RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 REG3GQ6UW15 175 aa8.06□□□□□ -1.12
CBWD3-203ENST00000377344 PRYO14603 147 aa8.06□□□□□ -1.12
CBWD3-203ENST00000377344 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-203ENST00000377344 PSMB2P49721 201 aa8.06□□□□□ -1.12
CBWD3-203ENST00000377344 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-203ENST00000377344 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
CBWD3-203ENST00000377344 NAA38Q9BRA0 125 aaKnown RBP8.05□□□□□ -1.12
CBWD3-203ENST00000377344 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
CBWD3-203ENST00000377344 RPL28P46779 137 aaKnown RBP8.03□□□□□ -1.12
CBWD3-203ENST00000377344 PSORS1C2Q9UIG4 136 aa8.03□□□□□ -1.12
CBWD3-203ENST00000377344 APOBP04114 4563 aaKnown RBP8.03□□□□□ -1.12
CBWD3-203ENST00000377344 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
CBWD3-203ENST00000377344 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
CBWD3-203ENST00000377344 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
CBWD3-203ENST00000377344 TRIAP1O43715 76 aa8.02□□□□□ -1.13
CBWD3-203ENST00000377344 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
CBWD3-203ENST00000377344 FAM19A1Q7Z5A9 133 aa8.02□□□□□ -1.13
CBWD3-203ENST00000377344 H3BUT2 72 aa8.01□□□□□ -1.13
CBWD3-203ENST00000377344 VAMP3Q15836 100 aa8.01□□□□□ -1.13
CBWD3-203ENST00000377344 SPRR1AP35321 89 aa8.01□□□□□ -1.13
CBWD3-203ENST00000377344 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
CBWD3-203ENST00000377344 C9orf118A6NHY6 69 aa8□□□□□ -1.13
CBWD3-203ENST00000377344 BCE1O60756 84 aa8□□□□□ -1.13
CBWD3-203ENST00000377344 COX6CP09669 75 aa8□□□□□ -1.13
CBWD3-203ENST00000377344 SCGB1C2P0DMR2 95 aa8□□□□□ -1.13
CBWD3-203ENST00000377344 COX7BP24311 80 aa7.99□□□□□ -1.13
CBWD3-203ENST00000377344 UBE2AP49459 152 aa7.99□□□□□ -1.13
CBWD3-203ENST00000377344 PRLHP81277 87 aa7.99□□□□□ -1.13
CBWD3-203ENST00000377344 B5MCH6 92 aa7.98□□□□□ -1.13
CBWD3-203ENST00000377344 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
CBWD3-203ENST00000377344 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
CBWD3-203ENST00000377344 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
CBWD3-203ENST00000377344 Q6ZRX8 168 aa7.97□□□□□ -1.13
CBWD3-203ENST00000377344 TRBV7-6A0A0J9YX20 115 aa7.96□□□□□ -1.13
CBWD3-203ENST00000377344 H0YGX0 51 aa7.96□□□□□ -1.13
CBWD3-203ENST00000377344 RYR1P21817 5038 aa7.96□□□□□ -1.14
CBWD3-203ENST00000377344 CLEC2BQ92478 149 aa7.96□□□□□ -1.14
CBWD3-203ENST00000377344 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.14
CBWD3-203ENST00000377344 A0A1W2PPM0 123 aa7.95□□□□□ -1.14
CBWD3-203ENST00000377344 HIGD2AQ9BW72 106 aa7.95□□□□□ -1.14
CBWD3-203ENST00000377344 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
CBWD3-203ENST00000377344 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
CBWD3-203ENST00000377344 FABP2P12104 132 aa7.94□□□□□ -1.14
CBWD3-203ENST00000377344 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
CBWD3-203ENST00000377344 SLC25A20O43772 301 aa7.94□□□□□ -1.14
CBWD3-203ENST00000377344 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
CBWD3-203ENST00000377344 FAM218AQ96MZ4 157 aa7.93□□□□□ -1.14
CBWD3-203ENST00000377344 Q9BRP9 147 aa7.93□□□□□ -1.14
CBWD3-203ENST00000377344 H0Y9J4 135 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 ZNF861PO60384 105 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 SNCGO76070 127 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
CBWD3-203ENST00000377344 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
CBWD3-203ENST00000377344 HSPG2P98160 4391 aa7.91□□□□□ -1.14
CBWD3-203ENST00000377344 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.14
CBWD3-203ENST00000377344 TCL1BO95988 128 aa7.9□□□□□ -1.14
CBWD3-203ENST00000377344 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
CBWD3-203ENST00000377344 Q5VSD8 79 aa7.9□□□□□ -1.14
CBWD3-203ENST00000377344 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 ATXN8Q156A1 80 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 FAT1Q14517 4588 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 LST1O00453 97 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
CBWD3-203ENST00000377344 DNAL4O96015 105 aa7.88□□□□□ -1.15
CBWD3-203ENST00000377344 A0A1B0GX51 115 aa7.87□□□□□ -1.15
CBWD3-203ENST00000377344 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
CBWD3-203ENST00000377344 Q6ZQY7 126 aa7.87□□□□□ -1.15
CBWD3-203ENST00000377344 Q8N1X5 172 aa7.87□□□□□ -1.15
CBWD3-203ENST00000377344 ST20-AS1Q8NBB2 130 aa7.86□□□□□ -1.15
CBWD3-203ENST00000377344 H3BMG7 143 aa7.85□□□□□ -1.15
CBWD3-203ENST00000377344 TRACP01848 142 aa7.85□□□□□ -1.15
CBWD3-203ENST00000377344 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
CBWD3-203ENST00000377344 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
CBWD3-203ENST00000377344 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
CBWD3-203ENST00000377344 A0A1B0GV90 55 aa7.84□□□□□ -1.15
CBWD3-203ENST00000377344 K7EP34 96 aa7.84□□□□□ -1.15
CBWD3-203ENST00000377344 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
CBWD3-203ENST00000377344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.84□□□□□ -1.15
CBWD3-203ENST00000377344 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
CBWD3-203ENST00000377344 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
CBWD3-203ENST00000377344 GAGE2AQ6NT46 116 aa7.82□□□□□ -1.16
CBWD3-203ENST00000377344 ORMDL1Q9P0S3 153 aa7.82□□□□□ -1.16
CBWD3-203ENST00000377344 C9JAW5 83 aa7.81□□□□□ -1.16
CBWD3-203ENST00000377344 MTURNQ8N3F0 131 aa7.8□□□□□ -1.16
CBWD3-203ENST00000377344 SPRR4Q96PI1 79 aa7.8□□□□□ -1.16
CBWD3-203ENST00000377344 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
CBWD3-203ENST00000377344 TEX49A0A1B0GTD5 131 aa7.79□□□□□ -1.16
CBWD3-203ENST00000377344 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
CBWD3-203ENST00000377344 GHRHP01286 108 aa7.78□□□□□ -1.16
CBWD3-203ENST00000377344 LINC01547P58512 204 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-203ENST00000377344 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
CBWD3-203ENST00000377344 BAALC-AS2P0C853 105 aa7.78□□□□□ -1.16
CBWD3-203ENST00000377344 Q8N377 158 aa7.78□□□□□ -1.16
CBWD3-203ENST00000377344 TMEM256-PLSCR3K7ERE1 68 aa7.76□□□□□ -1.17
CBWD3-203ENST00000377344 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms