RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
HLA-DOA-202ENST00000374813 ANAPC16Q96DE5 110 aa4.72□□□□□ -1.65
HLA-DOA-202ENST00000374813 PRO1933Q9H354 126 aa4.72□□□□□ -1.65
HLA-DOA-202ENST00000374813 MT-ND4LP03901 98 aa4.71□□□□□ -1.66
HLA-DOA-202ENST00000374813 LGALS3P17931 250 aaKnown RBP4.71□□□□□ -1.66
HLA-DOA-202ENST00000374813 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
HLA-DOA-202ENST00000374813 MIR7-3HGQ8N6C7 128 aa4.71□□□□□ -1.66
HLA-DOA-202ENST00000374813 HINT1P49773 126 aaPredicted RBP4.7□□□□□ -1.66
HLA-DOA-202ENST00000374813 AKR1D1P51857 326 aa4.7□□□□□ -1.66
HLA-DOA-202ENST00000374813 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
HLA-DOA-202ENST00000374813 TMEM170BQ5T4T1 132 aa4.7□□□□□ -1.66
HLA-DOA-202ENST00000374813 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
HLA-DOA-202ENST00000374813 TCL1BO95988 128 aa4.69□□□□□ -1.66
HLA-DOA-202ENST00000374813 PMCHL1Q16048 86 aa4.69□□□□□ -1.66
HLA-DOA-202ENST00000374813 S100A7L2Q5SY68 101 aa4.69□□□□□ -1.66
HLA-DOA-202ENST00000374813 C20orf166-AS1Q96NR2 134 aa4.69□□□□□ -1.66
HLA-DOA-202ENST00000374813 MAP1LC3CQ9BXW4 147 aa4.69□□□□□ -1.66
HLA-DOA-202ENST00000374813 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
HLA-DOA-202ENST00000374813 SMCO4Q9NRQ5 59 aa4.68□□□□□ -1.66
HLA-DOA-202ENST00000374813 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 TRAV23DV6A0A075B6W5 121 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 LOC107984156A0A0G2JMH3 177 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 ZNF73O43830 326 aaPredicted RBP4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 HERV-K104P63124 156 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 Q1RN00 199 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
HLA-DOA-202ENST00000374813 SPANXB1Q9NS25 103 aaPredicted RBP4.66□□□□□ -1.66
HLA-DOA-202ENST00000374813 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
HLA-DOA-202ENST00000374813 CBY1Q9Y3M2 126 aa4.66□□□□□ -1.66
HLA-DOA-202ENST00000374813 PCP2Q8IVA1 136 aa4.65□□□□□ -1.67
HLA-DOA-202ENST00000374813 OBSCN-AS1Q96MR7 158 aa4.65□□□□□ -1.67
HLA-DOA-202ENST00000374813 HBDP02042 147 aa4.64□□□□□ -1.67
HLA-DOA-202ENST00000374813 TAL2Q16559 108 aa4.64□□□□□ -1.67
HLA-DOA-202ENST00000374813 KMT2DO14686 5537 aa4.63□□□□□ -1.67
HLA-DOA-202ENST00000374813 TSPEAR-AS2P59090 65 aa4.63□□□□□ -1.67
HLA-DOA-202ENST00000374813 FABP9Q0Z7S8 132 aa4.63□□□□□ -1.67
HLA-DOA-202ENST00000374813 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
HLA-DOA-202ENST00000374813 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 TEX49A0A1B0GTD5 131 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 EIF4EBP3O60516 100 aaPredicted RBP4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 NDUFC2O95298 119 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 COMMD7Q86VX2 200 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 RPS10P5Q9NQ39 176 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 RBM12B-AS1Q9P1G2 102 aa4.62□□□□□ -1.67
HLA-DOA-202ENST00000374813 MYMXA0A1B0GTQ4 84 aa4.61□□□□□ -1.67
HLA-DOA-202ENST00000374813 LINC00614P0C842 121 aa4.61□□□□□ -1.67
HLA-DOA-202ENST00000374813 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
HLA-DOA-202ENST00000374813 SOSTDC1Q6X4U4 206 aa4.6□□□□□ -1.67
HLA-DOA-202ENST00000374813 DEFB105AQ8NG35 78 aa4.6□□□□□ -1.67
HLA-DOA-202ENST00000374813 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
HLA-DOA-202ENST00000374813 Q96NJ1 140 aa4.59□□□□□ -1.67
HLA-DOA-202ENST00000374813 NPC2P61916 151 aa4.58□□□□□ -1.68
HLA-DOA-202ENST00000374813 IFITM2Q01629 132 aa4.58□□□□□ -1.68
HLA-DOA-202ENST00000374813 TRAV12-1A0A0B4J245 112 aa4.57□□□□□ -1.68
HLA-DOA-202ENST00000374813 SEC11CQ9BY50 192 aa4.57□□□□□ -1.68
HLA-DOA-202ENST00000374813 S100PP25815 95 aa4.56□□□□□ -1.68
HLA-DOA-202ENST00000374813 Q6ZVH6 145 aa4.56□□□□□ -1.68
HLA-DOA-202ENST00000374813 IFI27L1Q96BM0 104 aa4.56□□□□□ -1.68
HLA-DOA-202ENST00000374813 A8MUU9 505 aa4.55□□□□□ -1.68
HLA-DOA-202ENST00000374813 RHEBQ15382 184 aa4.55□□□□□ -1.68
HLA-DOA-202ENST00000374813 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 COX19Q49B96 90 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 IGFL1Q6UW32 110 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
HLA-DOA-202ENST00000374813 A8MWP4 228 aa4.53□□□□□ -1.68
HLA-DOA-202ENST00000374813 LEPROTO15243 131 aa4.53□□□□□ -1.68
HLA-DOA-202ENST00000374813 COX7BP24311 80 aa4.53□□□□□ -1.68
HLA-DOA-202ENST00000374813 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
HLA-DOA-202ENST00000374813 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
HLA-DOA-202ENST00000374813 H0Y8G0 127 aa4.52□□□□□ -1.69
HLA-DOA-202ENST00000374813 J3QQQ9 107 aa4.52□□□□□ -1.69
HLA-DOA-202ENST00000374813 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
HLA-DOA-202ENST00000374813 IGLV5-48A0A075B6I7 105 aa4.51□□□□□ -1.69
HLA-DOA-202ENST00000374813 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
HLA-DOA-202ENST00000374813 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
HLA-DOA-202ENST00000374813 A6NN06 94 aa4.49□□□□□ -1.69
HLA-DOA-202ENST00000374813 HRES1P13985 223 aa4.49□□□□□ -1.69
HLA-DOA-202ENST00000374813 NMUP48645 174 aa4.49□□□□□ -1.69
HLA-DOA-202ENST00000374813 CLLU1Q5K131 121 aa4.49□□□□□ -1.69
HLA-DOA-202ENST00000374813 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
HLA-DOA-202ENST00000374813 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 F8WEM9 126 aa4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 LST1O00453 97 aa4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 CHCHD1Q96BP2 118 aaKnown RBP4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 LITAFQ99732 161 aa4.48□□□□□ -1.69
HLA-DOA-202ENST00000374813 ZNF815PA8K554 130 aa4.47□□□□□ -1.69
HLA-DOA-202ENST00000374813 Q6JHZ5 121 aa4.47□□□□□ -1.69
HLA-DOA-202ENST00000374813 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
HLA-DOA-202ENST00000374813 SPANXDQ9BXN6 97 aa4.47□□□□□ -1.69
HLA-DOA-202ENST00000374813 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
HLA-DOA-202ENST00000374813 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
HLA-DOA-202ENST00000374813 LINC00308Q8TCZ7 52 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms