RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SERTAD4-AS1Q5TG53 156 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 CHCHD10Q8WYQ3 142 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-202ENST00000359366 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 NDUFA1O15239 70 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 TRIAP1O43715 76 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 KRTAP21-3Q3LHN1 58 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 LELP1Q5T871 98 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
ATXN3-202ENST00000359366 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 SS18Q15532 418 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 A0A087WZ39 114 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-202ENST00000359366 ENHOQ6UWT2 76 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 SOSTDC1Q6X4U4 206 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 C20orf197Q8N268 126 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 C6orf223Q8N319 242 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 PLA2G2DQ9UNK4 145 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 STARD9Q9P2P6 4700 aa3.44□□□□□ -1.86
ATXN3-202ENST00000359366 PLECQ15149 4684 aaKnown RBP3.43□□□□□ -1.86
ATXN3-202ENST00000359366 MIAQ16674 131 aa3.43□□□□□ -1.86
ATXN3-202ENST00000359366 DNAL4O96015 105 aa3.43□□□□□ -1.86
ATXN3-202ENST00000359366 Q9HAA7 133 aa3.43□□□□□ -1.86
ATXN3-202ENST00000359366 LINC00158P58513 81 aa3.42□□□□□ -1.86
ATXN3-202ENST00000359366 COX7A2LO14548 114 aa3.42□□□□□ -1.86
ATXN3-202ENST00000359366 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
ATXN3-202ENST00000359366 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
ATXN3-202ENST00000359366 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
ATXN3-202ENST00000359366 CRPP02741 224 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 UBE2BP63146 152 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 Q1T7F1 81 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 Q6ZVQ6 151 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 PHF5AQ7RTV0 110 aaKnown RBP3.41□□□□□ -1.86
ATXN3-202ENST00000359366 LINC00588Q9Y4M8 146 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 TRAV10A0A0B4J240 114 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 PRR3P79522 188 aaKnown RBP3.41□□□□□ -1.86
ATXN3-202ENST00000359366 CIRBPQ14011 172 aaKnown RBP3.41□□□□□ -1.86
ATXN3-202ENST00000359366 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 LINC00474Q9P2X8 69 aa3.41□□□□□ -1.86
ATXN3-202ENST00000359366 M0R378 163 aa3.4□□□□□ -1.86
ATXN3-202ENST00000359366 KIAA0087Q14695 138 aa3.4□□□□□ -1.86
ATXN3-202ENST00000359366 PRR34Q9NV39 138 aa3.4□□□□□ -1.86
ATXN3-202ENST00000359366 KMT2AQ03164 3969 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 H3BNG1 76 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 SPAG11BQ08648 103 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 CASC10Q5T4H9 136 aa3.4□□□□□ -1.87
ATXN3-202ENST00000359366 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.87
ATXN3-202ENST00000359366 F8WEM9 126 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 LECT2O14960 151 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 CCL18P55774 89 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 Q8IZM0 81 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
ATXN3-202ENST00000359366 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 BAALC-AS2P0C853 105 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 LINC00337Q8N6G1 96 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 Q8NDZ9 215 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 B9D2Q9BPU9 175 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 ZNF73O43830 326 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-202ENST00000359366 MPLKIPQ8TAP9 179 aa3.38□□□□□ -1.87
ATXN3-202ENST00000359366 IGKV3D-7A0A0C4DH55 119 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 LINC01556Q5JQF7 62 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 XAGE1AQ9HD64 81 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 A0A087WVE0 104 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 TMEM256-PLSCR3K7ERE1 68 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 LCA10Q71F78 164 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 OBSCN-AS1Q96MR7 158 aa3.37□□□□□ -1.87
ATXN3-202ENST00000359366 NCR3O14931 201 aa3.36□□□□□ -1.87
ATXN3-202ENST00000359366 ATP11AUNQ6ZP68 121 aa3.36□□□□□ -1.87
ATXN3-202ENST00000359366 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
ATXN3-202ENST00000359366 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
ATXN3-202ENST00000359366 CXCL6P80162 114 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 UBE2DNLQ8IWF7 75 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 CAMK2N2Q96S95 79 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 LINC00846Q9NV44 126 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 TRAV23DV6A0A075B6W5 121 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
ATXN3-202ENST00000359366 FAM218AQ96MZ4 157 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 APLNQ9ULZ1 77 aa3.35□□□□□ -1.87
ATXN3-202ENST00000359366 SLPIP03973 132 aa3.34□□□□□ -1.87
ATXN3-202ENST00000359366 UBE2AP49459 152 aa3.34□□□□□ -1.87
ATXN3-202ENST00000359366 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
ATXN3-202ENST00000359366 SMIM11BQ8TCY0 68 aa3.34□□□□□ -1.87
ATXN3-202ENST00000359366 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
ATXN3-202ENST00000359366 M0R2N4 97 aa3.34□□□□□ -1.88
ATXN3-202ENST00000359366 FUSP35637 526 aaKnown RBP eCLIP3.34□□□□□ -1.88
ATXN3-202ENST00000359366 UBL5Q9BZL1 73 aa3.34□□□□□ -1.88
ATXN3-202ENST00000359366 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
ATXN3-202ENST00000359366 SRRM2Q9UQ35 2752 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms