RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
NLRC3-202ENST00000359128 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
NLRC3-202ENST00000359128 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
NLRC3-202ENST00000359128 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
NLRC3-202ENST00000359128 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
NLRC3-202ENST00000359128 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
NLRC3-202ENST00000359128 C2CD3Q4AC94 2353 aa8.48□□□□□ -1.05
NLRC3-202ENST00000359128 LITAFQ99732 161 aa8.47□□□□□ -1.05
NLRC3-202ENST00000359128 COA5Q86WW8 74 aa8.46□□□□□ -1.05
NLRC3-202ENST00000359128 A0A1W2PNN7 141 aa8.46□□□□□ -1.06
NLRC3-202ENST00000359128 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
NLRC3-202ENST00000359128 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
NLRC3-202ENST00000359128 PRR15Q8IV56 129 aa8.45□□□□□ -1.06
NLRC3-202ENST00000359128 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
NLRC3-202ENST00000359128 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
NLRC3-202ENST00000359128 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
NLRC3-202ENST00000359128 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
NLRC3-202ENST00000359128 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
NLRC3-202ENST00000359128 Q8N377 158 aa8.42□□□□□ -1.06
NLRC3-202ENST00000359128 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
NLRC3-202ENST00000359128 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
NLRC3-202ENST00000359128 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
NLRC3-202ENST00000359128 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
NLRC3-202ENST00000359128 A0A0G2JQZ4 141 aa8.4□□□□□ -1.06
NLRC3-202ENST00000359128 Q6ZSA8 131 aa8.4□□□□□ -1.06
NLRC3-202ENST00000359128 UTRNP46939 3433 aa8.4□□□□□ -1.07
NLRC3-202ENST00000359128 UQCR11O14957 56 aa8.4□□□□□ -1.07
NLRC3-202ENST00000359128 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
NLRC3-202ENST00000359128 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
NLRC3-202ENST00000359128 TNP2Q05952 138 aa8.38□□□□□ -1.07
NLRC3-202ENST00000359128 M0R2T5 61 aa8.38□□□□□ -1.07
NLRC3-202ENST00000359128 MTORP42345 2549 aa8.38□□□□□ -1.07
NLRC3-202ENST00000359128 ERC2-IT1O76042 136 aa8.36□□□□□ -1.07
NLRC3-202ENST00000359128 POLQO75417 2590 aa8.36□□□□□ -1.07
NLRC3-202ENST00000359128 FLNBO75369 2602 aaKnown RBP8.35□□□□□ -1.07
NLRC3-202ENST00000359128 PRO0628Q9UI54 55 aa8.35□□□□□ -1.07
NLRC3-202ENST00000359128 CENPFP49454 3210 aa8.35□□□□□ -1.07
NLRC3-202ENST00000359128 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
NLRC3-202ENST00000359128 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
NLRC3-202ENST00000359128 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
NLRC3-202ENST00000359128 IGLV5-48A0A075B6I7 105 aa8.31□□□□□ -1.08
NLRC3-202ENST00000359128 A0A0D9SG42 100 aa8.3□□□□□ -1.08
NLRC3-202ENST00000359128 Q8N1X5 172 aa8.3□□□□□ -1.08
NLRC3-202ENST00000359128 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
NLRC3-202ENST00000359128 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
NLRC3-202ENST00000359128 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
NLRC3-202ENST00000359128 A8MUN3 132 aa8.26□□□□□ -1.09
NLRC3-202ENST00000359128 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
NLRC3-202ENST00000359128 CD164Q04900 197 aa8.25□□□□□ -1.09
NLRC3-202ENST00000359128 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
NLRC3-202ENST00000359128 ACANP16112 2415 aa8.25□□□□□ -1.09
NLRC3-202ENST00000359128 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
NLRC3-202ENST00000359128 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.09
NLRC3-202ENST00000359128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.21□□□□□ -1.09
NLRC3-202ENST00000359128 F8P00451 2351 aa8.2□□□□□ -1.1
NLRC3-202ENST00000359128 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
NLRC3-202ENST00000359128 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
NLRC3-202ENST00000359128 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
NLRC3-202ENST00000359128 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
NLRC3-202ENST00000359128 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
NLRC3-202ENST00000359128 Q5VSD8 79 aa8.12□□□□□ -1.11
NLRC3-202ENST00000359128 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
NLRC3-202ENST00000359128 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
NLRC3-202ENST00000359128 S4R3F8 94 aa8.1□□□□□ -1.11
NLRC3-202ENST00000359128 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
NLRC3-202ENST00000359128 HRES1P13985 223 aa8.09□□□□□ -1.11
NLRC3-202ENST00000359128 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
NLRC3-202ENST00000359128 WIPF1O43516 503 aa8.07□□□□□ -1.12
NLRC3-202ENST00000359128 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
NLRC3-202ENST00000359128 LCE6AA0A183 80 aa8.05□□□□□ -1.12
NLRC3-202ENST00000359128 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
NLRC3-202ENST00000359128 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
NLRC3-202ENST00000359128 H7BZZ5 65 aa8.01□□□□□ -1.13
NLRC3-202ENST00000359128 LUZP6Q538Z0 58 aa8.01□□□□□ -1.13
NLRC3-202ENST00000359128 A0A1B0GU33 70 aa7.99□□□□□ -1.13
NLRC3-202ENST00000359128 CR1P17927 2039 aa7.94□□□□□ -1.14
NLRC3-202ENST00000359128 Q1T7F1 81 aa7.94□□□□□ -1.14
NLRC3-202ENST00000359128 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
NLRC3-202ENST00000359128 HELZ2Q9BYK8 2649 aaKnown RBP7.93□□□□□ -1.14
NLRC3-202ENST00000359128 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
NLRC3-202ENST00000359128 OXTP01178 125 aa7.92□□□□□ -1.14
NLRC3-202ENST00000359128 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
NLRC3-202ENST00000359128 PRRC2CQ9Y520 2896 aaKnown RBP7.9□□□□□ -1.14
NLRC3-202ENST00000359128 R4GN34 69 aa7.9□□□□□ -1.15
NLRC3-202ENST00000359128 LCA10Q71F78 164 aa7.89□□□□□ -1.15
NLRC3-202ENST00000359128 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
NLRC3-202ENST00000359128 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
NLRC3-202ENST00000359128 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
NLRC3-202ENST00000359128 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
NLRC3-202ENST00000359128 SPINK7P58062 85 aa7.88□□□□□ -1.15
NLRC3-202ENST00000359128 MAST4O15021 2626 aa7.86□□□□□ -1.15
NLRC3-202ENST00000359128 C5orf42Q9H799 3197 aa7.86□□□□□ -1.15
NLRC3-202ENST00000359128 USP24Q9UPU5 2620 aa7.85□□□□□ -1.15
NLRC3-202ENST00000359128 SPRR1AP35321 89 aa7.85□□□□□ -1.15
NLRC3-202ENST00000359128 Q5W150 140 aa7.85□□□□□ -1.15
NLRC3-202ENST00000359128 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
NLRC3-202ENST00000359128 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
NLRC3-202ENST00000359128 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
NLRC3-202ENST00000359128 PCNTO95613 3336 aa7.82□□□□□ -1.16
NLRC3-202ENST00000359128 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms