RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 PRR34Q9NV39 138 aa6.97□□□□□ -1.29
CACNA1S-201ENST00000362061 LOC110117498A0A087WWA1 95 aa6.96□□□□□ -1.29
CACNA1S-201ENST00000362061 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.29
CACNA1S-201ENST00000362061 OBSCN-AS1Q96MR7 158 aa6.96□□□□□ -1.3
CACNA1S-201ENST00000362061 DSCR10P59022 87 aa6.95□□□□□ -1.3
CACNA1S-201ENST00000362061 A8MWP4 228 aa6.95□□□□□ -1.3
CACNA1S-201ENST00000362061 MRPL34Q9BQ48 92 aaKnown RBP6.95□□□□□ -1.3
CACNA1S-201ENST00000362061 IGLV7-43P04211 117 aa6.95□□□□□ -1.3
CACNA1S-201ENST00000362061 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
CACNA1S-201ENST00000362061 H3BPC8 53 aa6.94□□□□□ -1.3
CACNA1S-201ENST00000362061 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
CACNA1S-201ENST00000362061 ANAPC11Q9NYG5 84 aa6.94□□□□□ -1.3
CACNA1S-201ENST00000362061 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
CACNA1S-201ENST00000362061 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
CACNA1S-201ENST00000362061 LINC00612Q8N6U2 182 aa6.92□□□□□ -1.3
CACNA1S-201ENST00000362061 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
CACNA1S-201ENST00000362061 DNAH12Q6ZR08 3092 aa6.92□□□□□ -1.3
CACNA1S-201ENST00000362061 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
CACNA1S-201ENST00000362061 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
CACNA1S-201ENST00000362061 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
CACNA1S-201ENST00000362061 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
CACNA1S-201ENST00000362061 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.3
CACNA1S-201ENST00000362061 TNP2Q05952 138 aa6.89□□□□□ -1.31
CACNA1S-201ENST00000362061 SPINT4Q6UDR6 99 aa6.89□□□□□ -1.31
CACNA1S-201ENST00000362061 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
CACNA1S-201ENST00000362061 K7EQZ3 153 aa6.88□□□□□ -1.31
CACNA1S-201ENST00000362061 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
CACNA1S-201ENST00000362061 PCNTO95613 3336 aa6.88□□□□□ -1.31
CACNA1S-201ENST00000362061 LITAFQ99732 161 aa6.88□□□□□ -1.31
CACNA1S-201ENST00000362061 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
CACNA1S-201ENST00000362061 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
CACNA1S-201ENST00000362061 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
CACNA1S-201ENST00000362061 FLNAP21333 2647 aaKnown RBP6.85□□□□□ -1.31
CACNA1S-201ENST00000362061 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
CACNA1S-201ENST00000362061 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
CACNA1S-201ENST00000362061 A0A0G2JQZ4 141 aa6.84□□□□□ -1.31
CACNA1S-201ENST00000362061 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
CACNA1S-201ENST00000362061 SPRR4Q96PI1 79 aa6.84□□□□□ -1.32
CACNA1S-201ENST00000362061 BPTFQ12830 3046 aa6.83□□□□□ -1.32
CACNA1S-201ENST00000362061 Q8N377 158 aa6.83□□□□□ -1.32
CACNA1S-201ENST00000362061 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
CACNA1S-201ENST00000362061 PRRC2CQ9Y520 2896 aaKnown RBP6.82□□□□□ -1.32
CACNA1S-201ENST00000362061 LINC01600Q96MT4 127 aa6.81□□□□□ -1.32
CACNA1S-201ENST00000362061 Q6ZSA8 131 aa6.8□□□□□ -1.32
CACNA1S-201ENST00000362061 CFAP46Q8IYW2 2715 aa6.79□□□□□ -1.32
CACNA1S-201ENST00000362061 M0R2T5 61 aa6.78□□□□□ -1.32
CACNA1S-201ENST00000362061 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
CACNA1S-201ENST00000362061 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
CACNA1S-201ENST00000362061 SETXQ7Z333 2677 aaKnown RBP6.78□□□□□ -1.32
CACNA1S-201ENST00000362061 LINC01554Q52M75 96 aa6.77□□□□□ -1.32
CACNA1S-201ENST00000362061 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
CACNA1S-201ENST00000362061 ERC2-IT1O76042 136 aa6.77□□□□□ -1.33
CACNA1S-201ENST00000362061 STAB1Q9NY15 2570 aa6.76□□□□□ -1.33
CACNA1S-201ENST00000362061 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
CACNA1S-201ENST00000362061 COA5Q86WW8 74 aa6.74□□□□□ -1.33
CACNA1S-201ENST00000362061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
CACNA1S-201ENST00000362061 CEP350Q5VT06 3117 aa6.72□□□□□ -1.33
CACNA1S-201ENST00000362061 UQCR11O14957 56 aa6.7□□□□□ -1.34
CACNA1S-201ENST00000362061 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
CACNA1S-201ENST00000362061 WIPF1O43516 503 aa6.7□□□□□ -1.34
CACNA1S-201ENST00000362061 Q8N1X5 172 aa6.7□□□□□ -1.34
CACNA1S-201ENST00000362061 TEP1Q99973 2627 aaKnown RBP6.68□□□□□ -1.34
CACNA1S-201ENST00000362061 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
CACNA1S-201ENST00000362061 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
CACNA1S-201ENST00000362061 C5orf42Q9H799 3197 aa6.66□□□□□ -1.34
CACNA1S-201ENST00000362061 CENPEQ02224 2701 aa6.66□□□□□ -1.34
CACNA1S-201ENST00000362061 CD164Q04900 197 aa6.65□□□□□ -1.34
CACNA1S-201ENST00000362061 A0A0D9SG42 100 aa6.65□□□□□ -1.35
CACNA1S-201ENST00000362061 LCE6AA0A183 80 aa6.64□□□□□ -1.35
CACNA1S-201ENST00000362061 FAM229BQ4G0N7 80 aa6.63□□□□□ -1.35
CACNA1S-201ENST00000362061 Q5VSD8 79 aa6.62□□□□□ -1.35
CACNA1S-201ENST00000362061 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
CACNA1S-201ENST00000362061 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CACNA1S-201ENST00000362061 FAM104AQ969W3 186 aa6.62□□□□□ -1.35
CACNA1S-201ENST00000362061 A8MUN3 132 aa6.61□□□□□ -1.35
CACNA1S-201ENST00000362061 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
CACNA1S-201ENST00000362061 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CACNA1S-201ENST00000362061 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
CACNA1S-201ENST00000362061 TEX15Q9BXT5 2789 aa6.58□□□□□ -1.36
CACNA1S-201ENST00000362061 CYP4F30PQ9H0H9 118 aa6.57□□□□□ -1.36
CACNA1S-201ENST00000362061 CAMK2N1Q7Z7J9 78 aa6.57□□□□□ -1.36
CACNA1S-201ENST00000362061 HTTP42858 3142 aa6.56□□□□□ -1.36
CACNA1S-201ENST00000362061 BAHCC1Q9P281 2608 aa6.56□□□□□ -1.36
CACNA1S-201ENST00000362061 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
CACNA1S-201ENST00000362061 SEC61BP60468 96 aaKnown RBP6.55□□□□□ -1.36
CACNA1S-201ENST00000362061 CHD7Q9P2D1 2997 aa6.53□□□□□ -1.36
CACNA1S-201ENST00000362061 A0A0C4DFX4 3053 aa6.52□□□□□ -1.37
CACNA1S-201ENST00000362061 CR1P17927 2039 aa6.52□□□□□ -1.37
CACNA1S-201ENST00000362061 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
CACNA1S-201ENST00000362061 MKI67P46013 3256 aaKnown RBP6.51□□□□□ -1.37
CACNA1S-201ENST00000362061 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
CACNA1S-201ENST00000362061 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
CACNA1S-201ENST00000362061 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
CACNA1S-201ENST00000362061 BRCA2P51587 3418 aa6.51□□□□□ -1.37
CACNA1S-201ENST00000362061 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
CACNA1S-201ENST00000362061 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
CACNA1S-201ENST00000362061 AKAP13Q12802 2813 aa6.5□□□□□ -1.37
CACNA1S-201ENST00000362061 KRTAP10-2P60368 255 aa6.49□□□□□ -1.37
CACNA1S-201ENST00000362061 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
CACNA1S-201ENST00000362061 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms