RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 KRTAP13-3Q3SY46 172 aa4.82□□□□□ -1.64
HMGB1P39-201ENST00000366304 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
HMGB1P39-201ENST00000366304 MRPL35Q9NZE8 188 aaKnown RBP4.82□□□□□ -1.64
HMGB1P39-201ENST00000366304 A0A1B0GUT8 65 aa4.81□□□□□ -1.64
HMGB1P39-201ENST00000366304 LINC00242Q5T6M2 205 aa4.81□□□□□ -1.64
HMGB1P39-201ENST00000366304 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
HMGB1P39-201ENST00000366304 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
HMGB1P39-201ENST00000366304 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
HMGB1P39-201ENST00000366304 ACYP1P07311 99 aa4.8□□□□□ -1.64
HMGB1P39-201ENST00000366304 RIGQ13278 110 aa4.8□□□□□ -1.64
HMGB1P39-201ENST00000366304 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
HMGB1P39-201ENST00000366304 URB1-AS1Q96HZ7 61 aa4.8□□□□□ -1.64
HMGB1P39-201ENST00000366304 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 MYMXA0A1B0GTQ4 84 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 I3L3M4 83 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 ATP5LO75964 103 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 NPYP01303 97 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
HMGB1P39-201ENST00000366304 FXYD2P54710 66 aa4.78□□□□□ -1.64
HMGB1P39-201ENST00000366304 SEC61GP60059 68 aa4.78□□□□□ -1.64
HMGB1P39-201ENST00000366304 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 HBDP02042 147 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 AMN1Q8IY45 258 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 KIR2DL4Q99706 377 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 NAA38Q9BRA0 125 aaKnown RBP4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 USH2AO75445 5202 aa4.77□□□□□ -1.65
HMGB1P39-201ENST00000366304 TRBV6-5A0A0K0K1A5 114 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 NDUFA1O15239 70 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 CXCL5P42830 114 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 NMUP48645 174 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 TMEM258P61165 79 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 HERVK_113P63121 156 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 HIST1H4GQ99525 98 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 UBE2D4Q9Y2X8 147 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
HMGB1P39-201ENST00000366304 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 NDUFC2-KCTD14E9PQ53 114 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 BCE1O60756 84 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 TRACP01848 142 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 PSMB2P49721 201 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 POLR2KP53803 58 aaKnown RBP4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 FAM104BQ5XKR9 115 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 C2orf82Q6UX34 121 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 V9GYY9 64 aa4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P39-201ENST00000366304 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 DPM2O94777 84 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 PPP1R17O96001 155 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 IGKCP01834 107 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 RPL28P46779 137 aaKnown RBP4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 MRPL51Q4U2R6 128 aaKnown RBP4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 TMEM170BQ5T4T1 132 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 LINC00337Q8N6G1 96 aa4.74□□□□□ -1.65
HMGB1P39-201ENST00000366304 TRBV27A0A0K0K1C4 114 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 SMKR1H3BMG3 65 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 TRIAP1O43715 76 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 COX7CP15954 63 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 CKS2P33552 79 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 FAM229BQ4G0N7 80 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 NRACQ8N912 160 aa4.73□□□□□ -1.65
HMGB1P39-201ENST00000366304 TINCRA0A1B0GVN0 87 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 D6R8Y8 96 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 PLNP26678 52 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 FCER1GP30273 86 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 XAGE1AQ9HD64 81 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 NXT2Q9NPJ8 142 aaKnown RBP4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 TP73-AS1Q9UF72 201 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 LAMTOR3Q9UHA4 124 aa4.72□□□□□ -1.65
HMGB1P39-201ENST00000366304 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 LOC107984156A0A0G2JMH3 177 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 RPL37AP8A6NKH3 93 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 ATOX1O00244 68 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 SLC25A20O43772 301 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 FP248Q71RG6 208 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 ARL17AQ8IVW1 177 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 ORMDL3Q8N138 153 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
HMGB1P39-201ENST00000366304 IGKV2D-26A0A0A0MRZ7 120 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 H3BT86 120 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 VCYO14598 125 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 NDUFC2O95298 119 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 RPL39P62891 51 aaKnown RBP4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 C6orf226Q5I0X4 101 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms