RNA–Protein interactions for RNA: ENST00000373735.1

CTNNA3-202, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 1,083 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-202ENST00000373735 TOMM6Q96B49 74 aa4.41□□□□□ -1.7
CTNNA3-202ENST00000373735 NAT8Q9UHE5 227 aa4.41□□□□□ -1.7
CTNNA3-202ENST00000373735 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
CTNNA3-202ENST00000373735 H3BRM9 83 aa4.4□□□□□ -1.71
CTNNA3-202ENST00000373735 MT3P25713 68 aa4.4□□□□□ -1.71
CTNNA3-202ENST00000373735 SPRR1AP35321 89 aa4.4□□□□□ -1.71
CTNNA3-202ENST00000373735 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
CTNNA3-202ENST00000373735 ETDCA0A1B0GVM5 59 aa4.39□□□□□ -1.71
CTNNA3-202ENST00000373735 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
CTNNA3-202ENST00000373735 ALKAL2Q6UX46 152 aa4.39□□□□□ -1.71
CTNNA3-202ENST00000373735 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
CTNNA3-202ENST00000373735 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
CTNNA3-202ENST00000373735 KRTAP4-16G5E9R7 235 aaPredicted RBP4.38□□□□□ -1.71
CTNNA3-202ENST00000373735 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
CTNNA3-202ENST00000373735 CST9LQ9H4G1 147 aa4.38□□□□□ -1.71
CTNNA3-202ENST00000373735 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
CTNNA3-202ENST00000373735 TAL2Q16559 108 aa4.37□□□□□ -1.71
CTNNA3-202ENST00000373735 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
CTNNA3-202ENST00000373735 IGLV6-57P01721 117 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 ADCYAP1P18509 176 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 PMVKQ15126 192 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 C9orf153Q5TBE3 101 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 TCTE3Q8IZS6 198 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 ZNF625Q96I27 306 aaPredicted RBP4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
CTNNA3-202ENST00000373735 S100A12P80511 92 aa4.35□□□□□ -1.71
CTNNA3-202ENST00000373735 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
CTNNA3-202ENST00000373735 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
CTNNA3-202ENST00000373735 ERC2-IT1O76042 136 aa4.34□□□□□ -1.71
CTNNA3-202ENST00000373735 LINC00158P58513 81 aa4.34□□□□□ -1.71
CTNNA3-202ENST00000373735 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
CTNNA3-202ENST00000373735 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
CTNNA3-202ENST00000373735 C9JQL5 133 aa4.33□□□□□ -1.72
CTNNA3-202ENST00000373735 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
CTNNA3-202ENST00000373735 COX19Q49B96 90 aa4.33□□□□□ -1.72
CTNNA3-202ENST00000373735 TRBV10-3A0A0K0K1G6 114 aa4.32□□□□□ -1.72
CTNNA3-202ENST00000373735 E9PLD3 99 aa4.32□□□□□ -1.72
CTNNA3-202ENST00000373735 NCR3O14931 201 aa4.32□□□□□ -1.72
CTNNA3-202ENST00000373735 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
CTNNA3-202ENST00000373735 PEA15Q15121 130 aa4.31□□□□□ -1.72
CTNNA3-202ENST00000373735 Q6ZRX8 168 aa4.31□□□□□ -1.72
CTNNA3-202ENST00000373735 Q9BRP9 147 aa4.31□□□□□ -1.72
CTNNA3-202ENST00000373735 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
CTNNA3-202ENST00000373735 LINC01546A6NGU7 62 aa4.3□□□□□ -1.72
CTNNA3-202ENST00000373735 Q6Q795 121 aa4.3□□□□□ -1.72
CTNNA3-202ENST00000373735 JOSD1Q15040 202 aaPredicted RBP4.29□□□□□ -1.72
CTNNA3-202ENST00000373735 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
CTNNA3-202ENST00000373735 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
CTNNA3-202ENST00000373735 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
CTNNA3-202ENST00000373735 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 DDTP30046 118 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 NDUFA6P56556 154 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 TMEM170BQ5T4T1 132 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 MIR7-3HGQ8N6C7 128 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
CTNNA3-202ENST00000373735 MT-ND4LP03901 98 aa4.26□□□□□ -1.73
CTNNA3-202ENST00000373735 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
CTNNA3-202ENST00000373735 CD164Q04900 197 aa4.26□□□□□ -1.73
CTNNA3-202ENST00000373735 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CTNNA3-202ENST00000373735 Q5XG85 94 aa4.26□□□□□ -1.73
CTNNA3-202ENST00000373735 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 C11orf86A6NJI1 115 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 SPRR1BP22528 89 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
CTNNA3-202ENST00000373735 C1orf195Q5TG92 126 aa4.24□□□□□ -1.73
CTNNA3-202ENST00000373735 SMCO4Q9NRQ5 59 aa4.24□□□□□ -1.73
CTNNA3-202ENST00000373735 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
CTNNA3-202ENST00000373735 LOC107984156A0A0G2JMH3 177 aa4.23□□□□□ -1.73
CTNNA3-202ENST00000373735 C20orf202A1L168 122 aa4.23□□□□□ -1.73
CTNNA3-202ENST00000373735 MT2AP02795 61 aa4.23□□□□□ -1.73
CTNNA3-202ENST00000373735 ARL17AQ8IVW1 177 aa4.23□□□□□ -1.73
CTNNA3-202ENST00000373735 TRAV23DV6A0A075B6W5 121 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 TMEM223A0PJW6 202 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 H7C2G1 150 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 BAGE3Q86Y29 109 aa4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 SPANXB1Q9NS25 103 aaPredicted RBP4.22□□□□□ -1.73
CTNNA3-202ENST00000373735 A6NDN8 102 aa4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 ZNF73O43830 326 aaPredicted RBP4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 PRO1933Q9H354 126 aa4.21□□□□□ -1.74
CTNNA3-202ENST00000373735 A0A096LNJ9 63 aa4.2□□□□□ -1.74
CTNNA3-202ENST00000373735 MYMXA0A1B0GTQ4 84 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 NDUFC2O95298 119 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 HBDP02042 147 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 MT1FP04733 61 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 Q6ZVH6 145 aa4.19□□□□□ -1.74
CTNNA3-202ENST00000373735 FAM240AA0A1B0GVK7 77 aa4.18□□□□□ -1.74
CTNNA3-202ENST00000373735 AKR1D1P51857 326 aa4.18□□□□□ -1.74
CTNNA3-202ENST00000373735 C10orf91Q5T1B1 145 aa4.18□□□□□ -1.74
CTNNA3-202ENST00000373735 COMMD7Q86VX2 200 aa4.18□□□□□ -1.74
CTNNA3-202ENST00000373735 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms