RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 A0A0J9YWU9 116 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 ZNF355PQ9NSJ1 428 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 TRAV13-1A0A0B4J241 112 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 DEFB108AA8MXU0 73 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 C15orf32Q32M92 178 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 LINC00305Q7Z4B0 112 aa0.86□□□□□ -2.27
SMARCAD1-202ENST00000359052 NEBP20929 6669 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 IGLV11-55A0A075B6I3 123 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 D6R8Y8 96 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 BAALC-AS2P0C853 105 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 NCOR2Q9Y618 2525 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 TRAV40A0A0B4J280 105 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 M0R2Z0 102 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 KRTDAPP60985 99 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 C7orf65Q6ZTY9 151 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 NXT2Q9NPJ8 142 aaKnown RBP0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 TMEM167BQ9NRX6 74 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 KAAG1Q9UBP8 84 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 LUZP6Q538Z0 58 aa0.85□□□□□ -2.27
SMARCAD1-202ENST00000359052 A0A087WVE0 104 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 GVQW2A0A096LPI5 108 aaPredicted RBP0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 TRBV6-8A0A0A6YYG3 113 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 KNCNA6PVL3 124 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 A8MWV9 139 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 H3BMM0 161 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 KMT2DO14686 5537 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 UBE2WQ96B02 151 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 ACACBO00763 2458 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 PIGBOS1A0A0B4J2F0 54 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 A0A1B0GUT8 65 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 IGHV3-53P01767 116 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 SPRR1BP22528 89 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 VMA21Q3ZAQ7 101 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 ABCA11PQ4W5N1 156 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 FAM74A4Q5TZK3 123 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 MUSTN1Q8IVN3 82 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 PTPRQQ9UMZ3 2332 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 LINC00308Q8TCZ7 52 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 NHP2Q9NX24 153 aaKnown RBP0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 PSENENQ9NZ42 101 aa0.84□□□□□ -2.27
SMARCAD1-202ENST00000359052 S100GP29377 79 aa0.84□□□□□ -2.28
SMARCAD1-202ENST00000359052 FXYD3Q14802 87 aa0.84□□□□□ -2.28
SMARCAD1-202ENST00000359052 UBALD1Q8TB05 177 aa0.84□□□□□ -2.28
SMARCAD1-202ENST00000359052 LCE3DQ9BYE3 92 aa0.84□□□□□ -2.28
SMARCAD1-202ENST00000359052 SMIM3Q9BZL3 60 aa0.84□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGKV2D-24A0A075B6R9 120 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 K7EIL1 84 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 BRD3OSQ6XYD6 125 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP4-3Q9BYR4 195 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 FN1P02751 2386 aaKnown RBP0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 RIIAD1A6NNX1 92 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 PIRTP0C851 137 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 CSN1S1P47710 185 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 BSPH1Q075Z2 132 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 MIR7-3HGQ8N6C7 128 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 RAB37Q96AX2 223 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 KLK12Q9UKR0 248 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 BATFQ16520 125 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 C9orf116Q5BN46 136 aaPredicted RBP0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 Q6ZRN7 208 aaPredicted RBP0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 TMEM141Q96I45 108 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 FLNAP21333 2647 aaKnown RBP0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 COX6A2Q02221 97 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 RMI2Q96E14 147 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGHV1-3A0A0C4DH29 117 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 MGST1P10620 155 aaKnown RBP0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 TMEM30CPA0ZSE6 113 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 CEP250Q9BV73 2442 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 H3BP45 60 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 GNGT2O14610 69 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 SPINK7P58062 85 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 ATXN8Q156A1 80 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 TTC28Q96AY4 2481 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 DMAC1Q96GE9 116 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 CAMK2N2Q96S95 79 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 H0YAA0 97 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 CLPSL2Q6UWE3 100 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 MRPL55Q7Z7F7 128 aaKnown RBP0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 Q8N9L7 120 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 TMEM254Q8TBM7 123 aa0.82□□□□□ -2.28
SMARCAD1-202ENST00000359052 TRBV6-4A0A1B0GX49 114 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 MT3P25713 68 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 Q6ZTI0 123 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 R4GN34 69 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 DOPEY2Q9Y3R5 2298 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 ATRQ13535 2644 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 F5P12259 2224 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 C9orf153Q5TBE3 101 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 LINC00575Q6W349 94 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 HMGN2P46Q86SG4 172 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 PHLDA3Q9Y5J5 127 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 DIDO1Q9BTC0 2240 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms