RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 LY6G6CO95867 125 aa6.19□□□□□ -1.42
SYNE1-209ENST00000367257 Q6ZSN1 163 aa6.19□□□□□ -1.42
SYNE1-209ENST00000367257 SPTBN4Q9H254 2564 aa6.18□□□□□ -1.42
SYNE1-209ENST00000367257 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
SYNE1-209ENST00000367257 PLA2G2AP14555 144 aa6.18□□□□□ -1.42
SYNE1-209ENST00000367257 MGAQ8IWI9 3026 aa6.18□□□□□ -1.42
SYNE1-209ENST00000367257 MTORP42345 2549 aa6.18□□□□□ -1.42
SYNE1-209ENST00000367257 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
SYNE1-209ENST00000367257 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
SYNE1-209ENST00000367257 ANKRD11Q6UB99 2663 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-209ENST00000367257 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
SYNE1-209ENST00000367257 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
SYNE1-209ENST00000367257 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
SYNE1-209ENST00000367257 PKD1L2Q7Z442 2459 aa6.16□□□□□ -1.42
SYNE1-209ENST00000367257 Q6ZRX8 168 aa6.16□□□□□ -1.42
SYNE1-209ENST00000367257 FASNP49327 2511 aaKnown RBP6.15□□□□□ -1.43
SYNE1-209ENST00000367257 M0R2N4 97 aa6.15□□□□□ -1.43
SYNE1-209ENST00000367257 USP9XQ93008 2570 aaPredicted RBP6.15□□□□□ -1.43
SYNE1-209ENST00000367257 C6orf48Q9UBA6 75 aa6.14□□□□□ -1.43
SYNE1-209ENST00000367257 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
SYNE1-209ENST00000367257 NBPF19A0A087WUL8 3843 aa6.13□□□□□ -1.43
SYNE1-209ENST00000367257 Q1T7F1 81 aa6.13□□□□□ -1.43
SYNE1-209ENST00000367257 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
SYNE1-209ENST00000367257 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
SYNE1-209ENST00000367257 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
SYNE1-209ENST00000367257 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
SYNE1-209ENST00000367257 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
SYNE1-209ENST00000367257 KMT2BQ9UMN6 2715 aaPredicted RBP6.11□□□□□ -1.43
SYNE1-209ENST00000367257 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
SYNE1-209ENST00000367257 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
SYNE1-209ENST00000367257 COA5Q86WW8 74 aa6.1□□□□□ -1.43
SYNE1-209ENST00000367257 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-209ENST00000367257 LITAFQ99732 161 aa6.1□□□□□ -1.43
SYNE1-209ENST00000367257 DSPP15924 2871 aaKnown RBP6.1□□□□□ -1.43
SYNE1-209ENST00000367257 Q6ZRP5 223 aa6.1□□□□□ -1.43
SYNE1-209ENST00000367257 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
SYNE1-209ENST00000367257 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
SYNE1-209ENST00000367257 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SYNE1-209ENST00000367257 PRLHP81277 87 aa6.09□□□□□ -1.43
SYNE1-209ENST00000367257 A8MWP4 228 aa6.09□□□□□ -1.43
SYNE1-209ENST00000367257 A8MTW9 85 aa6.09□□□□□ -1.43
SYNE1-209ENST00000367257 LINC00476Q8WZB0 136 aa6.09□□□□□ -1.43
SYNE1-209ENST00000367257 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.43
SYNE1-209ENST00000367257 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
SYNE1-209ENST00000367257 USP9YO00507 2555 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-209ENST00000367257 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-209ENST00000367257 LINC00313P59037 77 aa6.07□□□□□ -1.44
SYNE1-209ENST00000367257 X6R8D5 127 aa6.06□□□□□ -1.44
SYNE1-209ENST00000367257 IGKV2D-30A0A075B6S6 120 aa6.06□□□□□ -1.44
SYNE1-209ENST00000367257 SPINK1P00995 79 aa6.06□□□□□ -1.44
SYNE1-209ENST00000367257 IGKV2-30P06310 120 aa6.06□□□□□ -1.44
SYNE1-209ENST00000367257 EPG5Q9HCE0 2579 aa6.05□□□□□ -1.44
SYNE1-209ENST00000367257 A0A1W2PPR1 153 aa6.05□□□□□ -1.44
SYNE1-209ENST00000367257 UQCR11O14957 56 aa6.05□□□□□ -1.44
SYNE1-209ENST00000367257 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
SYNE1-209ENST00000367257 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
SYNE1-209ENST00000367257 HRNRQ86YZ3 2850 aaPredicted RBP6.05□□□□□ -1.44
SYNE1-209ENST00000367257 ABCA12Q86UK0 2595 aa6.04□□□□□ -1.44
SYNE1-209ENST00000367257 DNAH10OSP0CZ25 163 aa6.04□□□□□ -1.44
SYNE1-209ENST00000367257 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
SYNE1-209ENST00000367257 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
SYNE1-209ENST00000367257 RAI1Q7Z5J4 1906 aaPredicted RBP6.02□□□□□ -1.45
SYNE1-209ENST00000367257 SSBP3-AS1Q7Z2R9 100 aa6.02□□□□□ -1.45
SYNE1-209ENST00000367257 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
SYNE1-209ENST00000367257 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
SYNE1-209ENST00000367257 KRTAP10-9P60411 292 aa6.01□□□□□ -1.45
SYNE1-209ENST00000367257 OXTP01178 125 aa6.01□□□□□ -1.45
SYNE1-209ENST00000367257 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
SYNE1-209ENST00000367257 PRRC2CQ9Y520 2896 aaKnown RBP6.01□□□□□ -1.45
SYNE1-209ENST00000367257 ADGRG4Q8IZF6 3080 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 Q8NAQ8 132 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 CELSR2Q9HCU4 2923 aa6□□□□□ -1.45
SYNE1-209ENST00000367257 UBR5O95071 2799 aaPredicted RBP5.99□□□□□ -1.45
SYNE1-209ENST00000367257 IGLV1-50A0A075B6I6 118 aa5.99□□□□□ -1.45
SYNE1-209ENST00000367257 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
SYNE1-209ENST00000367257 CFAP46Q8IYW2 2715 aa5.99□□□□□ -1.45
SYNE1-209ENST00000367257 CUBNO60494 3623 aa5.98□□□□□ -1.45
SYNE1-209ENST00000367257 Q75L30 129 aa5.98□□□□□ -1.45
SYNE1-209ENST00000367257 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
SYNE1-209ENST00000367257 RTL8CO15255 209 aa5.97□□□□□ -1.45
SYNE1-209ENST00000367257 SPACA4Q8TDM5 124 aa5.97□□□□□ -1.45
SYNE1-209ENST00000367257 ASH1LQ9NR48 2969 aaKnown RBP5.97□□□□□ -1.45
SYNE1-209ENST00000367257 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
SYNE1-209ENST00000367257 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
SYNE1-209ENST00000367257 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
SYNE1-209ENST00000367257 PRR34Q9NV39 138 aa5.97□□□□□ -1.45
SYNE1-209ENST00000367257 TENM4Q6N022 2769 aa5.95□□□□□ -1.46
SYNE1-209ENST00000367257 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
SYNE1-209ENST00000367257 LINC00612Q8N6U2 182 aa5.95□□□□□ -1.46
SYNE1-209ENST00000367257 EIF4EBP3O60516 100 aaPredicted RBP5.95□□□□□ -1.46
SYNE1-209ENST00000367257 C8orf17Q9NRJ1 99 aa5.94□□□□□ -1.46
SYNE1-209ENST00000367257 PHF5AQ7RTV0 110 aaKnown RBP5.94□□□□□ -1.46
SYNE1-209ENST00000367257 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
SYNE1-209ENST00000367257 K7EQZ3 153 aa5.93□□□□□ -1.46
SYNE1-209ENST00000367257 SMR3AQ99954 134 aa5.93□□□□□ -1.46
SYNE1-209ENST00000367257 IGLV8-61A0A075B6I0 122 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms