RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 LINC00588Q9Y4M8 146 aa5.97□□□□□ -1.45
SYNE1-206ENST00000367253 AMELXQ99217 191 aa5.97□□□□□ -1.45
SYNE1-206ENST00000367253 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
SYNE1-206ENST00000367253 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
SYNE1-206ENST00000367253 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
SYNE1-206ENST00000367253 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
SYNE1-206ENST00000367253 TNRC18O15417 2968 aaPredicted RBP5.96□□□□□ -1.46
SYNE1-206ENST00000367253 A0A096LNJ9 63 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 UNC80Q8N2C7 3258 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 A0A1W2PPR1 153 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
SYNE1-206ENST00000367253 COL27A1Q8IZC6 1860 aaPredicted RBP5.95□□□□□ -1.46
SYNE1-206ENST00000367253 LINC00476Q8WZB0 136 aa5.95□□□□□ -1.46
SYNE1-206ENST00000367253 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
SYNE1-206ENST00000367253 A0A1B0GW54 56 aa5.94□□□□□ -1.46
SYNE1-206ENST00000367253 CDH23Q9H251 3354 aa5.94□□□□□ -1.46
SYNE1-206ENST00000367253 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
SYNE1-206ENST00000367253 ZNF575Q86XF7 245 aa5.94□□□□□ -1.46
SYNE1-206ENST00000367253 MOBPQ13875 183 aa5.93□□□□□ -1.46
SYNE1-206ENST00000367253 CSNK1G2-AS1Q8NCQ2 148 aa5.93□□□□□ -1.46
SYNE1-206ENST00000367253 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
SYNE1-206ENST00000367253 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
SYNE1-206ENST00000367253 Q6ZSA8 131 aa5.92□□□□□ -1.46
SYNE1-206ENST00000367253 Q1T7F1 81 aa5.91□□□□□ -1.46
SYNE1-206ENST00000367253 KRTAP21-3Q3LHN1 58 aa5.91□□□□□ -1.46
SYNE1-206ENST00000367253 ANKRD17O75179 2603 aaKnown RBP5.91□□□□□ -1.46
SYNE1-206ENST00000367253 IGLV4-60A0A075B6I1 120 aa5.91□□□□□ -1.46
SYNE1-206ENST00000367253 A8MTW9 85 aa5.9□□□□□ -1.46
SYNE1-206ENST00000367253 CASC10Q5T4H9 136 aa5.9□□□□□ -1.46
SYNE1-206ENST00000367253 OXTP01178 125 aa5.89□□□□□ -1.47
SYNE1-206ENST00000367253 IGLV5-37A0A075B6J1 123 aa5.89□□□□□ -1.47
SYNE1-206ENST00000367253 LCE6AA0A183 80 aa5.89□□□□□ -1.47
SYNE1-206ENST00000367253 A0A087WTM6 91 aa5.88□□□□□ -1.47
SYNE1-206ENST00000367253 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
SYNE1-206ENST00000367253 Q6ZQT0 140 aa5.87□□□□□ -1.47
SYNE1-206ENST00000367253 SETD2Q9BYW2 2564 aaPredicted RBP5.87□□□□□ -1.47
SYNE1-206ENST00000367253 SZT2Q5T011 3432 aa5.87□□□□□ -1.47
SYNE1-206ENST00000367253 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
SYNE1-206ENST00000367253 IGHV3OR16-9A0A0B4J2B5 98 aa5.87□□□□□ -1.47
SYNE1-206ENST00000367253 DNAH10OSP0CZ25 163 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 USP34Q70CQ2 3546 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 LOC110117498A0A087WWA1 95 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 C9orf129Q5T035 196 aaKnown RBP5.86□□□□□ -1.47
SYNE1-206ENST00000367253 Q96NJ1 140 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 MGAM2Q2M2H8 2515 aa5.86□□□□□ -1.47
SYNE1-206ENST00000367253 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
SYNE1-206ENST00000367253 MAST4O15021 2626 aa5.84□□□□□ -1.47
SYNE1-206ENST00000367253 C19orf73Q9NVV2 129 aa5.84□□□□□ -1.47
SYNE1-206ENST00000367253 IGLV7-46A0A075B6I9 117 aa5.83□□□□□ -1.48
SYNE1-206ENST00000367253 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
SYNE1-206ENST00000367253 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
SYNE1-206ENST00000367253 FAM218AQ96MZ4 157 aa5.82□□□□□ -1.48
SYNE1-206ENST00000367253 MGAQ8IWI9 3026 aa5.82□□□□□ -1.48
SYNE1-206ENST00000367253 USP24Q9UPU5 2620 aa5.82□□□□□ -1.48
SYNE1-206ENST00000367253 Q8NAQ8 132 aa5.82□□□□□ -1.48
SYNE1-206ENST00000367253 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
SYNE1-206ENST00000367253 WDFY4Q6ZS81 3184 aa5.8□□□□□ -1.48
SYNE1-206ENST00000367253 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
SYNE1-206ENST00000367253 LINC00167Q96N53 147 aa5.8□□□□□ -1.48
SYNE1-206ENST00000367253 RAI1Q7Z5J4 1906 aaPredicted RBP5.8□□□□□ -1.48
SYNE1-206ENST00000367253 LINC01546A6NGU7 62 aa5.79□□□□□ -1.48
SYNE1-206ENST00000367253 ZNF861PO60384 105 aa5.79□□□□□ -1.48
SYNE1-206ENST00000367253 AKAP13Q12802 2813 aa5.79□□□□□ -1.48
SYNE1-206ENST00000367253 Q75L30 129 aa5.79□□□□□ -1.48
SYNE1-206ENST00000367253 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
SYNE1-206ENST00000367253 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
SYNE1-206ENST00000367253 COL6A3P12111 3177 aa5.78□□□□□ -1.48
SYNE1-206ENST00000367253 TRBV7-4A0A0J9YYF1 115 aa5.78□□□□□ -1.48
SYNE1-206ENST00000367253 STAB1Q9NY15 2570 aa5.78□□□□□ -1.48
SYNE1-206ENST00000367253 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
SYNE1-206ENST00000367253 APLNQ9ULZ1 77 aa5.77□□□□□ -1.49
SYNE1-206ENST00000367253 HECTD1Q9ULT8 2610 aa5.77□□□□□ -1.49
SYNE1-206ENST00000367253 DSPP15924 2871 aaKnown RBP5.77□□□□□ -1.49
SYNE1-206ENST00000367253 REV3LO60673 3130 aa5.77□□□□□ -1.49
SYNE1-206ENST00000367253 HELZ2Q9BYK8 2649 aaKnown RBP5.77□□□□□ -1.49
SYNE1-206ENST00000367253 A8MWP4 228 aa5.77□□□□□ -1.49
SYNE1-206ENST00000367253 XIRP2A4UGR9 3374 aa5.76□□□□□ -1.49
SYNE1-206ENST00000367253 CENPEQ02224 2701 aa5.76□□□□□ -1.49
SYNE1-206ENST00000367253 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
SYNE1-206ENST00000367253 KRTAP10-11P60412 298 aa5.76□□□□□ -1.49
SYNE1-206ENST00000367253 SETXQ7Z333 2677 aaKnown RBP5.75□□□□□ -1.49
SYNE1-206ENST00000367253 Q5VV11 94 aa5.75□□□□□ -1.49
SYNE1-206ENST00000367253 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
SYNE1-206ENST00000367253 LAMA1P25391 3075 aa5.75□□□□□ -1.49
SYNE1-206ENST00000367253 VPS13AQ96RL7 3174 aa5.74□□□□□ -1.49
SYNE1-206ENST00000367253 CFAP46Q8IYW2 2715 aa5.73□□□□□ -1.49
SYNE1-206ENST00000367253 Q6ZRX8 168 aa5.73□□□□□ -1.49
SYNE1-206ENST00000367253 Q8N9P0 234 aaPredicted RBP5.73□□□□□ -1.49
SYNE1-206ENST00000367253 IGSF10Q6WRI0 2623 aa5.72□□□□□ -1.49
SYNE1-206ENST00000367253 HRES1P13985 223 aa5.72□□□□□ -1.49
SYNE1-206ENST00000367253 TNP2Q05952 138 aa5.72□□□□□ -1.49
SYNE1-206ENST00000367253 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
SYNE1-206ENST00000367253 K7EQZ3 153 aa5.72□□□□□ -1.49
SYNE1-206ENST00000367253 Q5VSD8 79 aa5.71□□□□□ -1.5
SYNE1-206ENST00000367253 OCR1Q9BZK8 76 aa5.71□□□□□ -1.5
SYNE1-206ENST00000367253 ATRQ13535 2644 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms