RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CRYGAP11844 174 aa9.2□□□□□ -0.94
HMGCL-203ENST00000374490 SERP2Q8N6R1 65 aa9.2□□□□□ -0.94
HMGCL-203ENST00000374490 TRAV10A0A0B4J240 114 aa9.18□□□□□ -0.94
HMGCL-203ENST00000374490 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
HMGCL-203ENST00000374490 A0A087WVE0 104 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 TRBV7-4A0A0J9YYF1 115 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 BCE1O60756 84 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 COL7A1Q02388 2944 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 Q6ZRP5 223 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 RMI2Q96E14 147 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 PLA2G2DQ9UNK4 145 aa9.16□□□□□ -0.94
HMGCL-203ENST00000374490 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
HMGCL-203ENST00000374490 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
HMGCL-203ENST00000374490 CXCL6P80162 114 aa9.13□□□□□ -0.95
HMGCL-203ENST00000374490 Q6ZVQ6 151 aa9.13□□□□□ -0.95
HMGCL-203ENST00000374490 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
HMGCL-203ENST00000374490 RYR2Q92736 4967 aa9.12□□□□□ -0.95
HMGCL-203ENST00000374490 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
HMGCL-203ENST00000374490 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
HMGCL-203ENST00000374490 FAM19A1Q7Z5A9 133 aa9.11□□□□□ -0.95
HMGCL-203ENST00000374490 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 M0R2N4 97 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 PRYO14603 147 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 HAMPP81172 84 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
HMGCL-203ENST00000374490 HUWE1Q7Z6Z7 4374 aaKnown RBP9.08□□□□□ -0.96
HMGCL-203ENST00000374490 LCE6AA0A183 80 aa9.08□□□□□ -0.96
HMGCL-203ENST00000374490 TMEM258P61165 79 aa9.07□□□□□ -0.96
HMGCL-203ENST00000374490 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
HMGCL-203ENST00000374490 SACSQ9NZJ4 4579 aa9.06□□□□□ -0.96
HMGCL-203ENST00000374490 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
HMGCL-203ENST00000374490 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
HMGCL-203ENST00000374490 DYNC2H1Q8NCM8 4307 aaKnown RBP9.05□□□□□ -0.96
HMGCL-203ENST00000374490 EPPK1P58107 5090 aaKnown RBP9.03□□□□□ -0.96
HMGCL-203ENST00000374490 TRAV7A0A075B6U4 112 aa9.03□□□□□ -0.96
HMGCL-203ENST00000374490 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
HMGCL-203ENST00000374490 A0A1B0GW54 56 aa9.03□□□□□ -0.96
HMGCL-203ENST00000374490 SPRR1AP35321 89 aa9.02□□□□□ -0.96
HMGCL-203ENST00000374490 Q6ZRX8 168 aa9.02□□□□□ -0.96
HMGCL-203ENST00000374490 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
HMGCL-203ENST00000374490 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
HMGCL-203ENST00000374490 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
HMGCL-203ENST00000374490 J3KT08 172 aa9.01□□□□□ -0.97
HMGCL-203ENST00000374490 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
HMGCL-203ENST00000374490 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
HMGCL-203ENST00000374490 RPS28P62857 69 aaKnown RBP9□□□□□ -0.97
HMGCL-203ENST00000374490 Q8N377 158 aa8.99□□□□□ -0.97
HMGCL-203ENST00000374490 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
HMGCL-203ENST00000374490 NREPQ16612 68 aa8.97□□□□□ -0.97
HMGCL-203ENST00000374490 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.97
HMGCL-203ENST00000374490 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.97
HMGCL-203ENST00000374490 FUSP35637 526 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGCL-203ENST00000374490 DEFB105AQ8NG35 78 aa8.96□□□□□ -0.98
HMGCL-203ENST00000374490 CYSTM1Q9H1C7 97 aa8.96□□□□□ -0.98
HMGCL-203ENST00000374490 RPL37AP8A6NKH3 93 aa8.95□□□□□ -0.98
HMGCL-203ENST00000374490 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
HMGCL-203ENST00000374490 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
HMGCL-203ENST00000374490 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
HMGCL-203ENST00000374490 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
HMGCL-203ENST00000374490 Q9BRP9 147 aa8.94□□□□□ -0.98
HMGCL-203ENST00000374490 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
HMGCL-203ENST00000374490 TNP2Q05952 138 aa8.93□□□□□ -0.98
HMGCL-203ENST00000374490 SCXQ7RTU7 201 aa8.93□□□□□ -0.98
HMGCL-203ENST00000374490 FAM19A5Q7Z5A7 132 aaPredicted RBP8.93□□□□□ -0.98
HMGCL-203ENST00000374490 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
HMGCL-203ENST00000374490 BPY2O14599 106 aa8.92□□□□□ -0.98
HMGCL-203ENST00000374490 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
HMGCL-203ENST00000374490 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
HMGCL-203ENST00000374490 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
HMGCL-203ENST00000374490 KLKP1Q107X0 134 aa8.91□□□□□ -0.98
HMGCL-203ENST00000374490 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
HMGCL-203ENST00000374490 APLNQ9ULZ1 77 aa8.91□□□□□ -0.98
HMGCL-203ENST00000374490 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
HMGCL-203ENST00000374490 ERC2-IT1O76042 136 aa8.9□□□□□ -0.99
HMGCL-203ENST00000374490 IGKV4-1P06312 121 aa8.9□□□□□ -0.99
HMGCL-203ENST00000374490 UBE2BP63146 152 aa8.9□□□□□ -0.99
HMGCL-203ENST00000374490 C1orf137Q5JT78 98 aa8.9□□□□□ -0.99
HMGCL-203ENST00000374490 Q8NBF4 154 aa8.9□□□□□ -0.99
HMGCL-203ENST00000374490 C16orf90A8MZG2 172 aa8.89□□□□□ -0.99
HMGCL-203ENST00000374490 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
HMGCL-203ENST00000374490 HYDINQ4G0P3 5121 aa8.89□□□□□ -0.99
HMGCL-203ENST00000374490 NDUFC1O43677 76 aa8.88□□□□□ -0.99
HMGCL-203ENST00000374490 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
HMGCL-203ENST00000374490 A0A1W2PNM2 257 aa8.87□□□□□ -0.99
HMGCL-203ENST00000374490 F8WEM9 126 aa8.87□□□□□ -0.99
HMGCL-203ENST00000374490 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
HMGCL-203ENST00000374490 LYSTQ99698 3801 aa8.87□□□□□ -0.99
HMGCL-203ENST00000374490 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
HMGCL-203ENST00000374490 PSCAO43653 123 aa8.86□□□□□ -0.99
HMGCL-203ENST00000374490 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
HMGCL-203ENST00000374490 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
HMGCL-203ENST00000374490 A0A096LNI7 61 aa8.83□□□□□ -1
HMGCL-203ENST00000374490 H7BZZ5 65 aa8.83□□□□□ -1
HMGCL-203ENST00000374490 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
HMGCL-203ENST00000374490 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
HMGCL-203ENST00000374490 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms