RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ACANP16112 2415 aa10.71□□□□□ -0.69
RXRA-201ENST00000356384 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.7
RXRA-201ENST00000356384 MIR22HGQ0VDD5 57 aa10.71□□□□□ -0.7
RXRA-201ENST00000356384 ERC2-IT1O76042 136 aa10.71□□□□□ -0.7
RXRA-201ENST00000356384 IGFL1Q6UW32 110 aa10.7□□□□□ -0.7
RXRA-201ENST00000356384 C8orf17Q9NRJ1 99 aa10.69□□□□□ -0.7
RXRA-201ENST00000356384 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
RXRA-201ENST00000356384 OBSCN-AS1Q96MR7 158 aa10.68□□□□□ -0.7
RXRA-201ENST00000356384 KCNQ1DNQ9H478 68 aa10.67□□□□□ -0.7
RXRA-201ENST00000356384 RANBP2P49792 3224 aaKnown RBP10.67□□□□□ -0.7
RXRA-201ENST00000356384 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
RXRA-201ENST00000356384 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
RXRA-201ENST00000356384 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.71
RXRA-201ENST00000356384 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
RXRA-201ENST00000356384 C9orf129Q5T035 196 aaKnown RBP10.63□□□□□ -0.71
RXRA-201ENST00000356384 BPTFQ12830 3046 aa10.63□□□□□ -0.71
RXRA-201ENST00000356384 LINC00304Q8N9R0 145 aa10.63□□□□□ -0.71
RXRA-201ENST00000356384 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
RXRA-201ENST00000356384 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
RXRA-201ENST00000356384 A0A1B0GVX0 72 aa10.62□□□□□ -0.71
RXRA-201ENST00000356384 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
RXRA-201ENST00000356384 LINC01554Q52M75 96 aa10.58□□□□□ -0.72
RXRA-201ENST00000356384 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
RXRA-201ENST00000356384 Q8N377 158 aa10.57□□□□□ -0.72
RXRA-201ENST00000356384 ZNF861PO60384 105 aa10.57□□□□□ -0.72
RXRA-201ENST00000356384 ANAPC11Q9NYG5 84 aa10.56□□□□□ -0.72
RXRA-201ENST00000356384 IGLV5-37A0A075B6J1 123 aa10.56□□□□□ -0.72
RXRA-201ENST00000356384 KLKP1Q107X0 134 aa10.56□□□□□ -0.72
RXRA-201ENST00000356384 COL27A1Q8IZC6 1860 aaPredicted RBP10.55□□□□□ -0.72
RXRA-201ENST00000356384 A0A0D9SG42 100 aa10.55□□□□□ -0.72
RXRA-201ENST00000356384 C15orf56Q8N910 161 aa10.55□□□□□ -0.72
RXRA-201ENST00000356384 CSNK1G2-AS1Q8NCQ2 148 aa10.53□□□□□ -0.72
RXRA-201ENST00000356384 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
RXRA-201ENST00000356384 LINC00336Q6ZUF6 198 aa10.52□□□□□ -0.73
RXRA-201ENST00000356384 TRANK1O15050 2925 aa10.5□□□□□ -0.73
RXRA-201ENST00000356384 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
RXRA-201ENST00000356384 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
RXRA-201ENST00000356384 KRTAP10-11P60412 298 aa10.49□□□□□ -0.73
RXRA-201ENST00000356384 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
RXRA-201ENST00000356384 H7BZZ5 65 aa10.48□□□□□ -0.73
RXRA-201ENST00000356384 EPG5Q9HCE0 2579 aa10.48□□□□□ -0.73
RXRA-201ENST00000356384 K7EIL1 84 aa10.48□□□□□ -0.73
RXRA-201ENST00000356384 CD164Q04900 197 aa10.48□□□□□ -0.73
RXRA-201ENST00000356384 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
RXRA-201ENST00000356384 Q8N1X5 172 aa10.47□□□□□ -0.73
RXRA-201ENST00000356384 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
RXRA-201ENST00000356384 KLK9Q2XQG4 91 aa10.46□□□□□ -0.73
RXRA-201ENST00000356384 A0A087WTM6 91 aa10.46□□□□□ -0.73
RXRA-201ENST00000356384 FAM104AQ969W3 186 aa10.46□□□□□ -0.74
RXRA-201ENST00000356384 LCA10Q71F78 164 aa10.46□□□□□ -0.74
RXRA-201ENST00000356384 IGLV5-48A0A075B6I7 105 aa10.45□□□□□ -0.74
RXRA-201ENST00000356384 CDH23Q9H251 3354 aa10.45□□□□□ -0.74
RXRA-201ENST00000356384 USP24Q9UPU5 2620 aa10.43□□□□□ -0.74
RXRA-201ENST00000356384 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
RXRA-201ENST00000356384 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
RXRA-201ENST00000356384 MGAM2Q2M2H8 2515 aa10.4□□□□□ -0.74
RXRA-201ENST00000356384 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
RXRA-201ENST00000356384 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
RXRA-201ENST00000356384 PLA2G2DQ9UNK4 145 aa10.4□□□□□ -0.74
RXRA-201ENST00000356384 UNC80Q8N2C7 3258 aa10.39□□□□□ -0.75
RXRA-201ENST00000356384 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
RXRA-201ENST00000356384 C19orf73Q9NVV2 129 aa10.39□□□□□ -0.75
RXRA-201ENST00000356384 HECTD1Q9ULT8 2610 aa10.38□□□□□ -0.75
RXRA-201ENST00000356384 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
RXRA-201ENST00000356384 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
RXRA-201ENST00000356384 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
RXRA-201ENST00000356384 GIG44P09565 113 aaPredicted RBP10.36□□□□□ -0.75
RXRA-201ENST00000356384 LUZP6Q538Z0 58 aa10.36□□□□□ -0.75
RXRA-201ENST00000356384 PRUNE2Q8WUY3 3088 aa10.35□□□□□ -0.75
RXRA-201ENST00000356384 CASC10Q5T4H9 136 aa10.35□□□□□ -0.75
RXRA-201ENST00000356384 KRTAP10-3P60369 221 aa10.34□□□□□ -0.75
RXRA-201ENST00000356384 SPANXA2-OT1Q8N9U9 137 aa10.34□□□□□ -0.75
RXRA-201ENST00000356384 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
RXRA-201ENST00000356384 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
RXRA-201ENST00000356384 CNBPP62633 177 aaKnown RBP10.25□□□□□ -0.77
RXRA-201ENST00000356384 Q1T7F1 81 aa10.25□□□□□ -0.77
RXRA-201ENST00000356384 SZT2Q5T011 3432 aa10.24□□□□□ -0.77
RXRA-201ENST00000356384 ATRQ13535 2644 aa10.24□□□□□ -0.77
RXRA-201ENST00000356384 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
RXRA-201ENST00000356384 PRRC2CQ9Y520 2896 aaKnown RBP10.23□□□□□ -0.77
RXRA-201ENST00000356384 Q6ZSA8 131 aa10.21□□□□□ -0.77
RXRA-201ENST00000356384 XIRP2A4UGR9 3374 aa10.18□□□□□ -0.78
RXRA-201ENST00000356384 A0A096LNT2 108 aa10.17□□□□□ -0.78
RXRA-201ENST00000356384 A0A1B0GU33 70 aa10.17□□□□□ -0.78
RXRA-201ENST00000356384 OCR1Q9BZK8 76 aa10.16□□□□□ -0.78
RXRA-201ENST00000356384 LINC00483Q53H64 154 aa10.15□□□□□ -0.78
RXRA-201ENST00000356384 MAST4O15021 2626 aa10.15□□□□□ -0.78
RXRA-201ENST00000356384 HRES1P13985 223 aa10.12□□□□□ -0.79
RXRA-201ENST00000356384 IGLV7-46A0A075B6I9 117 aa10.11□□□□□ -0.79
RXRA-201ENST00000356384 M0R2T5 61 aa10.11□□□□□ -0.79
RXRA-201ENST00000356384 TNP2Q05952 138 aa10.09□□□□□ -0.79
RXRA-201ENST00000356384 TRIOO75962 3097 aa10.05□□□□□ -0.8
RXRA-201ENST00000356384 CR1P17927 2039 aa10.04□□□□□ -0.8
RXRA-201ENST00000356384 Q75L30 129 aa10.04□□□□□ -0.8
RXRA-201ENST00000356384 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
RXRA-201ENST00000356384 KRTAP1-3Q8IUG1 177 aa10.04□□□□□ -0.8
RXRA-201ENST00000356384 DNAH14Q0VDD8 3507 aa10.04□□□□□ -0.8
RXRA-201ENST00000356384 SPTBN5Q9NRC6 3674 aaKnown RBP10.03□□□□□ -0.8
RXRA-201ENST00000356384 WIPF1O43516 503 aa9.99□□□□□ -0.81
RXRA-201ENST00000356384 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms