RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PLA2G2AP14555 144 aa7.1□□□□□ -1.27
TRERF1-203ENST00000372917 ZNF702PQ9H963 129 aa7.1□□□□□ -1.27
TRERF1-203ENST00000372917 J3QKU1 62 aa7.1□□□□□ -1.27
TRERF1-203ENST00000372917 SPINK7P58062 85 aa7.1□□□□□ -1.27
TRERF1-203ENST00000372917 RETNLBQ9BQ08 111 aa7.1□□□□□ -1.27
TRERF1-203ENST00000372917 Q6YL49 198 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 LINC00959A0A1B0GUT2 108 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
TRERF1-203ENST00000372917 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 Q8IZM0 81 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 FASNP49327 2511 aaKnown RBP7.09□□□□□ -1.27
TRERF1-203ENST00000372917 CHD6Q8TD26 2715 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 C16orf74Q96GX8 76 aa7.09□□□□□ -1.27
TRERF1-203ENST00000372917 C4orf3Q8WVX3 66 aa7.08□□□□□ -1.28
TRERF1-203ENST00000372917 COA5Q86WW8 74 aa7.08□□□□□ -1.28
TRERF1-203ENST00000372917 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
TRERF1-203ENST00000372917 F8P00451 2351 aa7.07□□□□□ -1.28
TRERF1-203ENST00000372917 K7EQZ3 153 aa7.07□□□□□ -1.28
TRERF1-203ENST00000372917 ITPR1Q14643 2758 aa7.06□□□□□ -1.28
TRERF1-203ENST00000372917 Q8NAQ8 132 aa7.06□□□□□ -1.28
TRERF1-203ENST00000372917 WFDC10BQ8IUB3 73 aa7.06□□□□□ -1.28
TRERF1-203ENST00000372917 Q9BRP9 147 aa7.06□□□□□ -1.28
TRERF1-203ENST00000372917 DEFB113Q30KQ7 82 aa7.05□□□□□ -1.28
TRERF1-203ENST00000372917 A0A0J9YWU9 116 aa7.05□□□□□ -1.28
TRERF1-203ENST00000372917 COX17Q14061 63 aa7.04□□□□□ -1.28
TRERF1-203ENST00000372917 DEFB135Q30KP9 77 aa7.04□□□□□ -1.28
TRERF1-203ENST00000372917 LINC00476Q8WZB0 136 aa7.03□□□□□ -1.28
TRERF1-203ENST00000372917 XAGE1AQ9HD64 81 aa7.03□□□□□ -1.28
TRERF1-203ENST00000372917 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
TRERF1-203ENST00000372917 KRTAP10-9P60411 292 aa7.02□□□□□ -1.29
TRERF1-203ENST00000372917 H0Y9P7 68 aa7.02□□□□□ -1.29
TRERF1-203ENST00000372917 NBEAL2Q6ZNJ1 2754 aa7.01□□□□□ -1.29
TRERF1-203ENST00000372917 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
TRERF1-203ENST00000372917 IGHV4-30-4P0DP06 118 aa7□□□□□ -1.29
TRERF1-203ENST00000372917 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
TRERF1-203ENST00000372917 PRO0255Q9UI72 69 aa7□□□□□ -1.29
TRERF1-203ENST00000372917 FLNCQ14315 2725 aa7□□□□□ -1.29
TRERF1-203ENST00000372917 KPRPQ5T749 579 aaPredicted RBP7□□□□□ -1.29
TRERF1-203ENST00000372917 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
TRERF1-203ENST00000372917 DSCR10P59022 87 aa6.99□□□□□ -1.29
TRERF1-203ENST00000372917 FLNAP21333 2647 aaKnown RBP6.99□□□□□ -1.29
TRERF1-203ENST00000372917 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
TRERF1-203ENST00000372917 REG3AQ06141 175 aa6.98□□□□□ -1.29
TRERF1-203ENST00000372917 DCHS2Q6V1P9 2916 aa6.98□□□□□ -1.29
TRERF1-203ENST00000372917 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
TRERF1-203ENST00000372917 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
TRERF1-203ENST00000372917 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
TRERF1-203ENST00000372917 KIAA0087Q14695 138 aa6.97□□□□□ -1.29
TRERF1-203ENST00000372917 USP24Q9UPU5 2620 aa6.97□□□□□ -1.29
TRERF1-203ENST00000372917 GCN1Q92616 2671 aaKnown RBP6.97□□□□□ -1.29
TRERF1-203ENST00000372917 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.29
TRERF1-203ENST00000372917 PCOTHQ58A44 107 aa6.96□□□□□ -1.3
TRERF1-203ENST00000372917 TEX15Q9BXT5 2789 aa6.96□□□□□ -1.3
TRERF1-203ENST00000372917 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
TRERF1-203ENST00000372917 CUBNO60494 3623 aa6.95□□□□□ -1.3
TRERF1-203ENST00000372917 ITPR3Q14573 2671 aa6.95□□□□□ -1.3
TRERF1-203ENST00000372917 A0A1W2PNM2 257 aa6.94□□□□□ -1.3
TRERF1-203ENST00000372917 H0Y9J4 135 aa6.94□□□□□ -1.3
TRERF1-203ENST00000372917 CFAP46Q8IYW2 2715 aa6.94□□□□□ -1.3
TRERF1-203ENST00000372917 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
TRERF1-203ENST00000372917 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
TRERF1-203ENST00000372917 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
TRERF1-203ENST00000372917 HRNRQ86YZ3 2850 aaPredicted RBP6.93□□□□□ -1.3
TRERF1-203ENST00000372917 C1orf134Q5TEV5 83 aa6.93□□□□□ -1.3
TRERF1-203ENST00000372917 CYSRT1A8MQ03 144 aa6.92□□□□□ -1.3
TRERF1-203ENST00000372917 CRYBG3Q68DQ2 2970 aa6.92□□□□□ -1.3
TRERF1-203ENST00000372917 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
TRERF1-203ENST00000372917 HECTD1Q9ULT8 2610 aa6.9□□□□□ -1.3
TRERF1-203ENST00000372917 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
TRERF1-203ENST00000372917 FLNBO75369 2602 aaKnown RBP6.89□□□□□ -1.31
TRERF1-203ENST00000372917 ATRQ13535 2644 aa6.89□□□□□ -1.31
TRERF1-203ENST00000372917 Q8N377 158 aa6.89□□□□□ -1.31
TRERF1-203ENST00000372917 Q8NBF4 154 aa6.89□□□□□ -1.31
TRERF1-203ENST00000372917 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
TRERF1-203ENST00000372917 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
TRERF1-203ENST00000372917 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
TRERF1-203ENST00000372917 H3BPC8 53 aa6.87□□□□□ -1.31
TRERF1-203ENST00000372917 FBN2P35556 2912 aa6.87□□□□□ -1.31
TRERF1-203ENST00000372917 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
TRERF1-203ENST00000372917 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
TRERF1-203ENST00000372917 Q6ZR54 194 aa6.86□□□□□ -1.31
TRERF1-203ENST00000372917 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
TRERF1-203ENST00000372917 IGLV1-51P01701 117 aa6.86□□□□□ -1.31
TRERF1-203ENST00000372917 NF1P21359 2839 aa6.86□□□□□ -1.31
TRERF1-203ENST00000372917 IGLV5-48A0A075B6I7 105 aa6.85□□□□□ -1.31
TRERF1-203ENST00000372917 SMR3AQ99954 134 aa6.85□□□□□ -1.31
TRERF1-203ENST00000372917 IGSF10Q6WRI0 2623 aa6.85□□□□□ -1.31
TRERF1-203ENST00000372917 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
TRERF1-203ENST00000372917 PLAC8Q9NZF1 115 aa6.85□□□□□ -1.31
TRERF1-203ENST00000372917 A0A0G2JQZ4 141 aa6.84□□□□□ -1.31
TRERF1-203ENST00000372917 A0A1W2PNN7 141 aa6.84□□□□□ -1.31
TRERF1-203ENST00000372917 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
TRERF1-203ENST00000372917 A0A1B0GW54 56 aa6.83□□□□□ -1.32
TRERF1-203ENST00000372917 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
TRERF1-203ENST00000372917 RTL8CO15255 209 aa6.82□□□□□ -1.32
TRERF1-203ENST00000372917 C6orf48Q9UBA6 75 aa6.81□□□□□ -1.32
TRERF1-203ENST00000372917 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
TRERF1-203ENST00000372917 HELZ2Q9BYK8 2649 aaKnown RBP6.81□□□□□ -1.32
TRERF1-203ENST00000372917 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
TRERF1-203ENST00000372917 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms