaPredicted RBP13.38□□□□□ -0.27
SHB-201ENST00000377707 HAMPP81172 84 aa13.37□□□□□ -0.27
SHB-201ENST00000377707 Q1T7F1 81 aa13.37□□□□□ -0.27
SHB-201ENST00000377707 H3BS24 57 aa13.36□□□□□ -0.27
SHB-201ENST00000377707 SCXQ7RTU7 201 aa13.36□□□□□ -0.27
SHB-201ENST00000377707 ZNF73O43830 326 aaPredicted RBP13.34□□□□□ -0.27
SHB-201ENST00000377707 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.27
SHB-201ENST00000377707 TMEM254Q8TBM7 123 aa13.33□□□□□ -0.27
SHB-201ENST00000377707 DIRC1Q969H9 104 aa13.33□□□□□ -0.27
SHB-201ENST00000377707 M0R378 163 aa13.31□□□□□ -0.28
SHB-201ENST00000377707 CSMD3Q7Z407 3707 aa13.31□□□□□ -0.28
SHB-201ENST00000377707 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
SHB-201ENST00000377707 LINC00588Q9Y4M8 146 aa13.3□□□□□ -0.28
SHB-201ENST00000377707 Q6ZRP5 223 aa13.3□□□□□ -0.28
SHB-201ENST00000377707 KRTAP26-1Q6PEX3 210 aa13.29□□□□□ -0.28
SHB-201ENST00000377707 LYSTQ99698 3801 aa13.29□□□□□ -0.28
SHB-201ENST00000377707 VPREB1P12018 145 aa13.29□□□□□ -0.28
SHB-201ENST00000377707 Q6ZVQ6 151 aa13.29□□□□□ -0.28
SHB-201ENST00000377707 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
SHB-201ENST00000377707 COX7BP24311 80 aa13.28□□□□□ -0.28
SHB-201ENST00000377707 LINC01547P58512 204 aaPredicted RBP13.28□□□□□ -0.28
SHB-201ENST00000377707 GVQW2A0A096LPI5 108 aaPredicted RBP13.27□□□□□ -0.29
SHB-201ENST00000377707 PSPHP1O15172 72 aa13.26□□□□□ -0.29
SHB-201ENST00000377707 ERC2-IT1O76042 136 aa13.26□□□□□ -0.29
SHB-201ENST00000377707 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
SHB-201ENST00000377707 MUC7Q8TAX7 377 aa13.26□□□□□ -0.29
SHB-201ENST00000377707 DNAH3Q8TD57 4116 aa13.25□□□□□ -0.29
SHB-201ENST00000377707 PRYO14603 147 aa13.25□□□□□ -0.29
SHB-201ENST00000377707 NREPQ16612 68 aa13.25□□□□□ -0.29
SHB-201ENST00000377707 UBE2BP63146 152 aa13.24□□□□□ -0.29
SHB-201ENST00000377707 LOC110117498A0A087WWA1 95 aa13.24□□□□□ -0.29
SHB-201ENST00000377707 hDV103S1A0JD37 113 aa13.23□□□□□ -0.29
SHB-201ENST00000377707 ELOF1P60002 83 aaKnown RBP13.23□□□□□ -0.29
SHB-201ENST00000377707 NDUFS5O43920 106 aa13.23□□□□□ -0.29
SHB-201ENST00000377707 DEFB105AQ8NG35 78 aa13.23□□□□□ -0.29
SHB-201ENST00000377707 C8orf87E5RJ46 101 aa13.21□□□□□ -0.29
SHB-201ENST00000377707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.21□□□□□ -0.29
SHB-201ENST00000377707 DNHD1Q96M86 4753 aa13.21□□□□□ -0.3
SHB-201ENST00000377707 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
SHB-201ENST00000377707 Q8N9L7 120 aa13.2□□□□□ -0.3
SHB-201ENST00000377707 TRAV22A0A0B4J277 110 aa13.19□□□□□ -0.3
SHB-201ENST00000377707 SERTAD4-AS1Q5TG53 156 aa13.19□□□□□ -0.3
SHB-201ENST00000377707 DEFB131BA0A096LNP1 70 aa13.18□□□□□ -0.3
SHB-201ENST00000377707 CASC10Q5T4H9 136 aa13.18□□□□□ -0.3
SHB-201ENST00000377707 DNAH10Q8IVF4 4471 aa13.18□□□□□ -0.3
SHB-201ENST00000377707 RPL37AP8A6NKH3 93 aa13.17□□□□□ -0.3
SHB-201ENST00000377707 SYCNQ0VAF6 134 aa13.17□□□□□ -0.3
SHB-201ENST00000377707 CXCL6P80162 114 aa13.16□□□□□ -0.3
SHB-201ENST00000377707 FAM168BA1KXE4 195 aa13.16□□□□□ -0.3
SHB-201ENST00000377707 A8MU10 97 aa13.15□□□□□ -0.3
SHB-201ENST00000377707 LINC00528Q8N1L1 170 aa13.15□□□□□ -0.3
SHB-201ENST00000377707 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
SHB-201ENST00000377707 PHF5AQ7RTV0 110 aaKnown RBP13.12□□□□□ -0.31
SHB-201ENST00000377707 BPY2O14599 106 aa13.11□□□□□ -0.31
SHB-201ENST00000377707 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
SHB-201ENST00000377707 K7EIL1 84 aa13.11□□□□□ -0.31
SHB-201ENST00000377707 SRRM2Q9UQ35 2752 aaKnown RBP13.1□□□□□ -0.31
SHB-201ENST00000377707 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
SHB-201ENST00000377707 NKAPP1Q8N9T2 125 aa13.09□□□□□ -0.31
SHB-201ENST00000377707 C1orf64Q8NEQ6 169 aa13.09□□□□□ -0.31
SHB-201ENST00000377707 A8MUN3 132 aa13.08□□□□□ -0.32
SHB-201ENST00000377707 H3BNG1 76 aa13.07□□□□□ -0.32
SHB-201ENST00000377707 LINC01556Q5JQF7 62 aa13.07□□□□□ -0.32
SHB-201ENST00000377707 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
SHB-201ENST00000377707 SPTSSBQ8NFR3 76 aa13.06□□□□□ -0.32
SHB-201ENST00000377707 UBE2AP49459 152 aa13.05□□□□□ -0.32
SHB-201ENST00000377707 PDE6GP18545 87 aa13.05□□□□□ -0.32
SHB-201ENST00000377707 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
SHB-201ENST00000377707 HUWE1Q7Z6Z7 4374 aaKnown RBP13.04□□□□□ -0.32
SHB-201ENST00000377707 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 Q8N377 158 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 ST20-AS1Q8NBB2 130 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 ATP11AUNQ6ZP68 121 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 HIGD2AQ9BW72 106 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
SHB-201ENST00000377707 A6NN06 94 aa13□□□□□ -0.33
SHB-201ENST00000377707 Q5VV11 94 aa13□□□□□ -0.33
SHB-201ENST00000377707 KRTAP7-1Q8IUC3 87 aa13□□□□□ -0.33
SHB-201ENST00000377707 Q9BRP9 147 aa13□□□□□ -0.33
SHB-201ENST00000377707 LCA10Q71F78 164 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms