RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
MDC1-201ENST00000376406 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
MDC1-201ENST00000376406 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
MDC1-201ENST00000376406 ACYP2P14621 99 aa7.29□□□□□ -1.24
MDC1-201ENST00000376406 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 A0A087WTM6 91 aa7.28□□□□□ -1.24
MDC1-201ENST00000376406 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.24
MDC1-201ENST00000376406 KRTAP1-1Q07627 177 aa7.27□□□□□ -1.25
MDC1-201ENST00000376406 AKAP13Q12802 2813 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 SPINK1P00995 79 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 KRTAP10-3P60369 221 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 ZNF861PO60384 105 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 PCNTO95613 3336 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 IGKV2D-30A0A075B6S6 120 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 A8MWP4 228 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 IGKV2-30P06310 120 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
MDC1-201ENST00000376406 WIPF1O43516 503 aa7.25□□□□□ -1.25
MDC1-201ENST00000376406 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
MDC1-201ENST00000376406 BAHCC1Q9P281 2608 aa7.24□□□□□ -1.25
MDC1-201ENST00000376406 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
MDC1-201ENST00000376406 TEX15Q9BXT5 2789 aa7.23□□□□□ -1.25
MDC1-201ENST00000376406 A0A1B0GU69 56 aa7.23□□□□□ -1.25
MDC1-201ENST00000376406 K7EQZ3 153 aa7.22□□□□□ -1.25
MDC1-201ENST00000376406 CNBPP62633 177 aaKnown RBP7.22□□□□□ -1.25
MDC1-201ENST00000376406 C9orf129Q5T035 196 aaKnown RBP7.22□□□□□ -1.25
MDC1-201ENST00000376406 APLNQ9ULZ1 77 aa7.22□□□□□ -1.25
MDC1-201ENST00000376406 ZNF575Q86XF7 245 aa7.21□□□□□ -1.25
MDC1-201ENST00000376406 IGFL1Q6UW32 110 aa7.19□□□□□ -1.26
MDC1-201ENST00000376406 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
MDC1-201ENST00000376406 Q8N377 158 aa7.18□□□□□ -1.26
MDC1-201ENST00000376406 Q96NJ1 140 aa7.17□□□□□ -1.26
MDC1-201ENST00000376406 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
MDC1-201ENST00000376406 KLKP1Q107X0 134 aa7.16□□□□□ -1.26
MDC1-201ENST00000376406 MRPL34Q9BQ48 92 aaKnown RBP7.16□□□□□ -1.26
MDC1-201ENST00000376406 FLG2Q5D862 2391 aaPredicted RBP7.16□□□□□ -1.26
MDC1-201ENST00000376406 ITPR2Q14571 2701 aa7.15□□□□□ -1.26
MDC1-201ENST00000376406 CHD9Q3L8U1 2897 aa7.15□□□□□ -1.27
MDC1-201ENST00000376406 IGLV7-43P04211 117 aa7.14□□□□□ -1.27
MDC1-201ENST00000376406 LINC01600Q96MT4 127 aa7.14□□□□□ -1.27
MDC1-201ENST00000376406 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
MDC1-201ENST00000376406 OBSCN-AS1Q96MR7 158 aa7.13□□□□□ -1.27
MDC1-201ENST00000376406 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
MDC1-201ENST00000376406 HTTP42858 3142 aa7.11□□□□□ -1.27
MDC1-201ENST00000376406 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
MDC1-201ENST00000376406 COA5Q86WW8 74 aa7.11□□□□□ -1.27
MDC1-201ENST00000376406 TEP1Q99973 2627 aaKnown RBP7.1□□□□□ -1.27
MDC1-201ENST00000376406 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
MDC1-201ENST00000376406 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
MDC1-201ENST00000376406 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
MDC1-201ENST00000376406 CHD6Q8TD26 2715 aa7.09□□□□□ -1.27
MDC1-201ENST00000376406 PSORS1C2Q9UIG4 136 aa7.09□□□□□ -1.27
MDC1-201ENST00000376406 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
MDC1-201ENST00000376406 A0A1B0GVX0 72 aa7.09□□□□□ -1.28
MDC1-201ENST00000376406 UNC79Q9P2D8 2635 aa7.08□□□□□ -1.28
MDC1-201ENST00000376406 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
MDC1-201ENST00000376406 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
MDC1-201ENST00000376406 H7BZZ5 65 aa7.07□□□□□ -1.28
MDC1-201ENST00000376406 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
MDC1-201ENST00000376406 SETXQ7Z333 2677 aaKnown RBP7.06□□□□□ -1.28
MDC1-201ENST00000376406 CD164Q04900 197 aa7.06□□□□□ -1.28
MDC1-201ENST00000376406 A0A1W2PNN7 141 aa7.05□□□□□ -1.28
MDC1-201ENST00000376406 COL6A5A8TX70 2615 aa7.05□□□□□ -1.28
MDC1-201ENST00000376406 DSCR10P59022 87 aa7.04□□□□□ -1.28
MDC1-201ENST00000376406 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
MDC1-201ENST00000376406 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
MDC1-201ENST00000376406 MKI67P46013 3256 aaKnown RBP7.03□□□□□ -1.28
MDC1-201ENST00000376406 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
MDC1-201ENST00000376406 LAMA2P24043 3122 aaKnown RBP7.02□□□□□ -1.29
MDC1-201ENST00000376406 IGSF10Q6WRI0 2623 aa7.02□□□□□ -1.29
MDC1-201ENST00000376406 A0A1W2PNM2 257 aa7.02□□□□□ -1.29
MDC1-201ENST00000376406 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
MDC1-201ENST00000376406 A0A0G2JQZ4 141 aa7.01□□□□□ -1.29
MDC1-201ENST00000376406 A8MUN3 132 aa7□□□□□ -1.29
MDC1-201ENST00000376406 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
MDC1-201ENST00000376406 CFAP54Q96N23 3096 aa6.99□□□□□ -1.29
MDC1-201ENST00000376406 NBEAL1Q6ZS30 2694 aa6.98□□□□□ -1.29
MDC1-201ENST00000376406 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
MDC1-201ENST00000376406 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
MDC1-201ENST00000376406 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
MDC1-201ENST00000376406 LAMA3Q16787 3333 aa6.97□□□□□ -1.29
MDC1-201ENST00000376406 DSPP15924 2871 aaKnown RBP6.97□□□□□ -1.29
MDC1-201ENST00000376406 TNP2Q05952 138 aa6.96□□□□□ -1.29
MDC1-201ENST00000376406 UQCR11O14957 56 aa6.96□□□□□ -1.3
MDC1-201ENST00000376406 A0A0C4DFX4 3053 aa6.96□□□□□ -1.3
MDC1-201ENST00000376406 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
MDC1-201ENST00000376406 ANAPC11Q9NYG5 84 aa6.93□□□□□ -1.3
MDC1-201ENST00000376406 OCR1Q9BZK8 76 aa6.93□□□□□ -1.3
MDC1-201ENST00000376406 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
MDC1-201ENST00000376406 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
MDC1-201ENST00000376406 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
MDC1-201ENST00000376406 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms