RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 VPS8Q8N3P4 1428 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 RAPGEF2Q9Y4G8 1499 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 PLXNC1O60486 1568 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 A0A0G2JMZ2 1700 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 MARF1Q9Y4F3 1742 aaKnown RBP-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 RGPD2P0DJD1 1756 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 PAPPA2Q9BXP8 1791 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 M0QZ58 72 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 CCL22O00626 93 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 APOC2P02655 101 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 MT-ATP8P03928 68 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 MGPP08493 103 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 HMGA1P17096 107 aaKnown RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 FGF7P21781 194 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 BTG2P78543 158 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 MRPL54Q6P161 138 aaKnown RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 COMMD6Q7Z4G1 85 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 C5orf38Q86SI9 138 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 C8orf59Q8N0T1 100 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 C9orf62Q8N4C0 152 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 PP6455Q8WZ26 134 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 LEAP2Q969E1 77 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 UQCR10Q9UDW1 63 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 KTN1Q86UP2 1357 aaKnown RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 TEX14Q8IWB6 1497 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 MLH3Q9UHC1 1453 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 CICQ96RK0 1608 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 KIF20BQ96Q89 1820 aa-0.25□□□□□ -2.45
RNU4-48P-201ENST00000365559 CROCC2H7BZ55 1655 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 TOPAZ1Q8N9V7 1692 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 CC2D2AQ9P2K1 1620 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 MAST1Q9Y2H9 1570 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 SETBP1Q9Y6X0 1596 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 CUX1P39880 1505 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 ZFYVE16Q7Z3T8 1539 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 EHBP1L1Q8N3D4 1523 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 LRRC7Q96NW7 1537 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 A2ML1A8K2U0 1454 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 ABCC10Q5T3U5 1492 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 MAGI1Q96QZ7 1491 aaPredicted RBP-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 EEA1Q15075 1411 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 NSD3Q9BZ95 1437 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 TRBV7-4A0A0J9YYF1 115 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 MMP24-AS1A0A0U1RRL7 71 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 CHKB-CPT1BH3BT56 60 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 NDUFA2O43678 99 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 UBA52P62987 128 aaKnown RBP-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 DEFB133Q30KQ1 61 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 TDRG1Q3Y452 100 aa-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 RPS27LQ71UM5 84 aaKnown RBP-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 TMEM263Q8WUH6 116 aaKnown RBP-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 NXT2Q9NPJ8 142 aaKnown RBP-0.26□□□□□ -2.45
RNU4-48P-201ENST00000365559 PREX2Q70Z35 1606 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 EIF4G3O43432 1585 aaKnown RBP-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 NRKQ7Z2Y5 1582 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 PEG3Q9GZU2 1588 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 DIP2CQ9Y2E4 1556 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 CLASP1Q7Z460 1538 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 RRBP1Q9P2E9 1410 aaKnown RBP-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 DEFB131BA0A096LNP1 70 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 UBE2L5PA0A1B0GUS4 154 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 LOC100130705A0A1B0GUX0 176 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 FAM223BA6NKX1 122 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 SYS1-DBNDD2H3BUS1 97 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 H7BZZ5 65 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 K7EP13 123 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 IGLC1P0CG04 106 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 AKAIN1P0CW23 69 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 HTN1P15515 57 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 S100PP25815 95 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 UBE2D2P62837 147 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 S100A12P80511 92 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 TFF3Q07654 80 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 C9orf153Q5TBE3 101 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 C10orf113Q5VZT2 155 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 C6orf201Q7Z4U5 140 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 WFDC13Q8IUB5 93 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 FAM223AQ8IWN6 122 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 DEFB124Q8NES8 71 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 DEFB105AQ8NG35 78 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 SPRR4Q96PI1 79 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 LINC00474Q9P2X8 69 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 ARL2-SNX15V9GYD0 113 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 TJP1Q07157 1748 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 CDC42BPAQ5VT25 1732 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 KIAA1551Q9HCM1 1747 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 NRXN3Q9Y4C0 1643 aa-0.27□□□□□ -2.45
RNU4-48P-201ENST00000365559 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 NFAT5O94916 1531 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 MAP3K1Q13233 1512 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 NEXMIFQ5QGS0 1516 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 DUOX2Q9NRD8 1548 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 MYOM2P54296 1465 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 RALGAPBQ86X10 1494 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 PLEKHH2Q8IVE3 1493 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 CD163L1Q9NR16 1453 aa-0.28□□□□□ -2.45
RNU4-48P-201ENST00000365559 NRXN1Q9ULB1 1477 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms