RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 UNQ6190/PRO20217Q6UXQ8 127 aa8.45□□□□□ -1.06
GGPS1-202ENST00000358966 Q8IZM0 81 aa8.45□□□□□ -1.06
GGPS1-202ENST00000358966 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
GGPS1-202ENST00000358966 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
GGPS1-202ENST00000358966 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
GGPS1-202ENST00000358966 A0A087WYN8 130 aa8.43□□□□□ -1.06
GGPS1-202ENST00000358966 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
GGPS1-202ENST00000358966 CCL18P55774 89 aa8.42□□□□□ -1.06
GGPS1-202ENST00000358966 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
GGPS1-202ENST00000358966 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
GGPS1-202ENST00000358966 B9D2Q9BPU9 175 aa8.42□□□□□ -1.06
GGPS1-202ENST00000358966 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
GGPS1-202ENST00000358966 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
GGPS1-202ENST00000358966 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
GGPS1-202ENST00000358966 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
GGPS1-202ENST00000358966 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
GGPS1-202ENST00000358966 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
GGPS1-202ENST00000358966 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
GGPS1-202ENST00000358966 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
GGPS1-202ENST00000358966 ATP5EP56381 51 aaPredicted RBP8.39□□□□□ -1.07
GGPS1-202ENST00000358966 Q8NDZ9 215 aa8.39□□□□□ -1.07
GGPS1-202ENST00000358966 LECT2O14960 151 aa8.38□□□□□ -1.07
GGPS1-202ENST00000358966 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
GGPS1-202ENST00000358966 C15orf56Q8N910 161 aa8.38□□□□□ -1.07
GGPS1-202ENST00000358966 NDUFC1O43677 76 aa8.38□□□□□ -1.07
GGPS1-202ENST00000358966 DNAH10OSP0CZ25 163 aa8.38□□□□□ -1.07
GGPS1-202ENST00000358966 DYNC2H1Q8NCM8 4307 aaKnown RBP8.37□□□□□ -1.07
GGPS1-202ENST00000358966 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
GGPS1-202ENST00000358966 SLPIP03973 132 aa8.37□□□□□ -1.07
GGPS1-202ENST00000358966 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
GGPS1-202ENST00000358966 BCE1O60756 84 aa8.36□□□□□ -1.07
GGPS1-202ENST00000358966 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
GGPS1-202ENST00000358966 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
GGPS1-202ENST00000358966 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
GGPS1-202ENST00000358966 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
GGPS1-202ENST00000358966 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
GGPS1-202ENST00000358966 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
GGPS1-202ENST00000358966 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
GGPS1-202ENST00000358966 SMIM11BQ8TCY0 68 aa8.32□□□□□ -1.08
GGPS1-202ENST00000358966 APLNQ9ULZ1 77 aa8.31□□□□□ -1.08
GGPS1-202ENST00000358966 ORMDL1Q9P0S3 153 aa8.31□□□□□ -1.08
GGPS1-202ENST00000358966 TRBV7-4A0A0J9YYF1 115 aa8.31□□□□□ -1.08
GGPS1-202ENST00000358966 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
GGPS1-202ENST00000358966 H0YGX0 51 aa8.29□□□□□ -1.08
GGPS1-202ENST00000358966 COX17Q14061 63 aa8.28□□□□□ -1.08
GGPS1-202ENST00000358966 LRCOL1A6NCL2 159 aa8.28□□□□□ -1.08
GGPS1-202ENST00000358966 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
GGPS1-202ENST00000358966 HAMPP81172 84 aa8.27□□□□□ -1.09
GGPS1-202ENST00000358966 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
GGPS1-202ENST00000358966 Q6ZRP5 223 aa8.26□□□□□ -1.09
GGPS1-202ENST00000358966 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
GGPS1-202ENST00000358966 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
GGPS1-202ENST00000358966 JMJD7-PLA2G4BH0Y9G9 81 aa8.25□□□□□ -1.09
GGPS1-202ENST00000358966 PSPHP1O15172 72 aa8.25□□□□□ -1.09
GGPS1-202ENST00000358966 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
GGPS1-202ENST00000358966 A8MU10 97 aa8.24□□□□□ -1.09
GGPS1-202ENST00000358966 M0R2N4 97 aa8.24□□□□□ -1.09
GGPS1-202ENST00000358966 SYCNQ0VAF6 134 aa8.24□□□□□ -1.09
GGPS1-202ENST00000358966 NREPQ16612 68 aa8.23□□□□□ -1.09
GGPS1-202ENST00000358966 DNAH2Q9P225 4427 aa8.23□□□□□ -1.09
GGPS1-202ENST00000358966 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
GGPS1-202ENST00000358966 Q1T7F1 81 aa8.22□□□□□ -1.09
GGPS1-202ENST00000358966 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
GGPS1-202ENST00000358966 NUPR2A6NF83 97 aa8.21□□□□□ -1.1
GGPS1-202ENST00000358966 PRYO14603 147 aa8.21□□□□□ -1.1
GGPS1-202ENST00000358966 FAM168BA1KXE4 195 aa8.2□□□□□ -1.1
GGPS1-202ENST00000358966 PSCAO43653 123 aa8.2□□□□□ -1.1
GGPS1-202ENST00000358966 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
GGPS1-202ENST00000358966 Q6ZVQ6 151 aa8.19□□□□□ -1.1
GGPS1-202ENST00000358966 hDV103S1A0JD37 113 aa8.18□□□□□ -1.1
GGPS1-202ENST00000358966 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
GGPS1-202ENST00000358966 VPREB1P12018 145 aa8.18□□□□□ -1.1
GGPS1-202ENST00000358966 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
GGPS1-202ENST00000358966 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
GGPS1-202ENST00000358966 M0R378 163 aa8.17□□□□□ -1.1
GGPS1-202ENST00000358966 TRAV22A0A0B4J277 110 aa8.16□□□□□ -1.1
GGPS1-202ENST00000358966 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
GGPS1-202ENST00000358966 H3BS24 57 aa8.16□□□□□ -1.1
GGPS1-202ENST00000358966 BPY2O14599 106 aa8.16□□□□□ -1.1
GGPS1-202ENST00000358966 Q6ZQT0 140 aa8.16□□□□□ -1.1
GGPS1-202ENST00000358966 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
GGPS1-202ENST00000358966 ERC2-IT1O76042 136 aa8.15□□□□□ -1.1
GGPS1-202ENST00000358966 IGLV6-57P01721 117 aa8.15□□□□□ -1.11
GGPS1-202ENST00000358966 CXCL6P80162 114 aa8.15□□□□□ -1.11
GGPS1-202ENST00000358966 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
GGPS1-202ENST00000358966 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
GGPS1-202ENST00000358966 Q8N814 137 aa8.14□□□□□ -1.11
GGPS1-202ENST00000358966 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
GGPS1-202ENST00000358966 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
GGPS1-202ENST00000358966 RPL37AP8A6NKH3 93 aa8.12□□□□□ -1.11
GGPS1-202ENST00000358966 A8MUN3 132 aa8.12□□□□□ -1.11
GGPS1-202ENST00000358966 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
GGPS1-202ENST00000358966 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
GGPS1-202ENST00000358966 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
GGPS1-202ENST00000358966 UBE2BP63146 152 aa8.11□□□□□ -1.11
GGPS1-202ENST00000358966 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
GGPS1-202ENST00000358966 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
GGPS1-202ENST00000358966 A0A096LNI7 61 aa8.09□□□□□ -1.11
GGPS1-202ENST00000358966 Q6ZRN7 208 aaPredicted RBP8.09□□□□□ -1.11
GGPS1-202ENST00000358966 SPTSSBQ8NFR3 76 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms