RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PLA2G2DQ9UNK4 145 aa12.87□□□□□ -0.35
LMO4-202ENST00000370544 ATP11AUNQ6ZP68 121 aa12.86□□□□□ -0.35
LMO4-202ENST00000370544 Q8N377 158 aa12.85□□□□□ -0.35
LMO4-202ENST00000370544 ZNF861PO60384 105 aa12.85□□□□□ -0.35
LMO4-202ENST00000370544 C9orf163Q8N9P6 203 aa12.83□□□□□ -0.35
LMO4-202ENST00000370544 PRO0628Q9UI54 55 aa12.83□□□□□ -0.36
LMO4-202ENST00000370544 C4orf26Q17RF5 130 aa12.83□□□□□ -0.36
LMO4-202ENST00000370544 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
LMO4-202ENST00000370544 DSCR10P59022 87 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 PRR15Q8IV56 129 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 CASC10Q5T4H9 136 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 C8orf17Q9NRJ1 99 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 SSBP3-AS1Q7Z2R9 100 aa12.78□□□□□ -0.36
LMO4-202ENST00000370544 LINC00304Q8N9R0 145 aa12.76□□□□□ -0.37
LMO4-202ENST00000370544 A0A0G2JQZ4 141 aa12.76□□□□□ -0.37
LMO4-202ENST00000370544 A0A1W2PNN7 141 aa12.76□□□□□ -0.37
LMO4-202ENST00000370544 J3QL48 77 aa12.74□□□□□ -0.37
LMO4-202ENST00000370544 IGLV8-61A0A075B6I0 122 aa12.73□□□□□ -0.37
LMO4-202ENST00000370544 A0A1B0GVX0 72 aa12.73□□□□□ -0.37
LMO4-202ENST00000370544 CNBPP62633 177 aaKnown RBP12.73□□□□□ -0.37
LMO4-202ENST00000370544 UTRNP46939 3433 aa12.72□□□□□ -0.37
LMO4-202ENST00000370544 COA5Q86WW8 74 aa12.71□□□□□ -0.37
LMO4-202ENST00000370544 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
LMO4-202ENST00000370544 HECTD1Q9ULT8 2610 aa12.7□□□□□ -0.38
LMO4-202ENST00000370544 ANAPC11Q9NYG5 84 aa12.7□□□□□ -0.38
LMO4-202ENST00000370544 IGLV7-43P04211 117 aa12.7□□□□□ -0.38
LMO4-202ENST00000370544 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
LMO4-202ENST00000370544 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
LMO4-202ENST00000370544 OBSCN-AS1Q96MR7 158 aa12.68□□□□□ -0.38
LMO4-202ENST00000370544 SMR3BP02814 79 aaPredicted RBP12.67□□□□□ -0.38
LMO4-202ENST00000370544 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
LMO4-202ENST00000370544 C9orf92A6NGG3 77 aa12.64□□□□□ -0.39
LMO4-202ENST00000370544 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
LMO4-202ENST00000370544 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
LMO4-202ENST00000370544 CEP350Q5VT06 3117 aa12.62□□□□□ -0.39
LMO4-202ENST00000370544 LINC00336Q6ZUF6 198 aa12.61□□□□□ -0.39
LMO4-202ENST00000370544 IGLV5-37A0A075B6J1 123 aa12.6□□□□□ -0.39
LMO4-202ENST00000370544 A0A1W2PNM2 257 aa12.6□□□□□ -0.39
LMO4-202ENST00000370544 LINC01600Q96MT4 127 aa12.59□□□□□ -0.39
LMO4-202ENST00000370544 A8MUN3 132 aa12.58□□□□□ -0.4
LMO4-202ENST00000370544 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
LMO4-202ENST00000370544 COX6B2Q6YFQ2 88 aa12.52□□□□□ -0.4
LMO4-202ENST00000370544 CHD7Q9P2D1 2997 aa12.52□□□□□ -0.41
LMO4-202ENST00000370544 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
LMO4-202ENST00000370544 UQCR11O14957 56 aa12.5□□□□□ -0.41
LMO4-202ENST00000370544 FAM104AQ969W3 186 aa12.49□□□□□ -0.41
LMO4-202ENST00000370544 H7BZZ5 65 aa12.48□□□□□ -0.41
LMO4-202ENST00000370544 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.41
LMO4-202ENST00000370544 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
LMO4-202ENST00000370544 WIPF1O43516 503 aa12.44□□□□□ -0.42
LMO4-202ENST00000370544 TNP2Q05952 138 aa12.44□□□□□ -0.42
LMO4-202ENST00000370544 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
LMO4-202ENST00000370544 USP24Q9UPU5 2620 aa12.43□□□□□ -0.42
LMO4-202ENST00000370544 MIR22HGQ0VDD5 57 aa12.39□□□□□ -0.43
LMO4-202ENST00000370544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.38□□□□□ -0.43
LMO4-202ENST00000370544 ITPR3Q14573 2671 aa12.36□□□□□ -0.43
LMO4-202ENST00000370544 SPANXA2-OT1Q8N9U9 137 aa12.34□□□□□ -0.43
LMO4-202ENST00000370544 CHD9Q3L8U1 2897 aa12.34□□□□□ -0.43
LMO4-202ENST00000370544 CD164Q04900 197 aa12.33□□□□□ -0.44
LMO4-202ENST00000370544 BPTFQ12830 3046 aa12.33□□□□□ -0.44
LMO4-202ENST00000370544 RBM12B-AS1Q9P1G2 102 aa12.33□□□□□ -0.44
LMO4-202ENST00000370544 SPINT4Q6UDR6 99 aa12.31□□□□□ -0.44
LMO4-202ENST00000370544 Q8N1X5 172 aa12.31□□□□□ -0.44
LMO4-202ENST00000370544 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
LMO4-202ENST00000370544 CR1P17927 2039 aa12.27□□□□□ -0.45
LMO4-202ENST00000370544 OCR1Q9BZK8 76 aa12.26□□□□□ -0.45
LMO4-202ENST00000370544 ATRQ13535 2644 aa12.23□□□□□ -0.45
LMO4-202ENST00000370544 HTTP42858 3142 aa12.23□□□□□ -0.45
LMO4-202ENST00000370544 PRR26Q8N8Z3 221 aa12.22□□□□□ -0.45
LMO4-202ENST00000370544 Q8NDZ9 215 aa12.21□□□□□ -0.45
LMO4-202ENST00000370544 CRIPTQ9P021 101 aa12.2□□□□□ -0.46
LMO4-202ENST00000370544 PCNTO95613 3336 aa12.2□□□□□ -0.46
LMO4-202ENST00000370544 PLAC8Q9NZF1 115 aa12.2□□□□□ -0.46
LMO4-202ENST00000370544 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
LMO4-202ENST00000370544 SPRR1AP35321 89 aa12.16□□□□□ -0.46
LMO4-202ENST00000370544 CFAP46Q8IYW2 2715 aa12.15□□□□□ -0.46
LMO4-202ENST00000370544 MAST4O15021 2626 aa12.15□□□□□ -0.46
LMO4-202ENST00000370544 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
LMO4-202ENST00000370544 A0A0D9SG42 100 aa12.12□□□□□ -0.47
LMO4-202ENST00000370544 LINC01554Q52M75 96 aa12.11□□□□□ -0.47
LMO4-202ENST00000370544 Q6ZSA8 131 aa12.1□□□□□ -0.47
LMO4-202ENST00000370544 MMP24-AS1A0A0U1RRL7 71 aa12.07□□□□□ -0.48
LMO4-202ENST00000370544 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
LMO4-202ENST00000370544 HRES1P13985 223 aa12.06□□□□□ -0.48
LMO4-202ENST00000370544 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
LMO4-202ENST00000370544 TRANK1O15050 2925 aa12.05□□□□□ -0.48
LMO4-202ENST00000370544 CDC42SE1Q9NRR8 79 aa12.05□□□□□ -0.48
LMO4-202ENST00000370544 SPRR1BP22528 89 aa12.02□□□□□ -0.49
LMO4-202ENST00000370544 CENPEQ02224 2701 aa12.01□□□□□ -0.49
LMO4-202ENST00000370544 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
LMO4-202ENST00000370544 Q1T7F1 81 aa12.01□□□□□ -0.49
LMO4-202ENST00000370544 KTN1-AS1Q86SY8 53 aa12□□□□□ -0.49
LMO4-202ENST00000370544 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
LMO4-202ENST00000370544 ZNF292O60281 2723 aa11.96□□□□□ -0.49
LMO4-202ENST00000370544 LINC00472Q9H8W2 130 aa11.94□□□□□ -0.5
LMO4-202ENST00000370544 MGAQ8IWI9 3026 aa11.93□□□□□ -0.5
LMO4-202ENST00000370544 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
LMO4-202ENST00000370544 LCA10Q71F78 164 aa11.9□□□□□ -0.5
LMO4-202ENST00000370544 LAMA3Q16787 3333 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms