RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PRYO14603 147 aa15.59■□□□□ 0.09
SSBP3-202ENST00000357475 RAB37Q96AX2 223 aa15.58■□□□□ 0.09
SSBP3-202ENST00000357475 PCP4L1A6NKN8 68 aa15.58■□□□□ 0.08
SSBP3-202ENST00000357475 FAM229AH3BQW9 127 aa15.58■□□□□ 0.08
SSBP3-202ENST00000357475 SPRR1AP35321 89 aa15.57■□□□□ 0.08
SSBP3-202ENST00000357475 SRRM2Q9UQ35 2752 aaKnown RBP15.56■□□□□ 0.08
SSBP3-202ENST00000357475 KRTAP4-16G5E9R7 235 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-202ENST00000357475 H7C2G1 150 aa15.56■□□□□ 0.08
SSBP3-202ENST00000357475 BCE1O60756 84 aa15.56■□□□□ 0.08
SSBP3-202ENST00000357475 SMIM11BQ8TCY0 68 aa15.56■□□□□ 0.08
SSBP3-202ENST00000357475 A0A1B0GWB2 263 aa15.55■□□□□ 0.08
SSBP3-202ENST00000357475 M0R143 59 aa15.55■□□□□ 0.08
SSBP3-202ENST00000357475 ZNF73O43830 326 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-202ENST00000357475 PRO1854Q9UHT4 67 aa15.53■□□□□ 0.08
SSBP3-202ENST00000357475 IGLV7-43P04211 117 aa15.53■□□□□ 0.08
SSBP3-202ENST00000357475 PRLHP81277 87 aa15.53■□□□□ 0.08
SSBP3-202ENST00000357475 BATFQ16520 125 aa15.53■□□□□ 0.08
SSBP3-202ENST00000357475 KRTAP4-5Q9BYR2 181 aa15.53■□□□□ 0.08
SSBP3-202ENST00000357475 C6orf99Q4VX62 202 aa15.52■□□□□ 0.07
SSBP3-202ENST00000357475 FAM19A1Q7Z5A9 133 aa15.52■□□□□ 0.07
SSBP3-202ENST00000357475 PLA2G1BP04054 148 aaKnown RBP15.51■□□□□ 0.07
SSBP3-202ENST00000357475 PKHD1L1Q86WI1 4243 aa15.5■□□□□ 0.07
SSBP3-202ENST00000357475 KRTAP13-1Q8IUC0 172 aa15.5■□□□□ 0.07
SSBP3-202ENST00000357475 ETDCA0A1B0GVM5 59 aa15.48■□□□□ 0.07
SSBP3-202ENST00000357475 B5MCH6 92 aa15.48■□□□□ 0.07
SSBP3-202ENST00000357475 DIRC1Q969H9 104 aa15.48■□□□□ 0.07
SSBP3-202ENST00000357475 UBE2AP49459 152 aa15.47■□□□□ 0.07
SSBP3-202ENST00000357475 CBY1Q9Y3M2 126 aa15.45■□□□□ 0.06
SSBP3-202ENST00000357475 Q1RN00 199 aa15.44■□□□□ 0.06
SSBP3-202ENST00000357475 SNHG12Q9BXW3 62 aa15.44■□□□□ 0.06
SSBP3-202ENST00000357475 ZNF861PO60384 105 aa15.43■□□□□ 0.06
SSBP3-202ENST00000357475 TSPAN13O95857 204 aa15.43■□□□□ 0.06
SSBP3-202ENST00000357475 RPL28P46779 137 aaKnown RBP15.43■□□□□ 0.06
SSBP3-202ENST00000357475 ABCA13Q86UQ4 5058 aa15.43■□□□□ 0.06
SSBP3-202ENST00000357475 Q6ZRX8 168 aa15.43■□□□□ 0.06
SSBP3-202ENST00000357475 Q9BRP9 147 aa15.42■□□□□ 0.06
SSBP3-202ENST00000357475 ELOF1P60002 83 aaKnown RBP15.41■□□□□ 0.06
SSBP3-202ENST00000357475 COX7BP24311 80 aa15.4■□□□□ 0.06
SSBP3-202ENST00000357475 SMCR5Q8TEV8 140 aa15.39■□□□□ 0.05
SSBP3-202ENST00000357475 HIGD2AQ9BW72 106 aa15.39■□□□□ 0.05
SSBP3-202ENST00000357475 H0Y9J4 135 aa15.38■□□□□ 0.05
SSBP3-202ENST00000357475 TRIAP1O43715 76 aa15.38■□□□□ 0.05
SSBP3-202ENST00000357475 ERC2-IT1O76042 136 aa15.37■□□□□ 0.05
SSBP3-202ENST00000357475 TRBV7-6A0A0J9YX20 115 aa15.36■□□□□ 0.05
SSBP3-202ENST00000357475 NAA38Q9BRA0 125 aaKnown RBP15.36■□□□□ 0.05
SSBP3-202ENST00000357475 SPINK6Q6UWN8 80 aa15.33■□□□□ 0.05
SSBP3-202ENST00000357475 PSMB2P49721 201 aa15.32■□□□□ 0.04
SSBP3-202ENST00000357475 VAMP3Q15836 100 aa15.3■□□□□ 0.04
SSBP3-202ENST00000357475 TAX1BP3O14907 124 aa15.29■□□□□ 0.04
SSBP3-202ENST00000357475 FAM218AQ96MZ4 157 aa15.29■□□□□ 0.04
SSBP3-202ENST00000357475 LINC00575Q6W349 94 aa15.27■□□□□ 0.04
SSBP3-202ENST00000357475 LRP1Q07954 4544 aaKnown RBP15.26■□□□□ 0.03
SSBP3-202ENST00000357475 ST20-AS1Q8NBB2 130 aa15.26■□□□□ 0.03
SSBP3-202ENST00000357475 CLEC2BQ92478 149 aa15.26■□□□□ 0.03
SSBP3-202ENST00000357475 DHRS4-AS1Q9P1J3 65 aa15.26■□□□□ 0.03
SSBP3-202ENST00000357475 INAFM2P0DMQ5 153 aa15.24■□□□□ 0.03
SSBP3-202ENST00000357475 MYCBP2O75592 4640 aa15.24■□□□□ 0.03
SSBP3-202ENST00000357475 FLG2Q5D862 2391 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-202ENST00000357475 FAT3Q8TDW7 4589 aa15.23■□□□□ 0.03
SSBP3-202ENST00000357475 H0YGX0 51 aa15.22■□□□□ 0.03
SSBP3-202ENST00000357475 H3BUT2 72 aa15.22■□□□□ 0.03
SSBP3-202ENST00000357475 ANAPC11Q9NYG5 84 aa15.22■□□□□ 0.03
SSBP3-202ENST00000357475 KRTAP1-4P0C5Y4 121 aa15.21■□□□□ 0.03
SSBP3-202ENST00000357475 COL5A1-AS1Q5SY13 56 aa15.21■□□□□ 0.03
SSBP3-202ENST00000357475 hADV29S1A0JD25 119 aa15.2■□□□□ 0.02
SSBP3-202ENST00000357475 C9orf118A6NHY6 69 aa15.2■□□□□ 0.02
SSBP3-202ENST00000357475 SPRR4Q96PI1 79 aa15.19■□□□□ 0.02
SSBP3-202ENST00000357475 COX6CP09669 75 aa15.18■□□□□ 0.02
SSBP3-202ENST00000357475 SCGB1C2P0DMR2 95 aa15.18■□□□□ 0.02
SSBP3-202ENST00000357475 SLC25A20O43772 301 aa15.17■□□□□ 0.02
SSBP3-202ENST00000357475 PCLOQ9Y6V0 5065 aa15.17■□□□□ 0.02
SSBP3-202ENST00000357475 GAGE2AQ6NT46 116 aa15.15■□□□□ 0.02
SSBP3-202ENST00000357475 Q6ZQY7 126 aa15.14■□□□□ 0.01
SSBP3-202ENST00000357475 LINC01547P58512 204 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-202ENST00000357475 DEFB105AQ8NG35 78 aa15.13■□□□□ 0.01
SSBP3-202ENST00000357475 ZNF706Q9Y5V0 76 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-202ENST00000357475 TCL1BO95988 128 aa15.11■□□□□ 0.01
SSBP3-202ENST00000357475 A0A1W2PPM0 123 aa15.1■□□□□ 0.01
SSBP3-202ENST00000357475 A0A087X002 238 aa15.09■□□□□ 0.01
SSBP3-202ENST00000357475 LST1O00453 97 aa15.09■□□□□ 0.01
SSBP3-202ENST00000357475 LINC00483Q53H64 154 aa15.09■□□□□ 0.01
SSBP3-202ENST00000357475 IGLV5-48A0A075B6I7 105 aa15.07■□□□□ 0
SSBP3-202ENST00000357475 A0A1B0GX51 115 aa15.07■□□□□ 0
SSBP3-202ENST00000357475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.07■□□□□ 0
SSBP3-202ENST00000357475 Q8N377 158 aa15.07■□□□□ 0
SSBP3-202ENST00000357475 PRR26Q8N8Z3 221 aa15.06■□□□□ 0
SSBP3-202ENST00000357475 TNXBP22105 4242 aa15.04■□□□□ -0
SSBP3-202ENST00000357475 SPRR1BP22528 89 aa15.03■□□□□ -0
SSBP3-202ENST00000357475 C3orf22Q8N5N4 141 aa15.03■□□□□ -0
SSBP3-202ENST00000357475 LINC01600Q96MT4 127 aa15.03■□□□□ -0
SSBP3-202ENST00000357475 TEX49A0A1B0GTD5 131 aa15.02□□□□□ -0.01
SSBP3-202ENST00000357475 TRACP01848 142 aa15.02□□□□□ -0.01
SSBP3-202ENST00000357475 FABP2P12104 132 aa15.02□□□□□ -0.01
SSBP3-202ENST00000357475 KRTAP13-2Q52LG2 175 aa15.02□□□□□ -0.01
SSBP3-202ENST00000357475 LYRM7Q5U5X0 104 aa15.02□□□□□ -0.01
SSBP3-202ENST00000357475 SNCGO76070 127 aa15.01□□□□□ -0.01
SSBP3-202ENST00000357475 ATXN8Q156A1 80 aa15.01□□□□□ -0.01
SSBP3-202ENST00000357475 FAM229BQ4G0N7 80 aa15.01□□□□□ -0.01
SSBP3-202ENST00000357475 SMIM29Q86T20 159 aa15.01□□□□□ -0.01
SSBP3-202ENST00000357475 DNAL4O96015 105 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms