RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PDE6GP18545 87 aa9.42□□□□□ -0.9
NIPAL3-203ENST00000358028 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
NIPAL3-203ENST00000358028 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
NIPAL3-203ENST00000358028 EPPK1P58107 5090 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-203ENST00000358028 M0R378 163 aa9.41□□□□□ -0.9
NIPAL3-203ENST00000358028 VPREB1P12018 145 aa9.41□□□□□ -0.9
NIPAL3-203ENST00000358028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.41□□□□□ -0.9
NIPAL3-203ENST00000358028 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
NIPAL3-203ENST00000358028 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-203ENST00000358028 COX7CP15954 63 aa9.4□□□□□ -0.9
NIPAL3-203ENST00000358028 COX7BP24311 80 aa9.4□□□□□ -0.9
NIPAL3-203ENST00000358028 Q6ZQT0 140 aa9.4□□□□□ -0.9
NIPAL3-203ENST00000358028 UBL5Q9BZL1 73 aa9.4□□□□□ -0.91
NIPAL3-203ENST00000358028 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
NIPAL3-203ENST00000358028 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
NIPAL3-203ENST00000358028 C9orf153Q5TBE3 101 aa9.39□□□□□ -0.91
NIPAL3-203ENST00000358028 Q6ZQY7 126 aa9.39□□□□□ -0.91
NIPAL3-203ENST00000358028 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
NIPAL3-203ENST00000358028 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
NIPAL3-203ENST00000358028 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
NIPAL3-203ENST00000358028 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
NIPAL3-203ENST00000358028 APLNQ9ULZ1 77 aa9.37□□□□□ -0.91
NIPAL3-203ENST00000358028 CRYGAP11844 174 aa9.35□□□□□ -0.91
NIPAL3-203ENST00000358028 LINC00476Q8WZB0 136 aa9.35□□□□□ -0.91
NIPAL3-203ENST00000358028 KMT2AQ03164 3969 aa9.34□□□□□ -0.91
NIPAL3-203ENST00000358028 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
NIPAL3-203ENST00000358028 Q6ZRP5 223 aa9.34□□□□□ -0.91
NIPAL3-203ENST00000358028 SERP2Q8N6R1 65 aa9.34□□□□□ -0.91
NIPAL3-203ENST00000358028 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.92
NIPAL3-203ENST00000358028 LY6G6CO95867 125 aa9.32□□□□□ -0.92
NIPAL3-203ENST00000358028 A0A087WVE0 104 aa9.32□□□□□ -0.92
NIPAL3-203ENST00000358028 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
NIPAL3-203ENST00000358028 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
NIPAL3-203ENST00000358028 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
NIPAL3-203ENST00000358028 RMI2Q96E14 147 aa9.3□□□□□ -0.92
NIPAL3-203ENST00000358028 BCE1O60756 84 aa9.29□□□□□ -0.92
NIPAL3-203ENST00000358028 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
NIPAL3-203ENST00000358028 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
NIPAL3-203ENST00000358028 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
NIPAL3-203ENST00000358028 KCNQ1DNQ9H478 68 aa9.28□□□□□ -0.92
NIPAL3-203ENST00000358028 CXCL6P80162 114 aa9.27□□□□□ -0.92
NIPAL3-203ENST00000358028 Q6ZVQ6 151 aa9.27□□□□□ -0.92
NIPAL3-203ENST00000358028 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
NIPAL3-203ENST00000358028 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.93
NIPAL3-203ENST00000358028 LINC01547P58512 204 aaPredicted RBP9.26□□□□□ -0.93
NIPAL3-203ENST00000358028 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
NIPAL3-203ENST00000358028 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
NIPAL3-203ENST00000358028 IGLV5-37A0A075B6J1 123 aa9.24□□□□□ -0.93
NIPAL3-203ENST00000358028 M0R2N4 97 aa9.24□□□□□ -0.93
NIPAL3-203ENST00000358028 C7orf33Q8WU49 177 aa9.24□□□□□ -0.93
NIPAL3-203ENST00000358028 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
NIPAL3-203ENST00000358028 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
NIPAL3-203ENST00000358028 HAMPP81172 84 aa9.22□□□□□ -0.93
NIPAL3-203ENST00000358028 UBE2DNLQ8IWF7 75 aa9.22□□□□□ -0.93
NIPAL3-203ENST00000358028 PRYO14603 147 aa9.21□□□□□ -0.94
NIPAL3-203ENST00000358028 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
NIPAL3-203ENST00000358028 DNAH2Q9P225 4427 aa9.21□□□□□ -0.94
NIPAL3-203ENST00000358028 TMEM258P61165 79 aa9.19□□□□□ -0.94
NIPAL3-203ENST00000358028 LOC107984640A0A0U1RRK4 108 aa9.18□□□□□ -0.94
NIPAL3-203ENST00000358028 FAM168BA1KXE4 195 aa9.18□□□□□ -0.94
NIPAL3-203ENST00000358028 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
NIPAL3-203ENST00000358028 A0A1B0GW54 56 aa9.17□□□□□ -0.94
NIPAL3-203ENST00000358028 SPRR1AP35321 89 aa9.17□□□□□ -0.94
NIPAL3-203ENST00000358028 Q6ZRX8 168 aa9.17□□□□□ -0.94
NIPAL3-203ENST00000358028 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
NIPAL3-203ENST00000358028 KRTAP1-5Q9BYS1 174 aa9.16□□□□□ -0.94
NIPAL3-203ENST00000358028 IGLV5-48A0A075B6I7 105 aa9.15□□□□□ -0.94
NIPAL3-203ENST00000358028 KRTAP4-16G5E9R7 235 aaPredicted RBP9.15□□□□□ -0.94
NIPAL3-203ENST00000358028 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.94
NIPAL3-203ENST00000358028 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.94
NIPAL3-203ENST00000358028 RPL37AP8A6NKH3 93 aa9.14□□□□□ -0.95
NIPAL3-203ENST00000358028 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
NIPAL3-203ENST00000358028 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
NIPAL3-203ENST00000358028 J3KT08 172 aa9.14□□□□□ -0.95
NIPAL3-203ENST00000358028 Q8N377 158 aa9.14□□□□□ -0.95
NIPAL3-203ENST00000358028 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
NIPAL3-203ENST00000358028 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
NIPAL3-203ENST00000358028 MRPL55Q7Z7F7 128 aaKnown RBP9.12□□□□□ -0.95
NIPAL3-203ENST00000358028 FAT2Q9NYQ8 4349 aa9.11□□□□□ -0.95
NIPAL3-203ENST00000358028 PSCAO43653 123 aa9.1□□□□□ -0.95
NIPAL3-203ENST00000358028 NREPQ16612 68 aa9.1□□□□□ -0.95
NIPAL3-203ENST00000358028 Q6ZR54 194 aa9.1□□□□□ -0.95
NIPAL3-203ENST00000358028 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 DEFB105AQ8NG35 78 aa9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 SVIPQ8NHG7 77 aa9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 Q9BRP9 147 aa9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
NIPAL3-203ENST00000358028 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
NIPAL3-203ENST00000358028 TNP2Q05952 138 aa9.07□□□□□ -0.96
NIPAL3-203ENST00000358028 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
NIPAL3-203ENST00000358028 A0A096LNI7 61 aa9.07□□□□□ -0.96
NIPAL3-203ENST00000358028 SCXQ7RTU7 201 aa9.07□□□□□ -0.96
NIPAL3-203ENST00000358028 C16orf90A8MZG2 172 aa9.06□□□□□ -0.96
NIPAL3-203ENST00000358028 C14orf177Q52M58 125 aa9.06□□□□□ -0.96
NIPAL3-203ENST00000358028 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
NIPAL3-203ENST00000358028 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
NIPAL3-203ENST00000358028 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
NIPAL3-203ENST00000358028 BPY2O14599 106 aa9.04□□□□□ -0.96
NIPAL3-203ENST00000358028 RTL8CO15255 209 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms