RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
TNFRSF9-201ENST00000377507 HAMPP81172 84 aa7.64□□□□□ -1.19
TNFRSF9-201ENST00000377507 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
TNFRSF9-201ENST00000377507 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
TNFRSF9-201ENST00000377507 MRAPQ8TCY5 172 aa7.62□□□□□ -1.19
TNFRSF9-201ENST00000377507 TM2D3Q9BRN9 247 aa7.62□□□□□ -1.19
TNFRSF9-201ENST00000377507 F8P00451 2351 aa7.62□□□□□ -1.19
TNFRSF9-201ENST00000377507 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF9-201ENST00000377507 TMEM258P61165 79 aa7.62□□□□□ -1.19
TNFRSF9-201ENST00000377507 SPRR1AP35321 89 aa7.61□□□□□ -1.19
TNFRSF9-201ENST00000377507 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
TNFRSF9-201ENST00000377507 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 SVIPQ8NHG7 77 aa7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 Q8N377 158 aa7.6□□□□□ -1.19
TNFRSF9-201ENST00000377507 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.19
TNFRSF9-201ENST00000377507 Q6ZRX8 168 aa7.59□□□□□ -1.19
TNFRSF9-201ENST00000377507 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
TNFRSF9-201ENST00000377507 RMI2Q96E14 147 aa7.59□□□□□ -1.19
TNFRSF9-201ENST00000377507 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
TNFRSF9-201ENST00000377507 PRYO14603 147 aa7.58□□□□□ -1.2
TNFRSF9-201ENST00000377507 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
TNFRSF9-201ENST00000377507 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
TNFRSF9-201ENST00000377507 FAM168BA1KXE4 195 aa7.57□□□□□ -1.2
TNFRSF9-201ENST00000377507 J3KT08 172 aa7.56□□□□□ -1.2
TNFRSF9-201ENST00000377507 Q9BRP9 147 aa7.56□□□□□ -1.2
TNFRSF9-201ENST00000377507 A0A1B0GW54 56 aa7.56□□□□□ -1.2
TNFRSF9-201ENST00000377507 K7EIL1 84 aa7.55□□□□□ -1.2
TNFRSF9-201ENST00000377507 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
TNFRSF9-201ENST00000377507 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
TNFRSF9-201ENST00000377507 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
TNFRSF9-201ENST00000377507 TNP2Q05952 138 aa7.54□□□□□ -1.2
TNFRSF9-201ENST00000377507 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
TNFRSF9-201ENST00000377507 DEFB105AQ8NG35 78 aa7.54□□□□□ -1.2
TNFRSF9-201ENST00000377507 PRB2P02812 416 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF9-201ENST00000377507 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
TNFRSF9-201ENST00000377507 MRPL55Q7Z7F7 128 aaKnown RBP7.53□□□□□ -1.2
TNFRSF9-201ENST00000377507 ETDCA0A1B0GVM5 59 aa7.52□□□□□ -1.2
TNFRSF9-201ENST00000377507 KLKP1Q107X0 134 aa7.52□□□□□ -1.2
TNFRSF9-201ENST00000377507 NREPQ16612 68 aa7.52□□□□□ -1.21
TNFRSF9-201ENST00000377507 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
TNFRSF9-201ENST00000377507 IGKV4-1P06312 121 aa7.5□□□□□ -1.21
TNFRSF9-201ENST00000377507 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
TNFRSF9-201ENST00000377507 H7BZZ5 65 aa7.49□□□□□ -1.21
TNFRSF9-201ENST00000377507 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
TNFRSF9-201ENST00000377507 ST20-AS1Q8NBB2 130 aa7.49□□□□□ -1.21
TNFRSF9-201ENST00000377507 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 BPY2O14599 106 aa7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
TNFRSF9-201ENST00000377507 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
TNFRSF9-201ENST00000377507 REG3GQ6UW15 175 aa7.47□□□□□ -1.21
TNFRSF9-201ENST00000377507 Q8NBF4 154 aa7.47□□□□□ -1.21
TNFRSF9-201ENST00000377507 Q8N9L7 120 aa7.46□□□□□ -1.21
TNFRSF9-201ENST00000377507 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.21
TNFRSF9-201ENST00000377507 C16orf90A8MZG2 172 aa7.46□□□□□ -1.22
TNFRSF9-201ENST00000377507 OXTP01178 125 aa7.46□□□□□ -1.22
TNFRSF9-201ENST00000377507 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
TNFRSF9-201ENST00000377507 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
TNFRSF9-201ENST00000377507 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
TNFRSF9-201ENST00000377507 FAM236DA0A1B0GTK5 79 aa7.44□□□□□ -1.22
TNFRSF9-201ENST00000377507 FAM236CP0DP71 79 aa7.44□□□□□ -1.22
TNFRSF9-201ENST00000377507 UBE2BP63146 152 aa7.44□□□□□ -1.22
TNFRSF9-201ENST00000377507 A0A096LNI7 61 aa7.43□□□□□ -1.22
TNFRSF9-201ENST00000377507 EPM2AB3EWF7 344 aa7.43□□□□□ -1.22
TNFRSF9-201ENST00000377507 NDUFC1O43677 76 aa7.43□□□□□ -1.22
TNFRSF9-201ENST00000377507 SNURFQ9Y675 71 aa7.42□□□□□ -1.22
TNFRSF9-201ENST00000377507 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
TNFRSF9-201ENST00000377507 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
TNFRSF9-201ENST00000377507 NBEAL1Q6ZS30 2694 aa7.4□□□□□ -1.22
TNFRSF9-201ENST00000377507 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.23
TNFRSF9-201ENST00000377507 TMEM254Q8TBM7 123 aa7.4□□□□□ -1.23
TNFRSF9-201ENST00000377507 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
TNFRSF9-201ENST00000377507 F8WEM9 126 aa7.39□□□□□ -1.23
TNFRSF9-201ENST00000377507 DSCR10P59022 87 aa7.39□□□□□ -1.23
TNFRSF9-201ENST00000377507 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
TNFRSF9-201ENST00000377507 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
TNFRSF9-201ENST00000377507 PSCAO43653 123 aa7.38□□□□□ -1.23
TNFRSF9-201ENST00000377507 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
TNFRSF9-201ENST00000377507 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
TNFRSF9-201ENST00000377507 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
TNFRSF9-201ENST00000377507 H0Y9J4 135 aa7.37□□□□□ -1.23
TNFRSF9-201ENST00000377507 PRLHP81277 87 aa7.37□□□□□ -1.23
TNFRSF9-201ENST00000377507 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
TNFRSF9-201ENST00000377507 LCE6AA0A183 80 aa7.36□□□□□ -1.23
TNFRSF9-201ENST00000377507 Q5XG85 94 aa7.35□□□□□ -1.23
TNFRSF9-201ENST00000377507 UBE2DNLQ8IWF7 75 aa7.35□□□□□ -1.23
TNFRSF9-201ENST00000377507 DNAH10Q8IVF4 4471 aa7.35□□□□□ -1.23
TNFRSF9-201ENST00000377507 ATP5EP56381 51 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF9-201ENST00000377507 DNAH9Q9NYC9 4486 aa7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 DYNC2H1Q8NCM8 4307 aaKnown RBP7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 LRCOL1A6NCL2 159 aa7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 SPRR1BP22528 89 aa7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
TNFRSF9-201ENST00000377507 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms