RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 DEFB131BA0A096LNP1 70 aa11.76□□□□□ -0.53
PHF1-201ENST00000374512 NKAPP1Q8N9T2 125 aa11.76□□□□□ -0.53
PHF1-201ENST00000374512 C11orf45Q8TAV5 145 aa11.75□□□□□ -0.53
PHF1-201ENST00000374512 PLA2G2DQ9UNK4 145 aa11.75□□□□□ -0.53
PHF1-201ENST00000374512 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
PHF1-201ENST00000374512 A0A1B0GW54 56 aa11.74□□□□□ -0.53
PHF1-201ENST00000374512 NDUFC1O43677 76 aa11.74□□□□□ -0.53
PHF1-201ENST00000374512 OXTP01178 125 aa11.74□□□□□ -0.53
PHF1-201ENST00000374512 C5orf47Q569G3 176 aa11.74□□□□□ -0.53
PHF1-201ENST00000374512 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
PHF1-201ENST00000374512 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
PHF1-201ENST00000374512 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
PHF1-201ENST00000374512 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
PHF1-201ENST00000374512 ERC2-IT1O76042 136 aa11.71□□□□□ -0.53
PHF1-201ENST00000374512 NREPQ16612 68 aa11.71□□□□□ -0.53
PHF1-201ENST00000374512 IGLV5-48A0A075B6I7 105 aa11.71□□□□□ -0.54
PHF1-201ENST00000374512 SCXQ7RTU7 201 aa11.71□□□□□ -0.54
PHF1-201ENST00000374512 C7orf33Q8WU49 177 aa11.71□□□□□ -0.54
PHF1-201ENST00000374512 SERP1Q9Y6X1 66 aa11.71□□□□□ -0.54
PHF1-201ENST00000374512 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
PHF1-201ENST00000374512 DNAH3Q8TD57 4116 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 IGLV5-37A0A075B6J1 123 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 BPY2O14599 106 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 Q8N377 158 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 TM2D3Q9BRN9 247 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 ANK2Q01484 3957 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 MAST4O15021 2626 aa11.68□□□□□ -0.54
PHF1-201ENST00000374512 PRYO14603 147 aa11.67□□□□□ -0.54
PHF1-201ENST00000374512 SERTAD4-AS1Q5TG53 156 aa11.67□□□□□ -0.54
PHF1-201ENST00000374512 PKD1L1Q8TDX9 2849 aa11.66□□□□□ -0.54
PHF1-201ENST00000374512 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
PHF1-201ENST00000374512 Q6ZRX8 168 aa11.66□□□□□ -0.54
PHF1-201ENST00000374512 ATP5EP56381 51 aaPredicted RBP11.65□□□□□ -0.54
PHF1-201ENST00000374512 MRAPQ8TCY5 172 aa11.65□□□□□ -0.54
PHF1-201ENST00000374512 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
PHF1-201ENST00000374512 RMI2Q96E14 147 aa11.64□□□□□ -0.55
PHF1-201ENST00000374512 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
PHF1-201ENST00000374512 SPRR1AP35321 89 aa11.64□□□□□ -0.55
PHF1-201ENST00000374512 TENM3Q9P273 2699 aa11.64□□□□□ -0.55
PHF1-201ENST00000374512 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
PHF1-201ENST00000374512 Q5XG85 94 aa11.63□□□□□ -0.55
PHF1-201ENST00000374512 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
PHF1-201ENST00000374512 F8WEM9 126 aa11.63□□□□□ -0.55
PHF1-201ENST00000374512 DEFB105AQ8NG35 78 aa11.62□□□□□ -0.55
PHF1-201ENST00000374512 ETDCA0A1B0GVM5 59 aa11.6□□□□□ -0.55
PHF1-201ENST00000374512 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
PHF1-201ENST00000374512 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
PHF1-201ENST00000374512 OCR1Q9BZK8 76 aa11.59□□□□□ -0.55
PHF1-201ENST00000374512 TNP2Q05952 138 aa11.59□□□□□ -0.55
PHF1-201ENST00000374512 Q9BRP9 147 aa11.58□□□□□ -0.56
PHF1-201ENST00000374512 Q8N9L7 120 aa11.58□□□□□ -0.56
PHF1-201ENST00000374512 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
PHF1-201ENST00000374512 C4orf26Q17RF5 130 aa11.56□□□□□ -0.56
PHF1-201ENST00000374512 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
PHF1-201ENST00000374512 RPL37AP8A6NKH3 93 aa11.55□□□□□ -0.56
PHF1-201ENST00000374512 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
PHF1-201ENST00000374512 Q8NBF4 154 aa11.55□□□□□ -0.56
PHF1-201ENST00000374512 A0A1W2PNM2 257 aa11.54□□□□□ -0.56
PHF1-201ENST00000374512 SPRR4Q96PI1 79 aa11.54□□□□□ -0.56
PHF1-201ENST00000374512 K7EIL1 84 aa11.54□□□□□ -0.56
PHF1-201ENST00000374512 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
PHF1-201ENST00000374512 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
PHF1-201ENST00000374512 SMIM26A0A096LP01 95 aa11.53□□□□□ -0.56
PHF1-201ENST00000374512 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
PHF1-201ENST00000374512 A0A0U1RQV1 116 aa11.52□□□□□ -0.56
PHF1-201ENST00000374512 FAM168BA1KXE4 195 aa11.52□□□□□ -0.56
PHF1-201ENST00000374512 KRTAP7-1Q8IUC3 87 aa11.51□□□□□ -0.57
PHF1-201ENST00000374512 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
PHF1-201ENST00000374512 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
PHF1-201ENST00000374512 ST20-AS1Q8NBB2 130 aa11.48□□□□□ -0.57
PHF1-201ENST00000374512 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
PHF1-201ENST00000374512 UBE2BP63146 152 aa11.46□□□□□ -0.57
PHF1-201ENST00000374512 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.58
PHF1-201ENST00000374512 LCE6AA0A183 80 aa11.45□□□□□ -0.58
PHF1-201ENST00000374512 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
PHF1-201ENST00000374512 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
PHF1-201ENST00000374512 DSCR10P59022 87 aa11.41□□□□□ -0.58
PHF1-201ENST00000374512 FP248Q71RG6 208 aaPredicted RBP11.4□□□□□ -0.58
PHF1-201ENST00000374512 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.59
PHF1-201ENST00000374512 HIGD2AQ9BW72 106 aa11.39□□□□□ -0.59
PHF1-201ENST00000374512 LINC00476Q8WZB0 136 aa11.38□□□□□ -0.59
PHF1-201ENST00000374512 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
PHF1-201ENST00000374512 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
PHF1-201ENST00000374512 C16orf90A8MZG2 172 aa11.36□□□□□ -0.59
PHF1-201ENST00000374512 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
PHF1-201ENST00000374512 K7EQZ3 153 aa11.35□□□□□ -0.59
PHF1-201ENST00000374512 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
PHF1-201ENST00000374512 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.6
PHF1-201ENST00000374512 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
PHF1-201ENST00000374512 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
PHF1-201ENST00000374512 A0A096LNI7 61 aa11.31□□□□□ -0.6
PHF1-201ENST00000374512 PSCAO43653 123 aa11.3□□□□□ -0.6
PHF1-201ENST00000374512 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
PHF1-201ENST00000374512 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
PHF1-201ENST00000374512 PRO0628Q9UI54 55 aa11.28□□□□□ -0.6
PHF1-201ENST00000374512 H0Y9J4 135 aa11.27□□□□□ -0.61
PHF1-201ENST00000374512 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
PHF1-201ENST00000374512 MDFIQ99750 246 aa11.27□□□□□ -0.61
PHF1-201ENST00000374512 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
PHF1-201ENST00000374512 PRLHP81277 87 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms