RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 Q6ZRP5 223 aa8.12□□□□□ -1.11
CDC42BPA-203ENST00000366766 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
CDC42BPA-203ENST00000366766 PCOTHQ58A44 107 aa8.11□□□□□ -1.11
CDC42BPA-203ENST00000366766 HTTP42858 3142 aa8.11□□□□□ -1.11
CDC42BPA-203ENST00000366766 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
CDC42BPA-203ENST00000366766 NBDYA0A0U1RRE5 68 aa8.11□□□□□ -1.11
CDC42BPA-203ENST00000366766 A8MWP4 228 aa8.1□□□□□ -1.11
CDC42BPA-203ENST00000366766 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
CDC42BPA-203ENST00000366766 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
CDC42BPA-203ENST00000366766 A0A096LNT2 108 aa8.1□□□□□ -1.11
CDC42BPA-203ENST00000366766 STAB2Q8WWQ8 2551 aa8.09□□□□□ -1.11
CDC42BPA-203ENST00000366766 LINC00588Q9Y4M8 146 aa8.09□□□□□ -1.11
CDC42BPA-203ENST00000366766 C8orf87E5RJ46 101 aa8.09□□□□□ -1.11
CDC42BPA-203ENST00000366766 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
CDC42BPA-203ENST00000366766 LINC01600Q96MT4 127 aa8.08□□□□□ -1.12
CDC42BPA-203ENST00000366766 VPS13AQ96RL7 3174 aa8.08□□□□□ -1.12
CDC42BPA-203ENST00000366766 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
CDC42BPA-203ENST00000366766 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
CDC42BPA-203ENST00000366766 A0A1B0GU69 56 aa8.06□□□□□ -1.12
CDC42BPA-203ENST00000366766 TM2D3Q9BRN9 247 aa8.06□□□□□ -1.12
CDC42BPA-203ENST00000366766 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
CDC42BPA-203ENST00000366766 LINC00313P59037 77 aa8.03□□□□□ -1.12
CDC42BPA-203ENST00000366766 IGLV1-50A0A075B6I6 118 aa8.03□□□□□ -1.12
CDC42BPA-203ENST00000366766 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
CDC42BPA-203ENST00000366766 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
CDC42BPA-203ENST00000366766 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
CDC42BPA-203ENST00000366766 RTL8CO15255 209 aa8.01□□□□□ -1.13
CDC42BPA-203ENST00000366766 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-203ENST00000366766 C19orf73Q9NVV2 129 aa8.01□□□□□ -1.13
CDC42BPA-203ENST00000366766 UBR5O95071 2799 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-203ENST00000366766 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
CDC42BPA-203ENST00000366766 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-203ENST00000366766 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
CDC42BPA-203ENST00000366766 PRR15Q8IV56 129 aa7.99□□□□□ -1.13
CDC42BPA-203ENST00000366766 C15orf56Q8N910 161 aa7.98□□□□□ -1.13
CDC42BPA-203ENST00000366766 FRYQ5TBA9 3013 aa7.98□□□□□ -1.13
CDC42BPA-203ENST00000366766 ITPR1Q14643 2758 aa7.98□□□□□ -1.13
CDC42BPA-203ENST00000366766 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
CDC42BPA-203ENST00000366766 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-203ENST00000366766 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
CDC42BPA-203ENST00000366766 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
CDC42BPA-203ENST00000366766 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 SPAG11AQ6PDA7 123 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 K7EQZ3 153 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 FRYLO94915 3013 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 SPINK1P00995 79 aa7.95□□□□□ -1.14
CDC42BPA-203ENST00000366766 CNBPP62633 177 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-203ENST00000366766 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
CDC42BPA-203ENST00000366766 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
CDC42BPA-203ENST00000366766 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
CDC42BPA-203ENST00000366766 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
CDC42BPA-203ENST00000366766 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
CDC42BPA-203ENST00000366766 Q8N377 158 aa7.92□□□□□ -1.14
CDC42BPA-203ENST00000366766 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-203ENST00000366766 NBEAQ8NFP9 2946 aa7.92□□□□□ -1.14
CDC42BPA-203ENST00000366766 UTP20O75691 2785 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-203ENST00000366766 ZNF861PO60384 105 aa7.91□□□□□ -1.14
CDC42BPA-203ENST00000366766 APCP25054 2843 aa7.91□□□□□ -1.14
CDC42BPA-203ENST00000366766 H7BZZ5 65 aa7.9□□□□□ -1.14
CDC42BPA-203ENST00000366766 BAHCC1Q9P281 2608 aa7.9□□□□□ -1.14
CDC42BPA-203ENST00000366766 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
CDC42BPA-203ENST00000366766 C9orf163Q8N9P6 203 aa7.9□□□□□ -1.14
CDC42BPA-203ENST00000366766 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
CDC42BPA-203ENST00000366766 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.15
CDC42BPA-203ENST00000366766 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.15
CDC42BPA-203ENST00000366766 FAM168BA1KXE4 195 aa7.9□□□□□ -1.15
CDC42BPA-203ENST00000366766 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
CDC42BPA-203ENST00000366766 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
CDC42BPA-203ENST00000366766 COA5Q86WW8 74 aa7.88□□□□□ -1.15
CDC42BPA-203ENST00000366766 WDFY4Q6ZS81 3184 aa7.88□□□□□ -1.15
CDC42BPA-203ENST00000366766 WIPF1O43516 503 aa7.87□□□□□ -1.15
CDC42BPA-203ENST00000366766 UQCR11O14957 56 aa7.87□□□□□ -1.15
CDC42BPA-203ENST00000366766 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
CDC42BPA-203ENST00000366766 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
CDC42BPA-203ENST00000366766 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-203ENST00000366766 ZNF575Q86XF7 245 aa7.85□□□□□ -1.15
CDC42BPA-203ENST00000366766 LAMA3Q16787 3333 aa7.85□□□□□ -1.15
CDC42BPA-203ENST00000366766 MKI67P46013 3256 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-203ENST00000366766 K7EIL1 84 aa7.84□□□□□ -1.15
CDC42BPA-203ENST00000366766 KRTAP10-11P60412 298 aa7.83□□□□□ -1.16
CDC42BPA-203ENST00000366766 TACC2O95359 2948 aa7.83□□□□□ -1.16
CDC42BPA-203ENST00000366766 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
CDC42BPA-203ENST00000366766 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
CDC42BPA-203ENST00000366766 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.162e-6■■■■□ 19.4
CDC42BPA-203ENST00000366766 CD164Q04900 197 aa7.8□□□□□ -1.16
CDC42BPA-203ENST00000366766 KRTAP1-3Q8IUG1 177 aa7.8□□□□□ -1.16
CDC42BPA-203ENST00000366766 PRUNE2Q8WUY3 3088 aa7.8□□□□□ -1.16
CDC42BPA-203ENST00000366766 Q96NJ1 140 aa7.8□□□□□ -1.16
CDC42BPA-203ENST00000366766 A0A087WTM6 91 aa7.79□□□□□ -1.16
CDC42BPA-203ENST00000366766 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
CDC42BPA-203ENST00000366766 KALRNO60229 2985 aa7.77□□□□□ -1.17
CDC42BPA-203ENST00000366766 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
CDC42BPA-203ENST00000366766 LRBAP50851 2863 aa7.76□□□□□ -1.17
CDC42BPA-203ENST00000366766 KRTAP1-1Q07627 177 aa7.76□□□□□ -1.17
CDC42BPA-203ENST00000366766 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
CDC42BPA-203ENST00000366766 IGLV7-43P04211 117 aa7.74□□□□□ -1.17
CDC42BPA-203ENST00000366766 KRTAP10-3P60369 221 aa7.74□□□□□ -1.17
CDC42BPA-203ENST00000366766 A8MUN3 132 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms