RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TEX15Q9BXT5 2789 aa9.07□□□□□ -0.96
C9orf47-203ENST00000375851 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
C9orf47-203ENST00000375851 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
C9orf47-203ENST00000375851 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
C9orf47-203ENST00000375851 STAB1Q9NY15 2570 aa9.05□□□□□ -0.96
C9orf47-203ENST00000375851 VPS13AQ96RL7 3174 aa9.04□□□□□ -0.96
C9orf47-203ENST00000375851 BCE1O60756 84 aa9.04□□□□□ -0.96
C9orf47-203ENST00000375851 ZNF575Q86XF7 245 aa9.04□□□□□ -0.96
C9orf47-203ENST00000375851 CRYGAP11844 174 aa9.04□□□□□ -0.96
C9orf47-203ENST00000375851 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
C9orf47-203ENST00000375851 KCNQ1DNQ9H478 68 aa9.03□□□□□ -0.96
C9orf47-203ENST00000375851 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.96
C9orf47-203ENST00000375851 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
C9orf47-203ENST00000375851 WWC2-AS2Q96NR7 200 aa9.01□□□□□ -0.97
C9orf47-203ENST00000375851 SPINK1P00995 79 aa9.01□□□□□ -0.97
C9orf47-203ENST00000375851 PSPHP1O15172 72 aa9□□□□□ -0.97
C9orf47-203ENST00000375851 COL6A5A8TX70 2615 aa9□□□□□ -0.97
C9orf47-203ENST00000375851 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
C9orf47-203ENST00000375851 IGKV2-30P06310 120 aa9□□□□□ -0.97
C9orf47-203ENST00000375851 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
C9orf47-203ENST00000375851 TRBV7-4A0A0J9YYF1 115 aa8.98□□□□□ -0.97
C9orf47-203ENST00000375851 TM2D3Q9BRN9 247 aa8.97□□□□□ -0.97
C9orf47-203ENST00000375851 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.97
C9orf47-203ENST00000375851 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.97
C9orf47-203ENST00000375851 NOTCH1P46531 2555 aa8.95□□□□□ -0.98
C9orf47-203ENST00000375851 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
C9orf47-203ENST00000375851 IGSF10Q6WRI0 2623 aa8.93□□□□□ -0.98
C9orf47-203ENST00000375851 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
C9orf47-203ENST00000375851 CDH23Q9H251 3354 aa8.93□□□□□ -0.98
C9orf47-203ENST00000375851 TRAV22A0A0B4J277 110 aa8.92□□□□□ -0.98
C9orf47-203ENST00000375851 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
C9orf47-203ENST00000375851 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
C9orf47-203ENST00000375851 Q8N377 158 aa8.91□□□□□ -0.98
C9orf47-203ENST00000375851 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
C9orf47-203ENST00000375851 CASC10Q5T4H9 136 aa8.9□□□□□ -0.99
C9orf47-203ENST00000375851 C1orf195Q5TG92 126 aa8.9□□□□□ -0.99
C9orf47-203ENST00000375851 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.99
C9orf47-203ENST00000375851 K7EQZ3 153 aa8.89□□□□□ -0.99
C9orf47-203ENST00000375851 LINC00313P59037 77 aa8.89□□□□□ -0.99
C9orf47-203ENST00000375851 H3BPC8 53 aa8.88□□□□□ -0.99
C9orf47-203ENST00000375851 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
C9orf47-203ENST00000375851 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
C9orf47-203ENST00000375851 A0A087WTM6 91 aa8.88□□□□□ -0.99
C9orf47-203ENST00000375851 FRYQ5TBA9 3013 aa8.88□□□□□ -0.99
C9orf47-203ENST00000375851 UBR5O95071 2799 aaPredicted RBP8.87□□□□□ -0.99
C9orf47-203ENST00000375851 A8MWP4 228 aa8.87□□□□□ -0.99
C9orf47-203ENST00000375851 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
C9orf47-203ENST00000375851 NBEAL1Q6ZS30 2694 aa8.87□□□□□ -0.99
C9orf47-203ENST00000375851 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
C9orf47-203ENST00000375851 CR1P17927 2039 aa8.85□□□□□ -0.99
C9orf47-203ENST00000375851 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
C9orf47-203ENST00000375851 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
C9orf47-203ENST00000375851 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
C9orf47-203ENST00000375851 A0A0G2JQZ4 141 aa8.84□□□□□ -0.99
C9orf47-203ENST00000375851 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
C9orf47-203ENST00000375851 ZNF861PO60384 105 aa8.84□□□□□ -0.99
C9orf47-203ENST00000375851 ACYP2P14621 99 aa8.83□□□□□ -1
C9orf47-203ENST00000375851 FAM104AQ969W3 186 aa8.83□□□□□ -1
C9orf47-203ENST00000375851 ERC2-IT1O76042 136 aa8.81□□□□□ -1
C9orf47-203ENST00000375851 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
C9orf47-203ENST00000375851 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
C9orf47-203ENST00000375851 PRR15Q8IV56 129 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 Q96NJ1 140 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 FLNCQ14315 2725 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 C8orf87E5RJ46 101 aa8.78□□□□□ -1
C9orf47-203ENST00000375851 WIPF1O43516 503 aa8.77□□□□□ -1.01
C9orf47-203ENST00000375851 A0A1B0GU69 56 aa8.77□□□□□ -1.01
C9orf47-203ENST00000375851 NBEAL2Q6ZNJ1 2754 aa8.77□□□□□ -1.01
C9orf47-203ENST00000375851 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
C9orf47-203ENST00000375851 CELSR3Q9NYQ7 3312 aa8.76□□□□□ -1.01
C9orf47-203ENST00000375851 LOC101927531A0A1B0GV80 90 aa8.76□□□□□ -1.01
C9orf47-203ENST00000375851 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
C9orf47-203ENST00000375851 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
C9orf47-203ENST00000375851 C4orf26Q17RF5 130 aa8.75□□□□□ -1.01
C9orf47-203ENST00000375851 LAMA1P25391 3075 aa8.75□□□□□ -1.01
C9orf47-203ENST00000375851 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
C9orf47-203ENST00000375851 SZT2Q5T011 3432 aa8.74□□□□□ -1.01
C9orf47-203ENST00000375851 IGLV5-37A0A075B6J1 123 aa8.71□□□□□ -1.01
C9orf47-203ENST00000375851 IGLV7-43P04211 117 aa8.71□□□□□ -1.01
C9orf47-203ENST00000375851 KLKP1Q107X0 134 aa8.71□□□□□ -1.01
C9orf47-203ENST00000375851 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
C9orf47-203ENST00000375851 SPRR4Q96PI1 79 aa8.7□□□□□ -1.02
C9orf47-203ENST00000375851 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
C9orf47-203ENST00000375851 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
C9orf47-203ENST00000375851 DSCR10P59022 87 aa8.7□□□□□ -1.02
C9orf47-203ENST00000375851 FRYLO94915 3013 aa8.7□□□□□ -1.02
C9orf47-203ENST00000375851 IGLV5-48A0A075B6I7 105 aa8.69□□□□□ -1.02
C9orf47-203ENST00000375851 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
C9orf47-203ENST00000375851 VCANP13611 3396 aa8.69□□□□□ -1.02
C9orf47-203ENST00000375851 ATMQ13315 3056 aa8.69□□□□□ -1.02
C9orf47-203ENST00000375851 TACC2O95359 2948 aa8.69□□□□□ -1.02
C9orf47-203ENST00000375851 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
C9orf47-203ENST00000375851 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
C9orf47-203ENST00000375851 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
C9orf47-203ENST00000375851 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
C9orf47-203ENST00000375851 ITPR1Q14643 2758 aa8.67□□□□□ -1.02
C9orf47-203ENST00000375851 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
C9orf47-203ENST00000375851 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms