RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
GPC4-201ENST00000370828 Q6ZRP5 223 aa8.49□□□□□ -1.05
GPC4-201ENST00000370828 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
GPC4-201ENST00000370828 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
GPC4-201ENST00000370828 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
GPC4-201ENST00000370828 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
GPC4-201ENST00000370828 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
GPC4-201ENST00000370828 A0A0A0MQY5 61 aa8.46□□□□□ -1.05
GPC4-201ENST00000370828 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
GPC4-201ENST00000370828 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
GPC4-201ENST00000370828 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
GPC4-201ENST00000370828 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
GPC4-201ENST00000370828 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
GPC4-201ENST00000370828 ANKRD17O75179 2603 aaKnown RBP8.44□□□□□ -1.06
GPC4-201ENST00000370828 Q8N377 158 aa8.44□□□□□ -1.06
GPC4-201ENST00000370828 PRR26Q8N8Z3 221 aa8.43□□□□□ -1.06
GPC4-201ENST00000370828 CHD7Q9P2D1 2997 aa8.43□□□□□ -1.06
GPC4-201ENST00000370828 FAM168BA1KXE4 195 aa8.43□□□□□ -1.06
GPC4-201ENST00000370828 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
GPC4-201ENST00000370828 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
GPC4-201ENST00000370828 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
GPC4-201ENST00000370828 A8MWP4 228 aa8.41□□□□□ -1.06
GPC4-201ENST00000370828 HTTP42858 3142 aa8.41□□□□□ -1.06
GPC4-201ENST00000370828 Q5VV11 94 aa8.41□□□□□ -1.06
GPC4-201ENST00000370828 MOBPQ13875 183 aa8.41□□□□□ -1.06
GPC4-201ENST00000370828 OCR1Q9BZK8 76 aa8.41□□□□□ -1.06
GPC4-201ENST00000370828 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
GPC4-201ENST00000370828 EPG5Q9HCE0 2579 aa8.38□□□□□ -1.07
GPC4-201ENST00000370828 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
GPC4-201ENST00000370828 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
GPC4-201ENST00000370828 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
GPC4-201ENST00000370828 A0A096LNT2 108 aa8.37□□□□□ -1.07
GPC4-201ENST00000370828 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
GPC4-201ENST00000370828 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
GPC4-201ENST00000370828 LUZP6Q538Z0 58 aa8.36□□□□□ -1.07
GPC4-201ENST00000370828 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
GPC4-201ENST00000370828 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
GPC4-201ENST00000370828 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
GPC4-201ENST00000370828 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
GPC4-201ENST00000370828 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
GPC4-201ENST00000370828 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
GPC4-201ENST00000370828 Q8NAQ8 132 aa8.33□□□□□ -1.08
GPC4-201ENST00000370828 USP24Q9UPU5 2620 aa8.32□□□□□ -1.08
GPC4-201ENST00000370828 FLNBO75369 2602 aaKnown RBP8.32□□□□□ -1.08
GPC4-201ENST00000370828 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
GPC4-201ENST00000370828 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
GPC4-201ENST00000370828 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
GPC4-201ENST00000370828 FREM2Q5SZK8 3169 aa8.3□□□□□ -1.08
GPC4-201ENST00000370828 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
GPC4-201ENST00000370828 H3BNG1 76 aa8.28□□□□□ -1.08
GPC4-201ENST00000370828 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
GPC4-201ENST00000370828 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
GPC4-201ENST00000370828 PRUNE2Q8WUY3 3088 aa8.26□□□□□ -1.09
GPC4-201ENST00000370828 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
GPC4-201ENST00000370828 LY6G6CO95867 125 aa8.24□□□□□ -1.09
GPC4-201ENST00000370828 XIRP2A4UGR9 3374 aa8.24□□□□□ -1.09
GPC4-201ENST00000370828 IGLV5-48A0A075B6I7 105 aa8.24□□□□□ -1.09
GPC4-201ENST00000370828 DSCR10P59022 87 aa8.24□□□□□ -1.09
GPC4-201ENST00000370828 CR1P17927 2039 aa8.23□□□□□ -1.09
GPC4-201ENST00000370828 C19orf73Q9NVV2 129 aa8.22□□□□□ -1.09
GPC4-201ENST00000370828 Q8NDZ9 215 aa8.2□□□□□ -1.1
GPC4-201ENST00000370828 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
GPC4-201ENST00000370828 A6NN06 94 aa8.19□□□□□ -1.1
GPC4-201ENST00000370828 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
GPC4-201ENST00000370828 AKAP13Q12802 2813 aa8.19□□□□□ -1.1
GPC4-201ENST00000370828 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
GPC4-201ENST00000370828 CDH23Q9H251 3354 aa8.18□□□□□ -1.1
GPC4-201ENST00000370828 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
GPC4-201ENST00000370828 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
GPC4-201ENST00000370828 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
GPC4-201ENST00000370828 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
GPC4-201ENST00000370828 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
GPC4-201ENST00000370828 TRIOO75962 3097 aa8.16□□□□□ -1.1
GPC4-201ENST00000370828 NUPR2A6NF83 97 aa8.16□□□□□ -1.1
GPC4-201ENST00000370828 SPINK7P58062 85 aa8.15□□□□□ -1.1
GPC4-201ENST00000370828 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
GPC4-201ENST00000370828 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
GPC4-201ENST00000370828 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
GPC4-201ENST00000370828 NBEAQ8NFP9 2946 aa8.12□□□□□ -1.11
GPC4-201ENST00000370828 TLX1NBP0CAT3 122 aa8.11□□□□□ -1.11
GPC4-201ENST00000370828 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
GPC4-201ENST00000370828 VPS13AQ96RL7 3174 aa8.11□□□□□ -1.11
GPC4-201ENST00000370828 CENPEQ02224 2701 aa8.11□□□□□ -1.11
GPC4-201ENST00000370828 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
GPC4-201ENST00000370828 Q96NJ1 140 aa8.1□□□□□ -1.11
GPC4-201ENST00000370828 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
GPC4-201ENST00000370828 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
GPC4-201ENST00000370828 CHD6Q8TD26 2715 aa8.08□□□□□ -1.12
GPC4-201ENST00000370828 APLNQ9ULZ1 77 aa8.08□□□□□ -1.12
GPC4-201ENST00000370828 WDFY4Q6ZS81 3184 aa8.07□□□□□ -1.12
GPC4-201ENST00000370828 MGAQ8IWI9 3026 aa8.06□□□□□ -1.12
GPC4-201ENST00000370828 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
GPC4-201ENST00000370828 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
GPC4-201ENST00000370828 FRYQ5TBA9 3013 aa8.05□□□□□ -1.12
GPC4-201ENST00000370828 VCANP13611 3396 aa8.03□□□□□ -1.12
GPC4-201ENST00000370828 TRANK1O15050 2925 aa8.03□□□□□ -1.12
GPC4-201ENST00000370828 RTL8CO15255 209 aa8.03□□□□□ -1.12
GPC4-201ENST00000370828 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
GPC4-201ENST00000370828 NBDYA0A0U1RRE5 68 aa8.02□□□□□ -1.13
GPC4-201ENST00000370828 ATRQ13535 2644 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms