RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 HUWE1Q7Z6Z7 4374 aaKnown RBP17.13■□□□□ 0.33
CUEDC1-201ENST00000360238 IGLV5-37A0A075B6J1 123 aa17.13■□□□□ 0.33
CUEDC1-201ENST00000360238 DNAH1Q9P2D7 4330 aa17.13■□□□□ 0.33
CUEDC1-201ENST00000360238 Q6ZVQ6 151 aa17.12■□□□□ 0.33
CUEDC1-201ENST00000360238 COL6A5A8TX70 2615 aa17.11■□□□□ 0.33
CUEDC1-201ENST00000360238 SERP2Q8N6R1 65 aa17.11■□□□□ 0.33
CUEDC1-201ENST00000360238 NBEAL1Q6ZS30 2694 aa17.11■□□□□ 0.33
CUEDC1-201ENST00000360238 FAM19A1Q7Z5A9 133 aa17.1■□□□□ 0.33
CUEDC1-201ENST00000360238 CRYGAP11844 174 aa17.09■□□□□ 0.33
CUEDC1-201ENST00000360238 LINC01547P58512 204 aaPredicted RBP17.08■□□□□ 0.33
CUEDC1-201ENST00000360238 PRYO14603 147 aa17.06■□□□□ 0.32
CUEDC1-201ENST00000360238 CXCL6P80162 114 aa17.05■□□□□ 0.32
CUEDC1-201ENST00000360238 IGLV1-50A0A075B6I6 118 aa17.03■□□□□ 0.32
CUEDC1-201ENST00000360238 HAMPP81172 84 aa17.03■□□□□ 0.32
CUEDC1-201ENST00000360238 DHRS4-AS1Q9P1J3 65 aa17.03■□□□□ 0.32
CUEDC1-201ENST00000360238 FAM168BA1KXE4 195 aa17.02■□□□□ 0.32
CUEDC1-201ENST00000360238 Q6ZRX8 168 aa17.02■□□□□ 0.32
CUEDC1-201ENST00000360238 KRTAP4-16G5E9R7 235 aaPredicted RBP17.02■□□□□ 0.31
CUEDC1-201ENST00000360238 SPRR1AP35321 89 aa17.01■□□□□ 0.31
CUEDC1-201ENST00000360238 LOC107984640A0A0U1RRK4 108 aa17.01■□□□□ 0.31
CUEDC1-201ENST00000360238 RPL37AP8A6NKH3 93 aa16.98■□□□□ 0.31
CUEDC1-201ENST00000360238 KRTAP7-1Q8IUC3 87 aa16.98■□□□□ 0.31
CUEDC1-201ENST00000360238 ETDCA0A1B0GVM5 59 aa16.96■□□□□ 0.31
CUEDC1-201ENST00000360238 Q8N377 158 aa16.96■□□□□ 0.31
CUEDC1-201ENST00000360238 BCE1O60756 84 aa16.95■□□□□ 0.3
CUEDC1-201ENST00000360238 MRPL55Q7Z7F7 128 aaKnown RBP16.95■□□□□ 0.3
CUEDC1-201ENST00000360238 Q9BRP9 147 aa16.94■□□□□ 0.3
CUEDC1-201ENST00000360238 IGLV5-48A0A075B6I7 105 aa16.92■□□□□ 0.3
CUEDC1-201ENST00000360238 FAM19A5Q7Z5A7 132 aaPredicted RBP16.92■□□□□ 0.3
CUEDC1-201ENST00000360238 DEFB105AQ8NG35 78 aa16.92■□□□□ 0.3
CUEDC1-201ENST00000360238 KRTAP1-5Q9BYS1 174 aa16.88■□□□□ 0.29
CUEDC1-201ENST00000360238 CYSTM1Q9H1C7 97 aa16.87■□□□□ 0.29
CUEDC1-201ENST00000360238 MGAM2Q2M2H8 2515 aa16.85■□□□□ 0.29
CUEDC1-201ENST00000360238 CNBPP62633 177 aaKnown RBP16.85■□□□□ 0.29
CUEDC1-201ENST00000360238 SMIM20Q8N5G0 67 aa16.85■□□□□ 0.29
CUEDC1-201ENST00000360238 SCXQ7RTU7 201 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 A0A1B0GW54 56 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 TNP2Q05952 138 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 REG3GQ6UW15 175 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 UBE2DNLQ8IWF7 75 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 APLNQ9ULZ1 77 aa16.82■□□□□ 0.28
CUEDC1-201ENST00000360238 TRAV7A0A075B6U4 112 aa16.81■□□□□ 0.28
CUEDC1-201ENST00000360238 C16orf90A8MZG2 172 aa16.81■□□□□ 0.28
CUEDC1-201ENST00000360238 TMEM258P61165 79 aa16.8■□□□□ 0.28
CUEDC1-201ENST00000360238 PSCAO43653 123 aa16.79■□□□□ 0.28
CUEDC1-201ENST00000360238 NREPQ16612 68 aa16.79■□□□□ 0.28
CUEDC1-201ENST00000360238 ST20-AS1Q8NBB2 130 aa16.79■□□□□ 0.28
CUEDC1-201ENST00000360238 STAB2Q8WWQ8 2551 aa16.79■□□□□ 0.28
CUEDC1-201ENST00000360238 A0A096LNI7 61 aa16.78■□□□□ 0.28
CUEDC1-201ENST00000360238 UBE2BP63146 152 aa16.78■□□□□ 0.28
CUEDC1-201ENST00000360238 FUSP35637 526 aaKnown RBP eCLIP16.77■□□□□ 0.28
CUEDC1-201ENST00000360238 COL7A1Q02388 2944 aa16.76■□□□□ 0.27
CUEDC1-201ENST00000360238 ERC2-IT1O76042 136 aa16.76■□□□□ 0.27
CUEDC1-201ENST00000360238 DNAH9Q9NYC9 4486 aa16.76■□□□□ 0.27
CUEDC1-201ENST00000360238 C3orf84H3BNL1 204 aa16.75■□□□□ 0.27
CUEDC1-201ENST00000360238 C14orf177Q52M58 125 aa16.75■□□□□ 0.27
CUEDC1-201ENST00000360238 C1orf137Q5JT78 98 aa16.74■□□□□ 0.27
CUEDC1-201ENST00000360238 B9D2Q9BPU9 175 aa16.74■□□□□ 0.27
CUEDC1-201ENST00000360238 DYNC2H1Q8NCM8 4307 aaKnown RBP16.74■□□□□ 0.27
CUEDC1-201ENST00000360238 A0A1W2PNM2 257 aa16.71■□□□□ 0.27
CUEDC1-201ENST00000360238 IGKV2-24A0A0C4DH68 120 aa16.71■□□□□ 0.27
CUEDC1-201ENST00000360238 LYSTQ99698 3801 aa16.7■□□□□ 0.26
CUEDC1-201ENST00000360238 C20orf197Q8N268 126 aa16.7■□□□□ 0.26
CUEDC1-201ENST00000360238 Q8NBF4 154 aa16.7■□□□□ 0.26
CUEDC1-201ENST00000360238 DNAH10Q8IVF4 4471 aa16.7■□□□□ 0.26
CUEDC1-201ENST00000360238 IGKV4-1P06312 121 aa16.7■□□□□ 0.26
CUEDC1-201ENST00000360238 BPY2O14599 106 aa16.69■□□□□ 0.26
CUEDC1-201ENST00000360238 A0A1W2PNN7 141 aa16.68■□□□□ 0.26
CUEDC1-201ENST00000360238 SPRR4Q96PI1 79 aa16.67■□□□□ 0.26
CUEDC1-201ENST00000360238 J3KT08 172 aa16.65■□□□□ 0.26
CUEDC1-201ENST00000360238 SMIM29Q86T20 159 aa16.64■□□□□ 0.25
CUEDC1-201ENST00000360238 Q8N9L7 120 aa16.64■□□□□ 0.25
CUEDC1-201ENST00000360238 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.63■□□□□ 0.25
CUEDC1-201ENST00000360238 RPS28P62857 69 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-201ENST00000360238 KLKP1Q107X0 134 aa16.61■□□□□ 0.25
CUEDC1-201ENST00000360238 MDFIQ99750 246 aa16.61■□□□□ 0.25
CUEDC1-201ENST00000360238 F8WEM9 126 aa16.6■□□□□ 0.25
CUEDC1-201ENST00000360238 PKIGQ9Y2B9 76 aa16.6■□□□□ 0.25
CUEDC1-201ENST00000360238 PRLHP81277 87 aa16.59■□□□□ 0.25
CUEDC1-201ENST00000360238 NUPR2A6NF83 97 aa16.58■□□□□ 0.25
CUEDC1-201ENST00000360238 NBDYA0A0U1RRE5 68 aa16.57■□□□□ 0.24
CUEDC1-201ENST00000360238 LINC00476Q8WZB0 136 aa16.57■□□□□ 0.24
CUEDC1-201ENST00000360238 DPH3Q96FX2 82 aa16.57■□□□□ 0.24
CUEDC1-201ENST00000360238 LRCOL1A6NCL2 159 aa16.55■□□□□ 0.24
CUEDC1-201ENST00000360238 C9orf163Q8N9P6 203 aa16.55■□□□□ 0.24
CUEDC1-201ENST00000360238 CHTF8P0CG12 524 aa16.54■□□□□ 0.24
CUEDC1-201ENST00000360238 CSMD3Q7Z407 3707 aa16.52■□□□□ 0.24
CUEDC1-201ENST00000360238 IGLV8-61A0A075B6I0 122 aa16.52■□□□□ 0.24
CUEDC1-201ENST00000360238 H7BZZ5 65 aa16.52■□□□□ 0.24
CUEDC1-201ENST00000360238 HIGD2AQ9BW72 106 aa16.52■□□□□ 0.24
CUEDC1-201ENST00000360238 H0Y9J4 135 aa16.51■□□□□ 0.23
CUEDC1-201ENST00000360238 PHF5AQ7RTV0 110 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-201ENST00000360238 IGFL1Q6UW32 110 aa16.49■□□□□ 0.23
CUEDC1-201ENST00000360238 Q6ZRN7 208 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-201ENST00000360238 DNAH7Q8WXX0 4024 aa16.49■□□□□ 0.23
CUEDC1-201ENST00000360238 OCR1Q9BZK8 76 aa16.48■□□□□ 0.23
CUEDC1-201ENST00000360238 LINC00474Q9P2X8 69 aa16.48■□□□□ 0.23
CUEDC1-201ENST00000360238 KRTAP11-1Q8IUC1 163 aa16.47■□□□□ 0.23
CUEDC1-201ENST00000360238 SNURFQ9Y675 71 aa16.47■□□□□ 0.23
CUEDC1-201ENST00000360238 PLECQ15149 4684 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms