RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
RAPGEF1-201ENST00000372189 LINC00313P59037 77 aa8.97□□□□□ -0.97
RAPGEF1-201ENST00000372189 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
RAPGEF1-201ENST00000372189 DNAH10OSP0CZ25 163 aa8.96□□□□□ -0.98
RAPGEF1-201ENST00000372189 Q6ZRX8 168 aa8.96□□□□□ -0.98
RAPGEF1-201ENST00000372189 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
RAPGEF1-201ENST00000372189 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
RAPGEF1-201ENST00000372189 POLQO75417 2590 aa8.95□□□□□ -0.98
RAPGEF1-201ENST00000372189 UTRNP46939 3433 aa8.94□□□□□ -0.98
RAPGEF1-201ENST00000372189 Q6ZRP5 223 aa8.94□□□□□ -0.98
RAPGEF1-201ENST00000372189 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
RAPGEF1-201ENST00000372189 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
RAPGEF1-201ENST00000372189 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
RAPGEF1-201ENST00000372189 LINC00483Q53H64 154 aa8.91□□□□□ -0.98
RAPGEF1-201ENST00000372189 MOBPQ13875 183 aa8.91□□□□□ -0.98
RAPGEF1-201ENST00000372189 SETD2Q9BYW2 2564 aaPredicted RBP8.9□□□□□ -0.98
RAPGEF1-201ENST00000372189 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.98
RAPGEF1-201ENST00000372189 MTORP42345 2549 aa8.9□□□□□ -0.98
RAPGEF1-201ENST00000372189 CSAG1Q6PB30 78 aa8.9□□□□□ -0.98
RAPGEF1-201ENST00000372189 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
RAPGEF1-201ENST00000372189 DNAH12Q6ZR08 3092 aa8.89□□□□□ -0.99
RAPGEF1-201ENST00000372189 SPACA4Q8TDM5 124 aa8.89□□□□□ -0.99
RAPGEF1-201ENST00000372189 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
RAPGEF1-201ENST00000372189 Q5XG85 94 aa8.88□□□□□ -0.99
RAPGEF1-201ENST00000372189 ACANP16112 2415 aa8.88□□□□□ -0.99
RAPGEF1-201ENST00000372189 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
RAPGEF1-201ENST00000372189 F8P00451 2351 aa8.87□□□□□ -0.99
RAPGEF1-201ENST00000372189 Q75L30 129 aa8.87□□□□□ -0.99
RAPGEF1-201ENST00000372189 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
RAPGEF1-201ENST00000372189 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
RAPGEF1-201ENST00000372189 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
RAPGEF1-201ENST00000372189 A8MWP4 228 aa8.83□□□□□ -1
RAPGEF1-201ENST00000372189 J3QL48 77 aa8.82□□□□□ -1
RAPGEF1-201ENST00000372189 K7EQZ3 153 aa8.81□□□□□ -1
RAPGEF1-201ENST00000372189 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
RAPGEF1-201ENST00000372189 FAM168BA1KXE4 195 aa8.78□□□□□ -1
RAPGEF1-201ENST00000372189 LINC00612Q8N6U2 182 aa8.78□□□□□ -1
RAPGEF1-201ENST00000372189 SPINK7P58062 85 aa8.77□□□□□ -1.01
RAPGEF1-201ENST00000372189 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
RAPGEF1-201ENST00000372189 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
RAPGEF1-201ENST00000372189 A0A087WTM6 91 aa8.75□□□□□ -1.01
RAPGEF1-201ENST00000372189 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
RAPGEF1-201ENST00000372189 IGLV1-50A0A075B6I6 118 aa8.74□□□□□ -1.01
RAPGEF1-201ENST00000372189 PRR34Q9NV39 138 aa8.74□□□□□ -1.01
RAPGEF1-201ENST00000372189 MUC4Q99102 2169 aa8.74□□□□□ -1.01
RAPGEF1-201ENST00000372189 HECTD1Q9ULT8 2610 aa8.73□□□□□ -1.01
RAPGEF1-201ENST00000372189 C15orf56Q8N910 161 aa8.72□□□□□ -1.01
RAPGEF1-201ENST00000372189 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
RAPGEF1-201ENST00000372189 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
RAPGEF1-201ENST00000372189 A0A0D9SG42 100 aa8.69□□□□□ -1.02
RAPGEF1-201ENST00000372189 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
RAPGEF1-201ENST00000372189 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
RAPGEF1-201ENST00000372189 Q8N377 158 aa8.66□□□□□ -1.02
RAPGEF1-201ENST00000372189 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
RAPGEF1-201ENST00000372189 Q96NJ1 140 aa8.65□□□□□ -1.02
RAPGEF1-201ENST00000372189 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
RAPGEF1-201ENST00000372189 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
RAPGEF1-201ENST00000372189 FLNBO75369 2602 aaKnown RBP8.65□□□□□ -1.02
RAPGEF1-201ENST00000372189 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
RAPGEF1-201ENST00000372189 CHD7Q9P2D1 2997 aa8.64□□□□□ -1.03
RAPGEF1-201ENST00000372189 ZNF861PO60384 105 aa8.63□□□□□ -1.03
RAPGEF1-201ENST00000372189 FP248Q71RG6 208 aaPredicted RBP8.63□□□□□ -1.03
RAPGEF1-201ENST00000372189 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
RAPGEF1-201ENST00000372189 CEP350Q5VT06 3117 aa8.62□□□□□ -1.03
RAPGEF1-201ENST00000372189 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
RAPGEF1-201ENST00000372189 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
RAPGEF1-201ENST00000372189 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
RAPGEF1-201ENST00000372189 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
RAPGEF1-201ENST00000372189 Q5VV11 94 aa8.58□□□□□ -1.04
RAPGEF1-201ENST00000372189 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
RAPGEF1-201ENST00000372189 FAM229BQ4G0N7 80 aa8.57□□□□□ -1.04
RAPGEF1-201ENST00000372189 DSCR10P59022 87 aa8.56□□□□□ -1.04
RAPGEF1-201ENST00000372189 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
RAPGEF1-201ENST00000372189 CHD9Q3L8U1 2897 aa8.55□□□□□ -1.04
RAPGEF1-201ENST00000372189 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
RAPGEF1-201ENST00000372189 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
RAPGEF1-201ENST00000372189 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
RAPGEF1-201ENST00000372189 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
RAPGEF1-201ENST00000372189 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
RAPGEF1-201ENST00000372189 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
RAPGEF1-201ENST00000372189 A0A1B0GU33 70 aa8.52□□□□□ -1.05
RAPGEF1-201ENST00000372189 HTTP42858 3142 aa8.52□□□□□ -1.05
RAPGEF1-201ENST00000372189 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
RAPGEF1-201ENST00000372189 HELZ2Q9BYK8 2649 aaKnown RBP8.5□□□□□ -1.05
RAPGEF1-201ENST00000372189 TNP2Q05952 138 aa8.5□□□□□ -1.05
RAPGEF1-201ENST00000372189 CR1P17927 2039 aa8.49□□□□□ -1.05
RAPGEF1-201ENST00000372189 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
RAPGEF1-201ENST00000372189 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
RAPGEF1-201ENST00000372189 PRRC2CQ9Y520 2896 aaKnown RBP8.48□□□□□ -1.05
RAPGEF1-201ENST00000372189 FLNAP21333 2647 aaKnown RBP8.47□□□□□ -1.05
RAPGEF1-201ENST00000372189 C9orf92A6NGG3 77 aa8.46□□□□□ -1.05
RAPGEF1-201ENST00000372189 PCNTO95613 3336 aa8.46□□□□□ -1.05
RAPGEF1-201ENST00000372189 ROMO1P60602 79 aa8.45□□□□□ -1.06
RAPGEF1-201ENST00000372189 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
RAPGEF1-201ENST00000372189 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
RAPGEF1-201ENST00000372189 MGAM2Q2M2H8 2515 aa8.39□□□□□ -1.07
RAPGEF1-201ENST00000372189 TRANK1O15050 2925 aa8.37□□□□□ -1.07
RAPGEF1-201ENST00000372189 RANBP2P49792 3224 aaKnown RBP8.36□□□□□ -1.07
RAPGEF1-201ENST00000372189 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
RAPGEF1-201ENST00000372189 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms