RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 LINC01600Q96MT4 127 aa10□□□□□ -0.81
UBQLN1-202ENST00000376395 C22orf24Q9Y442 160 aa10□□□□□ -0.81
UBQLN1-202ENST00000376395 TMEM254Q8TBM7 123 aa9.99□□□□□ -0.81
UBQLN1-202ENST00000376395 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
UBQLN1-202ENST00000376395 SERP1Q9Y6X1 66 aa9.98□□□□□ -0.81
UBQLN1-202ENST00000376395 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
UBQLN1-202ENST00000376395 ESRGQ1W209 222 aa9.97□□□□□ -0.81
UBQLN1-202ENST00000376395 Q8NAQ8 132 aa9.96□□□□□ -0.81
UBQLN1-202ENST00000376395 TM2D3Q9BRN9 247 aa9.96□□□□□ -0.81
UBQLN1-202ENST00000376395 NDUFB1O75438 58 aa9.96□□□□□ -0.82
UBQLN1-202ENST00000376395 Q8NDZ9 215 aa9.96□□□□□ -0.82
UBQLN1-202ENST00000376395 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
UBQLN1-202ENST00000376395 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
UBQLN1-202ENST00000376395 CXCL6P80162 114 aa9.94□□□□□ -0.82
UBQLN1-202ENST00000376395 ZFHX3Q15911 3703 aa9.94□□□□□ -0.82
UBQLN1-202ENST00000376395 C7orf33Q8WU49 177 aa9.94□□□□□ -0.82
UBQLN1-202ENST00000376395 PRYO14603 147 aa9.93□□□□□ -0.82
UBQLN1-202ENST00000376395 ELOF1P60002 83 aaKnown RBP9.92□□□□□ -0.82
UBQLN1-202ENST00000376395 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
UBQLN1-202ENST00000376395 LOC110117498A0A087WWA1 95 aa9.9□□□□□ -0.82
UBQLN1-202ENST00000376395 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.82
UBQLN1-202ENST00000376395 KRTAP1-1Q07627 177 aa9.9□□□□□ -0.83
UBQLN1-202ENST00000376395 A0A087WSZ3 146 aa9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 TRBV7-6A0A0J9YX20 115 aa9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 PRLHP81277 87 aa9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 Q6ZRP5 223 aa9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 ATP5EP56381 51 aaPredicted RBP9.89□□□□□ -0.83
UBQLN1-202ENST00000376395 VPREB1P12018 145 aa9.88□□□□□ -0.83
UBQLN1-202ENST00000376395 SMIM29Q86T20 159 aa9.88□□□□□ -0.83
UBQLN1-202ENST00000376395 B9D2Q9BPU9 175 aa9.88□□□□□ -0.83
UBQLN1-202ENST00000376395 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
UBQLN1-202ENST00000376395 LINC00208Q96KT6 92 aa9.87□□□□□ -0.83
UBQLN1-202ENST00000376395 LINC00612Q8N6U2 182 aa9.86□□□□□ -0.83
UBQLN1-202ENST00000376395 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
UBQLN1-202ENST00000376395 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
UBQLN1-202ENST00000376395 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
UBQLN1-202ENST00000376395 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
UBQLN1-202ENST00000376395 FAM168BA1KXE4 195 aa9.85□□□□□ -0.83
UBQLN1-202ENST00000376395 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
UBQLN1-202ENST00000376395 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
UBQLN1-202ENST00000376395 IGKV4-1P06312 121 aa9.83□□□□□ -0.84
UBQLN1-202ENST00000376395 SPTSSBQ8NFR3 76 aa9.83□□□□□ -0.84
UBQLN1-202ENST00000376395 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
UBQLN1-202ENST00000376395 IGLV9-49A0A0B4J1Y8 123 aa9.82□□□□□ -0.84
UBQLN1-202ENST00000376395 SERTAD4-AS1Q5TG53 156 aa9.82□□□□□ -0.84
UBQLN1-202ENST00000376395 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
UBQLN1-202ENST00000376395 PSPHP1O15172 72 aa9.81□□□□□ -0.84
UBQLN1-202ENST00000376395 GVQW2A0A096LPI5 108 aaPredicted RBP9.81□□□□□ -0.84
UBQLN1-202ENST00000376395 VWFP04275 2813 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 LINC00528Q8N1L1 170 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 Q9BRP9 147 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
UBQLN1-202ENST00000376395 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
UBQLN1-202ENST00000376395 Q6ZRX8 168 aa9.77□□□□□ -0.85
UBQLN1-202ENST00000376395 H7BZZ5 65 aa9.77□□□□□ -0.85
UBQLN1-202ENST00000376395 BCE1O60756 84 aa9.76□□□□□ -0.85
UBQLN1-202ENST00000376395 TRBV7-4A0A0J9YYF1 115 aa9.75□□□□□ -0.85
UBQLN1-202ENST00000376395 HCG22E2RYF7 251 aa9.75□□□□□ -0.85
UBQLN1-202ENST00000376395 Q8NBF4 154 aa9.74□□□□□ -0.85
UBQLN1-202ENST00000376395 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
UBQLN1-202ENST00000376395 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
UBQLN1-202ENST00000376395 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
UBQLN1-202ENST00000376395 C1orf195Q5TG92 126 aa9.71□□□□□ -0.85
UBQLN1-202ENST00000376395 Q8N377 158 aa9.71□□□□□ -0.85
UBQLN1-202ENST00000376395 PCOTHQ58A44 107 aa9.71□□□□□ -0.85
UBQLN1-202ENST00000376395 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.85
UBQLN1-202ENST00000376395 H3BNG1 76 aa9.71□□□□□ -0.86
UBQLN1-202ENST00000376395 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
UBQLN1-202ENST00000376395 KLKP1Q107X0 134 aa9.71□□□□□ -0.86
UBQLN1-202ENST00000376395 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
UBQLN1-202ENST00000376395 F8WDY8 70 aa9.7□□□□□ -0.86
UBQLN1-202ENST00000376395 CHKB-CPT1BH3BT56 60 aa9.7□□□□□ -0.86
UBQLN1-202ENST00000376395 PDZD2O15018 2839 aa9.7□□□□□ -0.86
UBQLN1-202ENST00000376395 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
UBQLN1-202ENST00000376395 NBPF19A0A087WUL8 3843 aa9.69□□□□□ -0.86
UBQLN1-202ENST00000376395 K7EQZ3 153 aa9.69□□□□□ -0.86
UBQLN1-202ENST00000376395 PRO0628Q9UI54 55 aa9.69□□□□□ -0.86
UBQLN1-202ENST00000376395 H0Y9P7 68 aa9.68□□□□□ -0.86
UBQLN1-202ENST00000376395 OXTP01178 125 aa9.68□□□□□ -0.86
UBQLN1-202ENST00000376395 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
UBQLN1-202ENST00000376395 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
UBQLN1-202ENST00000376395 A6NED7 52 aa9.67□□□□□ -0.86
UBQLN1-202ENST00000376395 ERC2-IT1O76042 136 aa9.67□□□□□ -0.86
UBQLN1-202ENST00000376395 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
UBQLN1-202ENST00000376395 KRTAP24-1Q3LI83 254 aa9.66□□□□□ -0.86
UBQLN1-202ENST00000376395 V9GYY9 64 aa9.65□□□□□ -0.86
UBQLN1-202ENST00000376395 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.87
UBQLN1-202ENST00000376395 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
UBQLN1-202ENST00000376395 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
UBQLN1-202ENST00000376395 IGLV1-50A0A075B6I6 118 aa9.63□□□□□ -0.87
UBQLN1-202ENST00000376395 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
UBQLN1-202ENST00000376395 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
UBQLN1-202ENST00000376395 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
UBQLN1-202ENST00000376395 FBN1P35555 2871 aaKnown RBP9.59□□□□□ -0.87
UBQLN1-202ENST00000376395 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
UBQLN1-202ENST00000376395 PMAIP1Q13794 54 aa9.58□□□□□ -0.88
UBQLN1-202ENST00000376395 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms