RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 LINC00313P59037 77 aa9.1□□□□□ -0.95
SMC5-201ENST00000361138 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
SMC5-201ENST00000361138 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
SMC5-201ENST00000361138 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
SMC5-201ENST00000361138 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
SMC5-201ENST00000361138 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
SMC5-201ENST00000361138 PKD1L2Q7Z442 2459 aa9.09□□□□□ -0.95
SMC5-201ENST00000361138 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
SMC5-201ENST00000361138 ABCA2Q9BZC7 2435 aa9.08□□□□□ -0.96
SMC5-201ENST00000361138 OXTP01178 125 aa9.06□□□□□ -0.96
SMC5-201ENST00000361138 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
SMC5-201ENST00000361138 MYO18BQ8IUG5 2567 aa9.06□□□□□ -0.96
SMC5-201ENST00000361138 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
SMC5-201ENST00000361138 CDC42SE1Q9NRR8 79 aa9.05□□□□□ -0.96
SMC5-201ENST00000361138 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
SMC5-201ENST00000361138 MDFIQ99750 246 aa9.05□□□□□ -0.96
SMC5-201ENST00000361138 LCA10Q71F78 164 aa9.04□□□□□ -0.96
SMC5-201ENST00000361138 A0A1B0GVX0 72 aa9.02□□□□□ -0.96
SMC5-201ENST00000361138 UQCR11O14957 56 aa9.02□□□□□ -0.96
SMC5-201ENST00000361138 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
SMC5-201ENST00000361138 DSCR10P59022 87 aa9.01□□□□□ -0.97
SMC5-201ENST00000361138 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
SMC5-201ENST00000361138 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
SMC5-201ENST00000361138 MIR22HGQ0VDD5 57 aa9□□□□□ -0.97
SMC5-201ENST00000361138 TRANK1O15050 2925 aa9□□□□□ -0.97
SMC5-201ENST00000361138 RTL8CO15255 209 aa8.99□□□□□ -0.97
SMC5-201ENST00000361138 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
SMC5-201ENST00000361138 Q8NDZ9 215 aa8.98□□□□□ -0.97
SMC5-201ENST00000361138 SPRR4Q96PI1 79 aa8.98□□□□□ -0.97
SMC5-201ENST00000361138 ZFYVE26Q68DK2 2539 aa8.97□□□□□ -0.97
SMC5-201ENST00000361138 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
SMC5-201ENST00000361138 MYO9AB2RTY4 2548 aa8.94□□□□□ -0.98
SMC5-201ENST00000361138 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
SMC5-201ENST00000361138 KRTAP10-11P60412 298 aa8.93□□□□□ -0.98
SMC5-201ENST00000361138 Q75L30 129 aa8.93□□□□□ -0.98
SMC5-201ENST00000361138 CASC10Q5T4H9 136 aa8.92□□□□□ -0.98
SMC5-201ENST00000361138 FN1P02751 2386 aaKnown RBP8.91□□□□□ -0.98
SMC5-201ENST00000361138 EPG5Q9HCE0 2579 aa8.91□□□□□ -0.98
SMC5-201ENST00000361138 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
SMC5-201ENST00000361138 Q96NJ1 140 aa8.91□□□□□ -0.98
SMC5-201ENST00000361138 DOPEY1Q5JWR5 2465 aa8.91□□□□□ -0.98
SMC5-201ENST00000361138 ANKRD17O75179 2603 aaKnown RBP8.9□□□□□ -0.98
SMC5-201ENST00000361138 JMJD1CQ15652 2540 aa8.9□□□□□ -0.98
SMC5-201ENST00000361138 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.98
SMC5-201ENST00000361138 PRUNE2Q8WUY3 3088 aa8.9□□□□□ -0.99
SMC5-201ENST00000361138 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
SMC5-201ENST00000361138 LRRK2Q5S007 2527 aa8.89□□□□□ -0.99
SMC5-201ENST00000361138 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
SMC5-201ENST00000361138 FASNP49327 2511 aaKnown RBP8.88□□□□□ -0.99
SMC5-201ENST00000361138 POLQO75417 2590 aa8.87□□□□□ -0.99
SMC5-201ENST00000361138 TLN2Q9Y4G6 2542 aa8.86□□□□□ -0.99
SMC5-201ENST00000361138 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
SMC5-201ENST00000361138 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
SMC5-201ENST00000361138 Q8N9P0 234 aaPredicted RBP8.86□□□□□ -0.99
SMC5-201ENST00000361138 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
SMC5-201ENST00000361138 Q5VV11 94 aa8.84□□□□□ -0.99
SMC5-201ENST00000361138 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
SMC5-201ENST00000361138 ZNF861PO60384 105 aa8.83□□□□□ -1
SMC5-201ENST00000361138 UNC80Q8N2C7 3258 aa8.83□□□□□ -1
SMC5-201ENST00000361138 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
SMC5-201ENST00000361138 USP9YO00507 2555 aaPredicted RBP8.81□□□□□ -1
SMC5-201ENST00000361138 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
SMC5-201ENST00000361138 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
SMC5-201ENST00000361138 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
SMC5-201ENST00000361138 ANAPC11Q9NYG5 84 aa8.8□□□□□ -1
SMC5-201ENST00000361138 SZT2Q5T011 3432 aa8.78□□□□□ -1
SMC5-201ENST00000361138 LAMA2P24043 3122 aaKnown RBP8.78□□□□□ -1
SMC5-201ENST00000361138 PRR26Q8N8Z3 221 aa8.77□□□□□ -1
SMC5-201ENST00000361138 SPRR1AP35321 89 aa8.76□□□□□ -1.01
SMC5-201ENST00000361138 PRRC2CQ9Y520 2896 aaKnown RBP8.75□□□□□ -1.01
SMC5-201ENST00000361138 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
SMC5-201ENST00000361138 ACANP16112 2415 aa8.74□□□□□ -1.01
SMC5-201ENST00000361138 PSORS1C2Q9UIG4 136 aa8.72□□□□□ -1.01
SMC5-201ENST00000361138 K7EIL1 84 aa8.72□□□□□ -1.01
SMC5-201ENST00000361138 HECTD1Q9ULT8 2610 aa8.7□□□□□ -1.02
SMC5-201ENST00000361138 A0A087WTM6 91 aa8.7□□□□□ -1.02
SMC5-201ENST00000361138 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
SMC5-201ENST00000361138 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
SMC5-201ENST00000361138 HRES1P13985 223 aa8.69□□□□□ -1.02
SMC5-201ENST00000361138 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
SMC5-201ENST00000361138 MTORP42345 2549 aa8.68□□□□□ -1.02
SMC5-201ENST00000361138 F8P00451 2351 aa8.68□□□□□ -1.02
SMC5-201ENST00000361138 TNRC18O15417 2968 aaPredicted RBP8.67□□□□□ -1.02
SMC5-201ENST00000361138 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
SMC5-201ENST00000361138 SPINK7P58062 85 aa8.66□□□□□ -1.02
SMC5-201ENST00000361138 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
SMC5-201ENST00000361138 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
SMC5-201ENST00000361138 APLNQ9ULZ1 77 aa8.65□□□□□ -1.02
SMC5-201ENST00000361138 SETD2Q9BYW2 2564 aaPredicted RBP8.65□□□□□ -1.03
SMC5-201ENST00000361138 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
SMC5-201ENST00000361138 Q8N1X5 172 aa8.64□□□□□ -1.03
SMC5-201ENST00000361138 CR1P17927 2039 aa8.63□□□□□ -1.03
SMC5-201ENST00000361138 TNP2Q05952 138 aa8.63□□□□□ -1.03
SMC5-201ENST00000361138 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
SMC5-201ENST00000361138 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
SMC5-201ENST00000361138 ZNF292O60281 2723 aa8.62□□□□□ -1.03
SMC5-201ENST00000361138 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
SMC5-201ENST00000361138 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
SMC5-201ENST00000361138 SPTBN5Q9NRC6 3674 aaKnown RBP8.6□□□□□ -1.03
SMC5-201ENST00000361138 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms