RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
RFX3-202ENST00000358730 FBN1P35555 2871 aaKnown RBP5.6□□□□□ -1.51
RFX3-202ENST00000358730 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
RFX3-202ENST00000358730 CMYA5Q8N3K9 4069 aa5.6□□□□□ -1.51
RFX3-202ENST00000358730 DEFB105AQ8NG35 78 aa5.6□□□□□ -1.51
RFX3-202ENST00000358730 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
RFX3-202ENST00000358730 TRAV10A0A0B4J240 114 aa5.59□□□□□ -1.51
RFX3-202ENST00000358730 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
RFX3-202ENST00000358730 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
RFX3-202ENST00000358730 LINC00588Q9Y4M8 146 aa5.59□□□□□ -1.51
RFX3-202ENST00000358730 BCE1O60756 84 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 MRAPQ8TCY5 172 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 FAM168BA1KXE4 195 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 CASC10Q5T4H9 136 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
RFX3-202ENST00000358730 PRB2P02812 416 aaPredicted RBP5.57□□□□□ -1.52
RFX3-202ENST00000358730 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
RFX3-202ENST00000358730 C3orf84H3BNL1 204 aa5.57□□□□□ -1.52
RFX3-202ENST00000358730 Q6ZRX8 168 aa5.57□□□□□ -1.52
RFX3-202ENST00000358730 Q8N377 158 aa5.57□□□□□ -1.52
RFX3-202ENST00000358730 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
RFX3-202ENST00000358730 FAM19A5Q7Z5A7 132 aaPredicted RBP5.56□□□□□ -1.52
RFX3-202ENST00000358730 DHRS4-AS1Q9P1J3 65 aa5.56□□□□□ -1.52
RFX3-202ENST00000358730 PLA2G2DQ9UNK4 145 aa5.56□□□□□ -1.52
RFX3-202ENST00000358730 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 PRYO14603 147 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 NREPQ16612 68 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 Q8N9L7 120 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 Q9BRP9 147 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 RMI2Q96E14 147 aa5.55□□□□□ -1.52
RFX3-202ENST00000358730 NBEAL1Q6ZS30 2694 aa5.54□□□□□ -1.52
RFX3-202ENST00000358730 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
RFX3-202ENST00000358730 TM2D3Q9BRN9 247 aa5.54□□□□□ -1.52
RFX3-202ENST00000358730 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
RFX3-202ENST00000358730 IGLV5-48A0A075B6I7 105 aa5.54□□□□□ -1.52
RFX3-202ENST00000358730 KRTAP4-16G5E9R7 235 aaPredicted RBP5.54□□□□□ -1.52
RFX3-202ENST00000358730 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 H7BZZ5 65 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 OXTP01178 125 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 IGKV4-1P06312 121 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 SPRR1AP35321 89 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
RFX3-202ENST00000358730 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
RFX3-202ENST00000358730 BPY2O14599 106 aa5.52□□□□□ -1.53
RFX3-202ENST00000358730 FUSP35637 526 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFX3-202ENST00000358730 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
RFX3-202ENST00000358730 UBE2BP63146 152 aa5.51□□□□□ -1.53
RFX3-202ENST00000358730 C1orf137Q5JT78 98 aa5.51□□□□□ -1.53
RFX3-202ENST00000358730 TNP2Q05952 138 aa5.5□□□□□ -1.53
RFX3-202ENST00000358730 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
RFX3-202ENST00000358730 K7EIL1 84 aa5.5□□□□□ -1.53
RFX3-202ENST00000358730 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
RFX3-202ENST00000358730 DNAH1Q9P2D7 4330 aa5.49□□□□□ -1.53
RFX3-202ENST00000358730 F8WEM9 126 aa5.49□□□□□ -1.53
RFX3-202ENST00000358730 REG3GQ6UW15 175 aa5.49□□□□□ -1.53
RFX3-202ENST00000358730 Q8NBF4 154 aa5.49□□□□□ -1.53
RFX3-202ENST00000358730 A0A1B0GW54 56 aa5.48□□□□□ -1.53
RFX3-202ENST00000358730 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
RFX3-202ENST00000358730 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
RFX3-202ENST00000358730 IGKV2-24A0A0C4DH68 120 aa5.47□□□□□ -1.53
RFX3-202ENST00000358730 C4orf48Q5BLP8 95 aa5.47□□□□□ -1.53
RFX3-202ENST00000358730 A0A096LNI7 61 aa5.46□□□□□ -1.53
RFX3-202ENST00000358730 NDUFC1O43677 76 aa5.46□□□□□ -1.53
RFX3-202ENST00000358730 MGAM2Q2M2H8 2515 aa5.46□□□□□ -1.53
RFX3-202ENST00000358730 KRTAP1-5Q9BYS1 174 aa5.46□□□□□ -1.53
RFX3-202ENST00000358730 OCR1Q9BZK8 76 aa5.46□□□□□ -1.53
RFX3-202ENST00000358730 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.54
RFX3-202ENST00000358730 LYSTQ99698 3801 aa5.46□□□□□ -1.54
RFX3-202ENST00000358730 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
RFX3-202ENST00000358730 PSCAO43653 123 aa5.46□□□□□ -1.54
RFX3-202ENST00000358730 SPRR4Q96PI1 79 aa5.46□□□□□ -1.54
RFX3-202ENST00000358730 PRLHP81277 87 aa5.45□□□□□ -1.54
RFX3-202ENST00000358730 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
RFX3-202ENST00000358730 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
RFX3-202ENST00000358730 LINC00476Q8WZB0 136 aa5.44□□□□□ -1.54
RFX3-202ENST00000358730 Q5XG85 94 aa5.44□□□□□ -1.54
RFX3-202ENST00000358730 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
RFX3-202ENST00000358730 A0A1W2PNN7 141 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 UBE2DNLQ8IWF7 75 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
RFX3-202ENST00000358730 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 A0A0G2JQZ4 141 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 C4orf26Q17RF5 130 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
RFX3-202ENST00000358730 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 K7EQZ3 153 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 DSCR10P59022 87 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 FAM30AQ9NZY2 134 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 COL7A1Q02388 2944 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
RFX3-202ENST00000358730 C5orf47Q569G3 176 aa5.42□□□□□ -1.54
RFX3-202ENST00000358730 IGFL1Q6UW32 110 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms