RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
TRAF1-201ENST00000373887 CEP350Q5VT06 3117 aa9.54□□□□□ -0.88
TRAF1-201ENST00000373887 LINC01554Q52M75 96 aa9.54□□□□□ -0.88
TRAF1-201ENST00000373887 F8P00451 2351 aa9.54□□□□□ -0.88
TRAF1-201ENST00000373887 A0A096LNT2 108 aa9.53□□□□□ -0.88
TRAF1-201ENST00000373887 A0A0D9SG42 100 aa9.52□□□□□ -0.89
TRAF1-201ENST00000373887 CYP4F30PQ9H0H9 118 aa9.51□□□□□ -0.89
TRAF1-201ENST00000373887 A0A0G2JQZ4 141 aa9.51□□□□□ -0.89
TRAF1-201ENST00000373887 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
TRAF1-201ENST00000373887 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
TRAF1-201ENST00000373887 EPG5Q9HCE0 2579 aa9.49□□□□□ -0.89
TRAF1-201ENST00000373887 IGFL1Q6UW32 110 aa9.49□□□□□ -0.89
TRAF1-201ENST00000373887 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
TRAF1-201ENST00000373887 IGLV1-50A0A075B6I6 118 aa9.47□□□□□ -0.89
TRAF1-201ENST00000373887 LITAFQ99732 161 aa9.47□□□□□ -0.89
TRAF1-201ENST00000373887 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.89
TRAF1-201ENST00000373887 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
TRAF1-201ENST00000373887 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
TRAF1-201ENST00000373887 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
TRAF1-201ENST00000373887 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
TRAF1-201ENST00000373887 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
TRAF1-201ENST00000373887 ERC2-IT1O76042 136 aa9.43□□□□□ -0.9
TRAF1-201ENST00000373887 PCNTO95613 3336 aa9.43□□□□□ -0.9
TRAF1-201ENST00000373887 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
TRAF1-201ENST00000373887 PRR15Q8IV56 129 aa9.42□□□□□ -0.9
TRAF1-201ENST00000373887 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.91
TRAF1-201ENST00000373887 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
TRAF1-201ENST00000373887 KRTAP1-1Q07627 177 aa9.39□□□□□ -0.91
TRAF1-201ENST00000373887 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
TRAF1-201ENST00000373887 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
TRAF1-201ENST00000373887 Q8N1X5 172 aa9.38□□□□□ -0.91
TRAF1-201ENST00000373887 A0A087WTM6 91 aa9.38□□□□□ -0.91
TRAF1-201ENST00000373887 KTN1-AS1Q86SY8 53 aa9.37□□□□□ -0.91
TRAF1-201ENST00000373887 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
TRAF1-201ENST00000373887 ZNF575Q86XF7 245 aa9.36□□□□□ -0.91
TRAF1-201ENST00000373887 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
TRAF1-201ENST00000373887 CD164Q04900 197 aa9.36□□□□□ -0.91
TRAF1-201ENST00000373887 CASC10Q5T4H9 136 aa9.35□□□□□ -0.91
TRAF1-201ENST00000373887 FLNBO75369 2602 aaKnown RBP9.35□□□□□ -0.91
TRAF1-201ENST00000373887 LCA10Q71F78 164 aa9.35□□□□□ -0.91
TRAF1-201ENST00000373887 Q8N377 158 aa9.35□□□□□ -0.91
TRAF1-201ENST00000373887 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
TRAF1-201ENST00000373887 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-201ENST00000373887 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
TRAF1-201ENST00000373887 RBM12B-AS1Q9P1G2 102 aa9.34□□□□□ -0.91
TRAF1-201ENST00000373887 ZNF861PO60384 105 aa9.33□□□□□ -0.92
TRAF1-201ENST00000373887 PRRC2CQ9Y520 2896 aaKnown RBP9.33□□□□□ -0.92
TRAF1-201ENST00000373887 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
TRAF1-201ENST00000373887 LUZP6Q538Z0 58 aa9.3□□□□□ -0.92
TRAF1-201ENST00000373887 KLKP1Q107X0 134 aa9.3□□□□□ -0.92
TRAF1-201ENST00000373887 H7BZZ5 65 aa9.29□□□□□ -0.92
TRAF1-201ENST00000373887 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.93
TRAF1-201ENST00000373887 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
TRAF1-201ENST00000373887 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
TRAF1-201ENST00000373887 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
TRAF1-201ENST00000373887 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.94
TRAF1-201ENST00000373887 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
TRAF1-201ENST00000373887 TNP2Q05952 138 aa9.2□□□□□ -0.94
TRAF1-201ENST00000373887 LAMA3Q16787 3333 aa9.18□□□□□ -0.94
TRAF1-201ENST00000373887 BRCA2P51587 3418 aa9.18□□□□□ -0.94
TRAF1-201ENST00000373887 BPTFQ12830 3046 aa9.18□□□□□ -0.94
TRAF1-201ENST00000373887 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
TRAF1-201ENST00000373887 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
TRAF1-201ENST00000373887 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
TRAF1-201ENST00000373887 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
TRAF1-201ENST00000373887 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
TRAF1-201ENST00000373887 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
TRAF1-201ENST00000373887 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
TRAF1-201ENST00000373887 Q1T7F1 81 aa9.15□□□□□ -0.95
TRAF1-201ENST00000373887 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
TRAF1-201ENST00000373887 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
TRAF1-201ENST00000373887 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
TRAF1-201ENST00000373887 HTTP42858 3142 aa9.13□□□□□ -0.95
TRAF1-201ENST00000373887 WIPF1O43516 503 aa9.13□□□□□ -0.95
TRAF1-201ENST00000373887 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
TRAF1-201ENST00000373887 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
TRAF1-201ENST00000373887 Q6ZSA8 131 aa9.1□□□□□ -0.95
TRAF1-201ENST00000373887 M0R2T5 61 aa9.09□□□□□ -0.96
TRAF1-201ENST00000373887 FLNAP21333 2647 aaKnown RBP9.07□□□□□ -0.96
TRAF1-201ENST00000373887 A0A1B0GU33 70 aa9.06□□□□□ -0.96
TRAF1-201ENST00000373887 ITPR3Q14573 2671 aa9.05□□□□□ -0.96
TRAF1-201ENST00000373887 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
TRAF1-201ENST00000373887 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
TRAF1-201ENST00000373887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
TRAF1-201ENST00000373887 CHD9Q3L8U1 2897 aa9.01□□□□□ -0.97
TRAF1-201ENST00000373887 CR1P17927 2039 aa9□□□□□ -0.97
TRAF1-201ENST00000373887 PRUNE2Q8WUY3 3088 aa9□□□□□ -0.97
TRAF1-201ENST00000373887 HRES1P13985 223 aa8.99□□□□□ -0.97
TRAF1-201ENST00000373887 PRAC1Q96KF2 57 aa8.99□□□□□ -0.97
TRAF1-201ENST00000373887 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
TRAF1-201ENST00000373887 CFAP46Q8IYW2 2715 aa8.98□□□□□ -0.97
TRAF1-201ENST00000373887 OCR1Q9BZK8 76 aa8.97□□□□□ -0.97
TRAF1-201ENST00000373887 H3BS24 57 aa8.95□□□□□ -0.98
TRAF1-201ENST00000373887 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
TRAF1-201ENST00000373887 S4R3F8 94 aa8.93□□□□□ -0.98
TRAF1-201ENST00000373887 Q75L30 129 aa8.92□□□□□ -0.98
TRAF1-201ENST00000373887 XIRP2A4UGR9 3374 aa8.92□□□□□ -0.98
TRAF1-201ENST00000373887 CFAP54Q96N23 3096 aa8.91□□□□□ -0.98
TRAF1-201ENST00000373887 ATRQ13535 2644 aa8.91□□□□□ -0.98
TRAF1-201ENST00000373887 MAST4O15021 2626 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms