RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
COL9A1-204ENST00000370496 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
COL9A1-204ENST00000370496 IGLV6-57P01721 117 aa8.96□□□□□ -0.98
COL9A1-204ENST00000370496 COX8AP10176 69 aa8.96□□□□□ -0.98
COL9A1-204ENST00000370496 OR13C6PQ8NH95 151 aa8.96□□□□□ -0.98
COL9A1-204ENST00000370496 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
COL9A1-204ENST00000370496 CBY1Q9Y3M2 126 aa8.95□□□□□ -0.98
COL9A1-204ENST00000370496 MUSTN1Q8IVN3 82 aa8.94□□□□□ -0.98
COL9A1-204ENST00000370496 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
COL9A1-204ENST00000370496 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
COL9A1-204ENST00000370496 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
COL9A1-204ENST00000370496 SPRR1AP35321 89 aa8.93□□□□□ -0.98
COL9A1-204ENST00000370496 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
COL9A1-204ENST00000370496 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
COL9A1-204ENST00000370496 C14orf144Q96I85 54 aa8.92□□□□□ -0.98
COL9A1-204ENST00000370496 DLEU1O43261 78 aa8.91□□□□□ -0.98
COL9A1-204ENST00000370496 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
COL9A1-204ENST00000370496 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
COL9A1-204ENST00000370496 ZNF73O43830 326 aaPredicted RBP8.9□□□□□ -0.98
COL9A1-204ENST00000370496 SLC25A34Q6PIV7 304 aa8.9□□□□□ -0.98
COL9A1-204ENST00000370496 HIST1H4GQ99525 98 aa8.9□□□□□ -0.98
COL9A1-204ENST00000370496 PRR26Q8N8Z3 221 aa8.89□□□□□ -0.99
COL9A1-204ENST00000370496 A6NDN8 102 aa8.88□□□□□ -0.99
COL9A1-204ENST00000370496 B5MCH6 92 aa8.88□□□□□ -0.99
COL9A1-204ENST00000370496 RPL13AP40429 203 aaKnown RBP8.87□□□□□ -0.99
COL9A1-204ENST00000370496 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
COL9A1-204ENST00000370496 Q6ZRX8 168 aa8.87□□□□□ -0.99
COL9A1-204ENST00000370496 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
COL9A1-204ENST00000370496 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
COL9A1-204ENST00000370496 A4D1N5 150 aa8.86□□□□□ -0.99
COL9A1-204ENST00000370496 SMCR5Q8TEV8 140 aa8.86□□□□□ -0.99
COL9A1-204ENST00000370496 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
COL9A1-204ENST00000370496 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
COL9A1-204ENST00000370496 TNXBP22105 4242 aa8.84□□□□□ -0.99
COL9A1-204ENST00000370496 CRYGAP11844 174 aa8.84□□□□□ -0.99
COL9A1-204ENST00000370496 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
COL9A1-204ENST00000370496 C6orf99Q4VX62 202 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 C2orf91Q6ZV80 131 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 SPRR4Q96PI1 79 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 C12orf57Q99622 126 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 Q9BRP9 147 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 HERC1Q15751 4861 aa8.83□□□□□ -1
COL9A1-204ENST00000370496 A0A087X002 238 aa8.82□□□□□ -1
COL9A1-204ENST00000370496 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
COL9A1-204ENST00000370496 COX7BP24311 80 aa8.81□□□□□ -1
COL9A1-204ENST00000370496 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
COL9A1-204ENST00000370496 ERC2-IT1O76042 136 aa8.79□□□□□ -1
COL9A1-204ENST00000370496 TYMSOSQ8TAI1 123 aa8.79□□□□□ -1
COL9A1-204ENST00000370496 TAL2Q16559 108 aa8.78□□□□□ -1
COL9A1-204ENST00000370496 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
COL9A1-204ENST00000370496 DHRS4-AS1Q9P1J3 65 aa8.78□□□□□ -1
COL9A1-204ENST00000370496 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
COL9A1-204ENST00000370496 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
COL9A1-204ENST00000370496 GAGE2AQ6NT46 116 aa8.77□□□□□ -1.01
COL9A1-204ENST00000370496 UQCR10Q9UDW1 63 aa8.77□□□□□ -1.01
COL9A1-204ENST00000370496 TMEM238LA0A1B0GVL6 79 aa8.76□□□□□ -1.01
COL9A1-204ENST00000370496 A6NJY4 79 aa8.76□□□□□ -1.01
COL9A1-204ENST00000370496 CEND1Q8N111 149 aa8.76□□□□□ -1.01
COL9A1-204ENST00000370496 RAB37Q96AX2 223 aa8.76□□□□□ -1.01
COL9A1-204ENST00000370496 SMIM6P0DI80 62 aa8.75□□□□□ -1.01
COL9A1-204ENST00000370496 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
COL9A1-204ENST00000370496 HSD52Q0P140 79 aa8.74□□□□□ -1.01
COL9A1-204ENST00000370496 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
COL9A1-204ENST00000370496 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
COL9A1-204ENST00000370496 H7C2G1 150 aa8.73□□□□□ -1.01
COL9A1-204ENST00000370496 VAMP3Q15836 100 aa8.73□□□□□ -1.01
COL9A1-204ENST00000370496 C3orf22Q8N5N4 141 aa8.73□□□□□ -1.01
COL9A1-204ENST00000370496 ST20-AS1Q8NBB2 130 aa8.73□□□□□ -1.01
COL9A1-204ENST00000370496 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
COL9A1-204ENST00000370496 CFC1P0CG37 223 aa8.72□□□□□ -1.01
COL9A1-204ENST00000370496 FXYD2P54710 66 aa8.72□□□□□ -1.01
COL9A1-204ENST00000370496 NHP2Q9NX24 153 aaKnown RBP8.72□□□□□ -1.01
COL9A1-204ENST00000370496 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
COL9A1-204ENST00000370496 Q1RN00 199 aa8.7□□□□□ -1.02
COL9A1-204ENST00000370496 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
COL9A1-204ENST00000370496 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
COL9A1-204ENST00000370496 SLC25A20O43772 301 aa8.69□□□□□ -1.02
COL9A1-204ENST00000370496 MOBPQ13875 183 aa8.68□□□□□ -1.02
COL9A1-204ENST00000370496 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
COL9A1-204ENST00000370496 XP32Q5T750 250 aa8.67□□□□□ -1.02
COL9A1-204ENST00000370496 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
COL9A1-204ENST00000370496 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
COL9A1-204ENST00000370496 TSPAN13O95857 204 aa8.66□□□□□ -1.02
COL9A1-204ENST00000370496 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
COL9A1-204ENST00000370496 PRO1854Q9UHT4 67 aa8.66□□□□□ -1.02
COL9A1-204ENST00000370496 Q8NBF4 154 aa8.65□□□□□ -1.02
COL9A1-204ENST00000370496 SPRR1BP22528 89 aa8.64□□□□□ -1.03
COL9A1-204ENST00000370496 LINC00575Q6W349 94 aa8.64□□□□□ -1.03
COL9A1-204ENST00000370496 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
COL9A1-204ENST00000370496 K7ERJ3 54 aa8.63□□□□□ -1.03
COL9A1-204ENST00000370496 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
COL9A1-204ENST00000370496 hADV29S1A0JD25 119 aa8.62□□□□□ -1.03
COL9A1-204ENST00000370496 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
COL9A1-204ENST00000370496 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
COL9A1-204ENST00000370496 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
COL9A1-204ENST00000370496 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
COL9A1-204ENST00000370496 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
COL9A1-204ENST00000370496 Q6ZQY7 126 aa8.61□□□□□ -1.03
COL9A1-204ENST00000370496 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
COL9A1-204ENST00000370496 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms