RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TRAV10A0A0B4J240 114 aa8.36□□□□□ -1.07
COL20A1-201ENST00000358894 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
COL20A1-201ENST00000358894 APCP25054 2843 aa8.36□□□□□ -1.07
COL20A1-201ENST00000358894 H0Y9J4 135 aa8.35□□□□□ -1.07
COL20A1-201ENST00000358894 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
COL20A1-201ENST00000358894 SPATA3Q8NHX4 192 aa8.33□□□□□ -1.08
COL20A1-201ENST00000358894 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
COL20A1-201ENST00000358894 UBE2AP49459 152 aa8.33□□□□□ -1.08
COL20A1-201ENST00000358894 TM2D3Q9BRN9 247 aa8.33□□□□□ -1.08
COL20A1-201ENST00000358894 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
COL20A1-201ENST00000358894 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
COL20A1-201ENST00000358894 COL6A5A8TX70 2615 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 LINC00208Q96KT6 92 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 H7BZZ5 65 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 KIAA0087Q14695 138 aa8.3□□□□□ -1.08
COL20A1-201ENST00000358894 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
COL20A1-201ENST00000358894 BCE1O60756 84 aa8.29□□□□□ -1.08
COL20A1-201ENST00000358894 Q5XG85 94 aa8.28□□□□□ -1.08
COL20A1-201ENST00000358894 LINC00612Q8N6U2 182 aa8.28□□□□□ -1.08
COL20A1-201ENST00000358894 NDUFB1O75438 58 aa8.28□□□□□ -1.08
COL20A1-201ENST00000358894 IGKV4-1P06312 121 aa8.27□□□□□ -1.09
COL20A1-201ENST00000358894 CXCL6P80162 114 aa8.26□□□□□ -1.09
COL20A1-201ENST00000358894 DHRS4-AS1Q9P1J3 65 aa8.26□□□□□ -1.09
COL20A1-201ENST00000358894 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
COL20A1-201ENST00000358894 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
COL20A1-201ENST00000358894 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
COL20A1-201ENST00000358894 KRTAP24-1Q3LI83 254 aa8.24□□□□□ -1.09
COL20A1-201ENST00000358894 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
COL20A1-201ENST00000358894 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
COL20A1-201ENST00000358894 SMIM29Q86T20 159 aa8.22□□□□□ -1.09
COL20A1-201ENST00000358894 C7orf33Q8WU49 177 aa8.22□□□□□ -1.09
COL20A1-201ENST00000358894 OXTP01178 125 aa8.21□□□□□ -1.09
COL20A1-201ENST00000358894 SPENQ96T58 3664 aaKnown RBP8.21□□□□□ -1.09
COL20A1-201ENST00000358894 M0R2N4 97 aa8.21□□□□□ -1.1
COL20A1-201ENST00000358894 Q6ZQT0 140 aa8.21□□□□□ -1.1
COL20A1-201ENST00000358894 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
COL20A1-201ENST00000358894 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
COL20A1-201ENST00000358894 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
COL20A1-201ENST00000358894 IGLV6-57P01721 117 aa8.19□□□□□ -1.1
COL20A1-201ENST00000358894 Q6ZRP5 223 aa8.19□□□□□ -1.1
COL20A1-201ENST00000358894 ELOF1P60002 83 aaKnown RBP8.18□□□□□ -1.1
COL20A1-201ENST00000358894 VPREB1P12018 145 aa8.18□□□□□ -1.1
COL20A1-201ENST00000358894 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
COL20A1-201ENST00000358894 CUBNO60494 3623 aa8.18□□□□□ -1.1
COL20A1-201ENST00000358894 H3BNG1 76 aa8.18□□□□□ -1.1
COL20A1-201ENST00000358894 KRTAP10-11P60412 298 aa8.18□□□□□ -1.1
COL20A1-201ENST00000358894 CD164Q04900 197 aa8.17□□□□□ -1.1
COL20A1-201ENST00000358894 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
COL20A1-201ENST00000358894 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
COL20A1-201ENST00000358894 A8MUN3 132 aa8.16□□□□□ -1.1
COL20A1-201ENST00000358894 PRLHP81277 87 aa8.16□□□□□ -1.1
COL20A1-201ENST00000358894 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
COL20A1-201ENST00000358894 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
COL20A1-201ENST00000358894 LINC00588Q9Y4M8 146 aa8.14□□□□□ -1.11
COL20A1-201ENST00000358894 HIVEP1P15822 2718 aa8.13□□□□□ -1.11
COL20A1-201ENST00000358894 A0A087WSZ3 146 aa8.13□□□□□ -1.11
COL20A1-201ENST00000358894 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
COL20A1-201ENST00000358894 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
COL20A1-201ENST00000358894 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
COL20A1-201ENST00000358894 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
COL20A1-201ENST00000358894 NSD1Q96L73 2696 aaPredicted RBP8.12□□□□□ -1.11
COL20A1-201ENST00000358894 SERTAD4-AS1Q5TG53 156 aa8.12□□□□□ -1.11
COL20A1-201ENST00000358894 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
COL20A1-201ENST00000358894 NIPBLQ6KC79 2804 aaeCLIP8.11□□□□□ -1.11
COL20A1-201ENST00000358894 ST20-AS1Q8NBB2 130 aa8.11□□□□□ -1.11
COL20A1-201ENST00000358894 HCG22E2RYF7 251 aa8.1□□□□□ -1.11
COL20A1-201ENST00000358894 Q8NDZ9 215 aa8.1□□□□□ -1.11
COL20A1-201ENST00000358894 SPINK6Q6UWN8 80 aa8.1□□□□□ -1.11
COL20A1-201ENST00000358894 BSNQ9UPA5 3926 aa8.09□□□□□ -1.11
COL20A1-201ENST00000358894 H0Y9P7 68 aa8.09□□□□□ -1.11
COL20A1-201ENST00000358894 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
COL20A1-201ENST00000358894 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
COL20A1-201ENST00000358894 Q6ZRX8 168 aa8.08□□□□□ -1.12
COL20A1-201ENST00000358894 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
COL20A1-201ENST00000358894 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
COL20A1-201ENST00000358894 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
COL20A1-201ENST00000358894 Q9BRP9 147 aa8.07□□□□□ -1.12
COL20A1-201ENST00000358894 TRAV22A0A0B4J277 110 aa8.06□□□□□ -1.12
COL20A1-201ENST00000358894 BAHCC1Q9P281 2608 aa8.06□□□□□ -1.12
COL20A1-201ENST00000358894 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
COL20A1-201ENST00000358894 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
COL20A1-201ENST00000358894 CASC10Q5T4H9 136 aa8.04□□□□□ -1.12
COL20A1-201ENST00000358894 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
COL20A1-201ENST00000358894 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
COL20A1-201ENST00000358894 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
COL20A1-201ENST00000358894 PRR15Q8IV56 129 aa8.02□□□□□ -1.13
COL20A1-201ENST00000358894 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
COL20A1-201ENST00000358894 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
COL20A1-201ENST00000358894 Q8NBF4 154 aa8.01□□□□□ -1.13
COL20A1-201ENST00000358894 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
COL20A1-201ENST00000358894 KTN1-AS1Q86SY8 53 aa8□□□□□ -1.13
COL20A1-201ENST00000358894 K7EIL1 84 aa8□□□□□ -1.13
COL20A1-201ENST00000358894 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
COL20A1-201ENST00000358894 Q8N377 158 aa8□□□□□ -1.13
COL20A1-201ENST00000358894 LINC00476Q8WZB0 136 aa8□□□□□ -1.13
COL20A1-201ENST00000358894 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
COL20A1-201ENST00000358894 A0A0G2JQZ4 141 aa7.99□□□□□ -1.13
COL20A1-201ENST00000358894 A0A1W2PNN7 141 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms