RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 DPH3Q96FX2 82 aa13.25□□□□□ -0.29
BRD4-202ENST00000360016 M0R378 163 aa13.24□□□□□ -0.29
BRD4-202ENST00000360016 CCKP06307 115 aa13.24□□□□□ -0.29
BRD4-202ENST00000360016 TMEM256-PLSCR3K7ERE1 68 aa13.23□□□□□ -0.29
BRD4-202ENST00000360016 DNAH1Q9P2D7 4330 aa13.22□□□□□ -0.29
BRD4-202ENST00000360016 DIRC1Q969H9 104 aa13.22□□□□□ -0.29
BRD4-202ENST00000360016 B9D2Q9BPU9 175 aa13.22□□□□□ -0.29
BRD4-202ENST00000360016 RBM3P98179 157 aaKnown RBP13.21□□□□□ -0.29
BRD4-202ENST00000360016 Q6JHZ5 121 aa13.21□□□□□ -0.29
BRD4-202ENST00000360016 ZNF73O43830 326 aaPredicted RBP13.21□□□□□ -0.29
BRD4-202ENST00000360016 DNAH9Q9NYC9 4486 aa13.21□□□□□ -0.3
BRD4-202ENST00000360016 COL7A1Q02388 2944 aa13.21□□□□□ -0.3
BRD4-202ENST00000360016 CRYGAP11844 174 aa13.2□□□□□ -0.3
BRD4-202ENST00000360016 TLX1NBP0CAT3 122 aa13.18□□□□□ -0.3
BRD4-202ENST00000360016 C3orf84H3BNL1 204 aa13.17□□□□□ -0.3
BRD4-202ENST00000360016 JMJD7-PLA2G4BH0Y9G9 81 aa13.16□□□□□ -0.3
BRD4-202ENST00000360016 COX7BP24311 80 aa13.16□□□□□ -0.3
BRD4-202ENST00000360016 TRBV7-6A0A0J9YX20 115 aa13.16□□□□□ -0.3
BRD4-202ENST00000360016 APLNQ9ULZ1 77 aa13.15□□□□□ -0.3
BRD4-202ENST00000360016 STAB2Q8WWQ8 2551 aa13.15□□□□□ -0.3
BRD4-202ENST00000360016 ELOF1P60002 83 aaKnown RBP13.15□□□□□ -0.3
BRD4-202ENST00000360016 LRCOL1A6NCL2 159 aa13.15□□□□□ -0.31
BRD4-202ENST00000360016 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
BRD4-202ENST00000360016 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
BRD4-202ENST00000360016 KRTAP1-5Q9BYS1 174 aa13.13□□□□□ -0.31
BRD4-202ENST00000360016 NKAPP1Q8N9T2 125 aa13.12□□□□□ -0.31
BRD4-202ENST00000360016 UBE2DNLQ8IWF7 75 aa13.11□□□□□ -0.31
BRD4-202ENST00000360016 TMEM258P61165 79 aa13.11□□□□□ -0.31
BRD4-202ENST00000360016 MPLKIPQ8TAP9 179 aa13.11□□□□□ -0.31
BRD4-202ENST00000360016 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
BRD4-202ENST00000360016 LINC01547P58512 204 aaPredicted RBP13.09□□□□□ -0.31
BRD4-202ENST00000360016 F8WEM9 126 aa13.09□□□□□ -0.31
BRD4-202ENST00000360016 Q6ZVQ6 151 aa13.09□□□□□ -0.31
BRD4-202ENST00000360016 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
BRD4-202ENST00000360016 Q5XG85 94 aa13.08□□□□□ -0.32
BRD4-202ENST00000360016 SRRM2Q9UQ35 2752 aaKnown RBP13.08□□□□□ -0.32
BRD4-202ENST00000360016 H3BQ85 93 aa13.07□□□□□ -0.32
BRD4-202ENST00000360016 RPS28P62857 69 aaKnown RBP13.07□□□□□ -0.32
BRD4-202ENST00000360016 DYNC2H1Q8NCM8 4307 aaKnown RBP13.07□□□□□ -0.32
BRD4-202ENST00000360016 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
BRD4-202ENST00000360016 KCNQ1DNQ9H478 68 aa13.07□□□□□ -0.32
BRD4-202ENST00000360016 PRR4Q16378 134 aa13.06□□□□□ -0.32
BRD4-202ENST00000360016 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
BRD4-202ENST00000360016 LYSTQ99698 3801 aa13.06□□□□□ -0.32
BRD4-202ENST00000360016 BPY2O14599 106 aa13.05□□□□□ -0.32
BRD4-202ENST00000360016 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
BRD4-202ENST00000360016 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
BRD4-202ENST00000360016 FAM236DA0A1B0GTK5 79 aa13.04□□□□□ -0.32
BRD4-202ENST00000360016 FAM236CP0DP71 79 aa13.04□□□□□ -0.32
BRD4-202ENST00000360016 IGLV5-37A0A075B6J1 123 aa13.04□□□□□ -0.32
BRD4-202ENST00000360016 A0A0G2JQZ4 141 aa13.03□□□□□ -0.32
BRD4-202ENST00000360016 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
BRD4-202ENST00000360016 PSCAO43653 123 aa13.02□□□□□ -0.33
BRD4-202ENST00000360016 RPL37AP8A6NKH3 93 aa13.01□□□□□ -0.33
BRD4-202ENST00000360016 Q6ZQT0 140 aa13.01□□□□□ -0.33
BRD4-202ENST00000360016 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
BRD4-202ENST00000360016 KRTAP7-1Q8IUC3 87 aa13.01□□□□□ -0.33
BRD4-202ENST00000360016 NUPR2A6NF83 97 aa13□□□□□ -0.33
BRD4-202ENST00000360016 LOC110117498A0A087WWA1 95 aa12.99□□□□□ -0.33
BRD4-202ENST00000360016 IGLV1-50A0A075B6I6 118 aa12.98□□□□□ -0.33
BRD4-202ENST00000360016 TENM2Q9NT68 2774 aa12.97□□□□□ -0.33
BRD4-202ENST00000360016 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
BRD4-202ENST00000360016 DNAH10Q8IVF4 4471 aa12.97□□□□□ -0.33
BRD4-202ENST00000360016 DEFB116Q30KQ4 102 aa12.96□□□□□ -0.33
BRD4-202ENST00000360016 PRYO14603 147 aa12.96□□□□□ -0.33
BRD4-202ENST00000360016 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
BRD4-202ENST00000360016 KRTAP4-16G5E9R7 235 aaPredicted RBP12.93□□□□□ -0.34
BRD4-202ENST00000360016 DNAH7Q8WXX0 4024 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 SPRR1AP35321 89 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 PDE6GP18545 87 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 FAM30AQ9NZY2 134 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 H7BZZ5 65 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 C14orf177Q52M58 125 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 BRK1Q8WUW1 75 aa12.92□□□□□ -0.34
BRD4-202ENST00000360016 PLECQ15149 4684 aaKnown RBP12.91□□□□□ -0.34
BRD4-202ENST00000360016 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
BRD4-202ENST00000360016 Q6ZRX8 168 aa12.91□□□□□ -0.34
BRD4-202ENST00000360016 A0A096LNI7 61 aa12.91□□□□□ -0.34
BRD4-202ENST00000360016 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
BRD4-202ENST00000360016 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.9□□□□□ -0.34
BRD4-202ENST00000360016 ETDCA0A1B0GVM5 59 aa12.9□□□□□ -0.34
BRD4-202ENST00000360016 TRBV7-4A0A0J9YYF1 115 aa12.89□□□□□ -0.35
BRD4-202ENST00000360016 DHRS4-AS1Q9P1J3 65 aa12.89□□□□□ -0.35
BRD4-202ENST00000360016 NREPQ16612 68 aa12.88□□□□□ -0.35
BRD4-202ENST00000360016 IGKV2-24A0A0C4DH68 120 aa12.88□□□□□ -0.35
BRD4-202ENST00000360016 Q9BRP9 147 aa12.88□□□□□ -0.35
BRD4-202ENST00000360016 HIGD2AQ9BW72 106 aa12.86□□□□□ -0.35
BRD4-202ENST00000360016 PRKDCP78527 4128 aaKnown RBP12.85□□□□□ -0.35
BRD4-202ENST00000360016 TRAV7A0A075B6U4 112 aa12.84□□□□□ -0.35
BRD4-202ENST00000360016 Q8N377 158 aa12.84□□□□□ -0.35
BRD4-202ENST00000360016 REG3GQ6UW15 175 aa12.83□□□□□ -0.36
BRD4-202ENST00000360016 Q6ZRN7 208 aaPredicted RBP12.83□□□□□ -0.36
BRD4-202ENST00000360016 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
BRD4-202ENST00000360016 PRO0628Q9UI54 55 aa12.82□□□□□ -0.36
BRD4-202ENST00000360016 FAM229BQ4G0N7 80 aa12.82□□□□□ -0.36
BRD4-202ENST00000360016 ST20-AS1Q8NBB2 130 aa12.81□□□□□ -0.36
BRD4-202ENST00000360016 STARD9Q9P2P6 4700 aa12.79□□□□□ -0.36
BRD4-202ENST00000360016 C9orf163Q8N9P6 203 aa12.79□□□□□ -0.36
BRD4-202ENST00000360016 MEGF8Q7Z7M0 2845 aa12.79□□□□□ -0.36
BRD4-202ENST00000360016 TMEM254Q8TBM7 123 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms