RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SPINK1P00995 79 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 C19orf84I3L1E1 186 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 KIAA0087Q14695 138 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 COA5Q86WW8 74 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 C7orf33Q8WU49 177 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 A0A1B0GU69 56 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 MDFIQ99750 246 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 LCA10Q71F78 164 aa4.2□□□□□ -1.74
VPS13B-203ENST00000358544 C11orf45Q8TAV5 145 aa4.19□□□□□ -1.74
VPS13B-203ENST00000358544 FSHBP01225 129 aa4.19□□□□□ -1.74
VPS13B-203ENST00000358544 C6orf48Q9UBA6 75 aa4.19□□□□□ -1.74
VPS13B-203ENST00000358544 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
VPS13B-203ENST00000358544 CDSNQ15517 529 aa4.18□□□□□ -1.74
VPS13B-203ENST00000358544 ACYP2P14621 99 aa4.18□□□□□ -1.74
VPS13B-203ENST00000358544 Q6ZTC4 211 aa4.17□□□□□ -1.74
VPS13B-203ENST00000358544 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
VPS13B-203ENST00000358544 Q6ZRX8 168 aa4.17□□□□□ -1.74
VPS13B-203ENST00000358544 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
VPS13B-203ENST00000358544 H3BS24 57 aa4.16□□□□□ -1.74
VPS13B-203ENST00000358544 Q1T7F1 81 aa4.16□□□□□ -1.74
VPS13B-203ENST00000358544 TENM4Q6N022 2769 aa4.16□□□□□ -1.74
VPS13B-203ENST00000358544 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
VPS13B-203ENST00000358544 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.74
VPS13B-203ENST00000358544 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.74
VPS13B-203ENST00000358544 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.15□□□□□ -1.75
VPS13B-203ENST00000358544 KLK9Q2XQG4 91 aa4.15□□□□□ -1.75
VPS13B-203ENST00000358544 PRLHP81277 87 aa4.15□□□□□ -1.75
VPS13B-203ENST00000358544 TRBV7-4A0A0J9YYF1 115 aa4.14□□□□□ -1.75
VPS13B-203ENST00000358544 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
VPS13B-203ENST00000358544 IGLV6-57P01721 117 aa4.14□□□□□ -1.75
VPS13B-203ENST00000358544 Q6ZRU5 148 aa4.14□□□□□ -1.75
VPS13B-203ENST00000358544 FBN2P35556 2912 aa4.14□□□□□ -1.75
VPS13B-203ENST00000358544 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
VPS13B-203ENST00000358544 COL4A2P08572 1712 aa4.13□□□□□ -1.75
VPS13B-203ENST00000358544 LYPD5Q6UWN5 251 aa4.13□□□□□ -1.75
VPS13B-203ENST00000358544 AVPP01185 164 aa4.13□□□□□ -1.75
VPS13B-203ENST00000358544 LINC00167Q96N53 147 aa4.12□□□□□ -1.75
VPS13B-203ENST00000358544 PLA2G2AP14555 144 aa4.12□□□□□ -1.75
VPS13B-203ENST00000358544 MOBPQ13875 183 aa4.12□□□□□ -1.75
VPS13B-203ENST00000358544 MXRA5Q9NR99 2828 aa4.11□□□□□ -1.75
VPS13B-203ENST00000358544 A8MWP4 228 aa4.11□□□□□ -1.75
VPS13B-203ENST00000358544 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
VPS13B-203ENST00000358544 ST20-AS1Q8NBB2 130 aa4.11□□□□□ -1.75
VPS13B-203ENST00000358544 K7EQZ3 153 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 UQCR11O14957 56 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 LINC00476Q8WZB0 136 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
VPS13B-203ENST00000358544 OXTP01178 125 aa4.09□□□□□ -1.75
VPS13B-203ENST00000358544 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-203ENST00000358544 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
VPS13B-203ENST00000358544 X6R8D5 127 aa4.09□□□□□ -1.76
VPS13B-203ENST00000358544 VPS13AQ96RL7 3174 aa4.09□□□□□ -1.76
VPS13B-203ENST00000358544 LINC00528Q8N1L1 170 aa4.09□□□□□ -1.76
VPS13B-203ENST00000358544 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
VPS13B-203ENST00000358544 RPL37AP61513 92 aaKnown RBP4.08□□□□□ -1.76
VPS13B-203ENST00000358544 Q75L30 129 aa4.08□□□□□ -1.76
VPS13B-203ENST00000358544 CIRBP-AS1Q8TBR5 109 aa4.08□□□□□ -1.76
VPS13B-203ENST00000358544 LINC01556Q5JQF7 62 aa4.07□□□□□ -1.76
VPS13B-203ENST00000358544 IGLV8-61A0A075B6I0 122 aa4.07□□□□□ -1.76
VPS13B-203ENST00000358544 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
VPS13B-203ENST00000358544 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
VPS13B-203ENST00000358544 SSBP3-AS1Q7Z2R9 100 aa4.07□□□□□ -1.76
VPS13B-203ENST00000358544 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
VPS13B-203ENST00000358544 KCNQ1DNQ9H478 68 aa4.06□□□□□ -1.76
VPS13B-203ENST00000358544 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
VPS13B-203ENST00000358544 M0R2N4 97 aa4.06□□□□□ -1.76
VPS13B-203ENST00000358544 A0A1W2PPR1 153 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 FAM229AH3BQW9 127 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 IGFL1Q6UW32 110 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 OXLD1Q5BKU9 147 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 J3QKU1 62 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
VPS13B-203ENST00000358544 Q5VV11 94 aa4.04□□□□□ -1.76
VPS13B-203ENST00000358544 LINC00588Q9Y4M8 146 aa4.04□□□□□ -1.76
VPS13B-203ENST00000358544 BRCA2P51587 3418 aa4.04□□□□□ -1.76
VPS13B-203ENST00000358544 Q6ZRP5 223 aa4.03□□□□□ -1.76
VPS13B-203ENST00000358544 FAM104AQ969W3 186 aa4.03□□□□□ -1.76
VPS13B-203ENST00000358544 ATMQ13315 3056 aa4.03□□□□□ -1.76
VPS13B-203ENST00000358544 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
VPS13B-203ENST00000358544 H3BNG1 76 aa4.02□□□□□ -1.77
VPS13B-203ENST00000358544 C16orf90A8MZG2 172 aa4.02□□□□□ -1.77
VPS13B-203ENST00000358544 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
VPS13B-203ENST00000358544 A0A1W2PNM2 257 aa4.01□□□□□ -1.77
VPS13B-203ENST00000358544 FREM2Q5SZK8 3169 aa4.01□□□□□ -1.77
VPS13B-203ENST00000358544 A0A096LNT2 108 aa4.01□□□□□ -1.77
VPS13B-203ENST00000358544 LAMA1P25391 3075 aa4□□□□□ -1.77
VPS13B-203ENST00000358544 ZNF575Q86XF7 245 aa4□□□□□ -1.77
VPS13B-203ENST00000358544 Q8N9P0 234 aaPredicted RBP4□□□□□ -1.77
VPS13B-203ENST00000358544 FAM168BA1KXE4 195 aa4□□□□□ -1.77
VPS13B-203ENST00000358544 C16orf95Q9H693 158 aa4□□□□□ -1.77
VPS13B-203ENST00000358544 A0A0G2JQZ4 141 aa3.99□□□□□ -1.77
VPS13B-203ENST00000358544 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
VPS13B-203ENST00000358544 LINC01558Q9Y6Z2 57 aa3.99□□□□□ -1.77
VPS13B-203ENST00000358544 IGLV1-50A0A075B6I6 118 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms