RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 A0A1W2PPM0 123 aa10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 KRTAP4-16G5E9R7 235 aaPredicted RBP10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 PSMB2P49721 201 aa10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 C6orf99Q4VX62 202 aa10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
HLA-DMA-201ENST00000374843 UBE2BP63146 152 aa10.72□□□□□ -0.69
HLA-DMA-201ENST00000374843 LYRM7Q5U5X0 104 aa10.72□□□□□ -0.69
HLA-DMA-201ENST00000374843 REG3GQ6UW15 175 aa10.71□□□□□ -0.69
HLA-DMA-201ENST00000374843 COX6CP09669 75 aa10.7□□□□□ -0.7
HLA-DMA-201ENST00000374843 FABP2P12104 132 aa10.69□□□□□ -0.7
HLA-DMA-201ENST00000374843 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
HLA-DMA-201ENST00000374843 H0YGX0 51 aa10.68□□□□□ -0.7
HLA-DMA-201ENST00000374843 XGP55808 180 aa10.67□□□□□ -0.7
HLA-DMA-201ENST00000374843 HAMPP81172 84 aa10.67□□□□□ -0.7
HLA-DMA-201ENST00000374843 VAMP3Q15836 100 aa10.67□□□□□ -0.7
HLA-DMA-201ENST00000374843 EPPK1P58107 5090 aaKnown RBP10.66□□□□□ -0.7
HLA-DMA-201ENST00000374843 B5MCH6 92 aa10.66□□□□□ -0.7
HLA-DMA-201ENST00000374843 COX7BP24311 80 aa10.66□□□□□ -0.7
HLA-DMA-201ENST00000374843 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
HLA-DMA-201ENST00000374843 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.7
HLA-DMA-201ENST00000374843 BCE1O60756 84 aa10.65□□□□□ -0.7
HLA-DMA-201ENST00000374843 SCGB1C2P0DMR2 95 aa10.65□□□□□ -0.7
HLA-DMA-201ENST00000374843 Q6ZRX8 168 aa10.65□□□□□ -0.7
HLA-DMA-201ENST00000374843 PSORS1C2Q9UIG4 136 aa10.65□□□□□ -0.7
HLA-DMA-201ENST00000374843 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
HLA-DMA-201ENST00000374843 FAM218AQ96MZ4 157 aa10.64□□□□□ -0.71
HLA-DMA-201ENST00000374843 H0Y9J4 135 aa10.63□□□□□ -0.71
HLA-DMA-201ENST00000374843 LST1O00453 97 aa10.63□□□□□ -0.71
HLA-DMA-201ENST00000374843 TCL1BO95988 128 aa10.63□□□□□ -0.71
HLA-DMA-201ENST00000374843 CLEC2BQ92478 149 aa10.63□□□□□ -0.71
HLA-DMA-201ENST00000374843 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
HLA-DMA-201ENST00000374843 A0A1B0GX51 115 aa10.62□□□□□ -0.71
HLA-DMA-201ENST00000374843 K7EP34 96 aa10.62□□□□□ -0.71
HLA-DMA-201ENST00000374843 LINC00575Q6W349 94 aa10.62□□□□□ -0.71
HLA-DMA-201ENST00000374843 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
HLA-DMA-201ENST00000374843 RYR1P21817 5038 aa10.61□□□□□ -0.71
HLA-DMA-201ENST00000374843 A0A1B0GV90 55 aa10.61□□□□□ -0.71
HLA-DMA-201ENST00000374843 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
HLA-DMA-201ENST00000374843 TRACP01848 142 aa10.6□□□□□ -0.71
HLA-DMA-201ENST00000374843 INAFM2P0DMQ5 153 aa10.6□□□□□ -0.71
HLA-DMA-201ENST00000374843 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
HLA-DMA-201ENST00000374843 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
HLA-DMA-201ENST00000374843 Q9BRP9 147 aa10.59□□□□□ -0.71
HLA-DMA-201ENST00000374843 DHRS4-AS1Q9P1J3 65 aa10.58□□□□□ -0.72
HLA-DMA-201ENST00000374843 HSPG2P98160 4391 aa10.57□□□□□ -0.72
HLA-DMA-201ENST00000374843 PRLHP81277 87 aa10.57□□□□□ -0.72
HLA-DMA-201ENST00000374843 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
HLA-DMA-201ENST00000374843 GTF2H5Q6ZYL4 71 aa10.57□□□□□ -0.72
HLA-DMA-201ENST00000374843 SLC25A20O43772 301 aa10.56□□□□□ -0.72
HLA-DMA-201ENST00000374843 UBE2AP49459 152 aa10.56□□□□□ -0.72
HLA-DMA-201ENST00000374843 SMCR5Q8TEV8 140 aa10.56□□□□□ -0.72
HLA-DMA-201ENST00000374843 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
HLA-DMA-201ENST00000374843 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
HLA-DMA-201ENST00000374843 FAT1Q14517 4588 aa10.54□□□□□ -0.72
HLA-DMA-201ENST00000374843 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
HLA-DMA-201ENST00000374843 H3BMG7 143 aa10.53□□□□□ -0.72
HLA-DMA-201ENST00000374843 SNCGO76070 127 aa10.53□□□□□ -0.72
HLA-DMA-201ENST00000374843 ZNF861PO60384 105 aa10.52□□□□□ -0.73
HLA-DMA-201ENST00000374843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.52□□□□□ -0.73
HLA-DMA-201ENST00000374843 DNAL4O96015 105 aa10.51□□□□□ -0.73
HLA-DMA-201ENST00000374843 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
HLA-DMA-201ENST00000374843 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
HLA-DMA-201ENST00000374843 HIGD2AQ9BW72 106 aa10.5□□□□□ -0.73
HLA-DMA-201ENST00000374843 UBE2V1Q13404 147 aa10.49□□□□□ -0.73
HLA-DMA-201ENST00000374843 Q6ZQY7 126 aa10.49□□□□□ -0.73
HLA-DMA-201ENST00000374843 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
HLA-DMA-201ENST00000374843 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
HLA-DMA-201ENST00000374843 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
HLA-DMA-201ENST00000374843 PRO0461Q9UI25 63 aa10.48□□□□□ -0.73
HLA-DMA-201ENST00000374843 BIRC6Q9NR09 4857 aa10.47□□□□□ -0.73
HLA-DMA-201ENST00000374843 IGLV5-48A0A075B6I7 105 aa10.47□□□□□ -0.73
HLA-DMA-201ENST00000374843 C9JAW5 83 aa10.47□□□□□ -0.73
HLA-DMA-201ENST00000374843 OCIAD2Q56VL3 154 aa10.47□□□□□ -0.73
HLA-DMA-201ENST00000374843 LINC01600Q96MT4 127 aa10.46□□□□□ -0.73
HLA-DMA-201ENST00000374843 ORMDL1Q9P0S3 153 aa10.46□□□□□ -0.73
HLA-DMA-201ENST00000374843 H3BQ85 93 aa10.45□□□□□ -0.74
HLA-DMA-201ENST00000374843 H3BT86 120 aa10.45□□□□□ -0.74
HLA-DMA-201ENST00000374843 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
HLA-DMA-201ENST00000374843 PPDPFLQ8WWR9 84 aa10.45□□□□□ -0.74
HLA-DMA-201ENST00000374843 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
HLA-DMA-201ENST00000374843 GHRHP01286 108 aa10.43□□□□□ -0.74
HLA-DMA-201ENST00000374843 ST20-AS1Q8NBB2 130 aa10.43□□□□□ -0.74
HLA-DMA-201ENST00000374843 SMCPP49901 116 aaPredicted RBP10.42□□□□□ -0.74
HLA-DMA-201ENST00000374843 MTURNQ8N3F0 131 aa10.42□□□□□ -0.74
HLA-DMA-201ENST00000374843 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
HLA-DMA-201ENST00000374843 SPRR1BP22528 89 aa10.41□□□□□ -0.74
HLA-DMA-201ENST00000374843 ZNF706Q9Y5V0 76 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMA-201ENST00000374843 SRRM2Q9UQ35 2752 aaKnown RBP10.41□□□□□ -0.74
HLA-DMA-201ENST00000374843 F8W1H4 67 aa10.4□□□□□ -0.74
HLA-DMA-201ENST00000374843 Q8N377 158 aa10.4□□□□□ -0.74
HLA-DMA-201ENST00000374843 ANKRD29Q8N6D5 301 aa10.4□□□□□ -0.74
HLA-DMA-201ENST00000374843 SPRR4Q96PI1 79 aa10.4□□□□□ -0.74
HLA-DMA-201ENST00000374843 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
HLA-DMA-201ENST00000374843 TMEM256-PLSCR3K7ERE1 68 aa10.39□□□□□ -0.75
HLA-DMA-201ENST00000374843 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
HLA-DMA-201ENST00000374843 LINC00483Q53H64 154 aa10.39□□□□□ -0.75
HLA-DMA-201ENST00000374843 TEX49A0A1B0GTD5 131 aa10.38□□□□□ -0.75
HLA-DMA-201ENST00000374843 Q5VSD8 79 aa10.37□□□□□ -0.75
HLA-DMA-201ENST00000374843 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms