RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PRYO14603 147 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 NCR3O14931 201 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 NDUFC2O95298 119 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 CRYGAP11844 174 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 AKR1D1P51857 326 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 S100A12P80511 92 aa5.85□□□□□ -1.47
CD48-202ENST00000368046 TRBV10-3A0A0K0K1G6 114 aa5.84□□□□□ -1.47
CD48-202ENST00000368046 TIMM17BO60830 172 aa5.84□□□□□ -1.47
CD48-202ENST00000368046 SPRR1AP35321 89 aa5.84□□□□□ -1.47
CD48-202ENST00000368046 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
CD48-202ENST00000368046 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
CD48-202ENST00000368046 A0A087X002 238 aa5.83□□□□□ -1.48
CD48-202ENST00000368046 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
CD48-202ENST00000368046 DDTP30046 118 aa5.83□□□□□ -1.48
CD48-202ENST00000368046 SOSTDC1Q6X4U4 206 aa5.83□□□□□ -1.48
CD48-202ENST00000368046 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
CD48-202ENST00000368046 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
CD48-202ENST00000368046 S100A6P06703 90 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 S100A2P29034 98 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 NPC2P61916 151 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 FAM229BQ4G0N7 80 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 S100A7L2Q5SY68 101 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 HIST3H2BBQ8N257 126 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 TYMSOSQ8TAI1 123 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 LINC00308Q8TCZ7 52 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 LITAFQ99732 161 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
CD48-202ENST00000368046 IGLV6-57P01721 117 aa5.81□□□□□ -1.48
CD48-202ENST00000368046 SNRPEP62304 92 aaKnown RBP5.81□□□□□ -1.48
CD48-202ENST00000368046 HIST1H2BLQ99880 126 aa5.81□□□□□ -1.48
CD48-202ENST00000368046 TTTY13Q9BZ97 58 aa5.81□□□□□ -1.48
CD48-202ENST00000368046 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
CD48-202ENST00000368046 SMCR5Q8TEV8 140 aa5.8□□□□□ -1.48
CD48-202ENST00000368046 SPANXCQ9NY87 97 aa5.8□□□□□ -1.48
CD48-202ENST00000368046 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
CD48-202ENST00000368046 B5MCH6 92 aa5.79□□□□□ -1.48
CD48-202ENST00000368046 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
CD48-202ENST00000368046 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
CD48-202ENST00000368046 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
CD48-202ENST00000368046 ZNF706Q9Y5V0 76 aaPredicted RBP5.79□□□□□ -1.48
CD48-202ENST00000368046 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
CD48-202ENST00000368046 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
CD48-202ENST00000368046 TRAV23DV6A0A075B6W5 121 aa5.77□□□□□ -1.49
CD48-202ENST00000368046 HINT1P49773 126 aaPredicted RBP5.77□□□□□ -1.49
CD48-202ENST00000368046 Q6ZVH6 145 aa5.77□□□□□ -1.49
CD48-202ENST00000368046 PCP2Q8IVA1 136 aa5.77□□□□□ -1.49
CD48-202ENST00000368046 OR13C6PQ8NH95 151 aa5.77□□□□□ -1.49
CD48-202ENST00000368046 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
CD48-202ENST00000368046 C5orf52A6NGY3 159 aa5.76□□□□□ -1.49
CD48-202ENST00000368046 ZNF73O43830 326 aaPredicted RBP5.76□□□□□ -1.49
CD48-202ENST00000368046 TSPAN13O95857 204 aa5.76□□□□□ -1.49
CD48-202ENST00000368046 IFITM1P13164 125 aa5.76□□□□□ -1.49
CD48-202ENST00000368046 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
CD48-202ENST00000368046 COPS9Q8WXC6 57 aa5.76□□□□□ -1.49
CD48-202ENST00000368046 PPDPFQ9H3Y8 114 aa5.76□□□□□ -1.49
CD48-202ENST00000368046 HSBP1L1C9JCN9 74 aa5.75□□□□□ -1.49
CD48-202ENST00000368046 CTAG1AP78358 180 aa5.75□□□□□ -1.49
CD48-202ENST00000368046 Q6ZRX8 168 aa5.75□□□□□ -1.49
CD48-202ENST00000368046 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
CD48-202ENST00000368046 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
CD48-202ENST00000368046 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
CD48-202ENST00000368046 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
CD48-202ENST00000368046 Q9BRP9 147 aa5.74□□□□□ -1.49
CD48-202ENST00000368046 SCGB1D1O95968 90 aa5.73□□□□□ -1.49
CD48-202ENST00000368046 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
CD48-202ENST00000368046 GAGE2AQ6NT46 116 aa5.73□□□□□ -1.49
CD48-202ENST00000368046 LRP2P98164 4655 aa5.73□□□□□ -1.49
CD48-202ENST00000368046 PRR4Q16378 134 aa5.72□□□□□ -1.49
CD48-202ENST00000368046 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
CD48-202ENST00000368046 A6NDN8 102 aa5.7□□□□□ -1.5
CD48-202ENST00000368046 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
CD48-202ENST00000368046 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
CD48-202ENST00000368046 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
CD48-202ENST00000368046 COX7BP24311 80 aa5.69□□□□□ -1.5
CD48-202ENST00000368046 C6orf99Q4VX62 202 aa5.69□□□□□ -1.5
CD48-202ENST00000368046 LPAP08519 4548 aa5.68□□□□□ -1.5
CD48-202ENST00000368046 TRAV13-2A0A0B4J235 113 aa5.68□□□□□ -1.5
CD48-202ENST00000368046 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
CD48-202ENST00000368046 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
CD48-202ENST00000368046 ST20-AS1Q8NBB2 130 aa5.67□□□□□ -1.5
CD48-202ENST00000368046 Q8NBF4 154 aa5.67□□□□□ -1.5
CD48-202ENST00000368046 DLEU1O43261 78 aa5.66□□□□□ -1.5
CD48-202ENST00000368046 SPINK1P00995 79 aa5.66□□□□□ -1.5
CD48-202ENST00000368046 COX8AP10176 69 aa5.66□□□□□ -1.5
CD48-202ENST00000368046 SPRR1BP22528 89 aa5.66□□□□□ -1.5
CD48-202ENST00000368046 A0A1B0GWB2 263 aa5.65□□□□□ -1.5
CD48-202ENST00000368046 A4D1N5 150 aa5.65□□□□□ -1.5
CD48-202ENST00000368046 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
CD48-202ENST00000368046 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
CD48-202ENST00000368046 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
CD48-202ENST00000368046 MOBPQ13875 183 aa5.64□□□□□ -1.51
CD48-202ENST00000368046 TAL2Q16559 108 aa5.64□□□□□ -1.51
CD48-202ENST00000368046 SMIM11BQ8TCY0 68 aa5.64□□□□□ -1.51
CD48-202ENST00000368046 HIST1H4GQ99525 98 aa5.64□□□□□ -1.51
CD48-202ENST00000368046 VAMP3Q15836 100 aa5.63□□□□□ -1.51
CD48-202ENST00000368046 C14orf144Q96I85 54 aa5.63□□□□□ -1.51
CD48-202ENST00000368046 LAMTOR3Q9UHA4 124 aa5.63□□□□□ -1.51
CD48-202ENST00000368046 TEX49A0A1B0GTD5 131 aa5.62□□□□□ -1.51
CD48-202ENST00000368046 SPATA45Q537H7 98 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms