RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NSD1Q96L73 2696 aaPredicted RBP9.72□□□□□ -0.85
SREBF1-202ENST00000355815 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.85
SREBF1-202ENST00000355815 SMIM29Q86T20 159 aa9.71□□□□□ -0.85
SREBF1-202ENST00000355815 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
SREBF1-202ENST00000355815 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
SREBF1-202ENST00000355815 CSMD2Q7Z408 3487 aa9.7□□□□□ -0.86
SREBF1-202ENST00000355815 DEFB131BA0A096LNP1 70 aa9.69□□□□□ -0.86
SREBF1-202ENST00000355815 KRTAP1-3Q8IUG1 177 aa9.69□□□□□ -0.86
SREBF1-202ENST00000355815 A0A087WSZ3 146 aa9.68□□□□□ -0.86
SREBF1-202ENST00000355815 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
SREBF1-202ENST00000355815 C16orf95Q9H693 158 aa9.68□□□□□ -0.86
SREBF1-202ENST00000355815 CR1P17927 2039 aa9.68□□□□□ -0.86
SREBF1-202ENST00000355815 Q6ZTC4 211 aa9.67□□□□□ -0.86
SREBF1-202ENST00000355815 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
SREBF1-202ENST00000355815 LELP1Q5T871 98 aa9.66□□□□□ -0.86
SREBF1-202ENST00000355815 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
SREBF1-202ENST00000355815 X6R8D5 127 aa9.65□□□□□ -0.86
SREBF1-202ENST00000355815 DHRS4-AS1Q9P1J3 65 aa9.64□□□□□ -0.87
SREBF1-202ENST00000355815 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
SREBF1-202ENST00000355815 IGLV9-49A0A0B4J1Y8 123 aa9.63□□□□□ -0.87
SREBF1-202ENST00000355815 CXCL6P80162 114 aa9.63□□□□□ -0.87
SREBF1-202ENST00000355815 Q6ZQT0 140 aa9.63□□□□□ -0.87
SREBF1-202ENST00000355815 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
SREBF1-202ENST00000355815 B9D2Q9BPU9 175 aa9.62□□□□□ -0.87
SREBF1-202ENST00000355815 CASC2Q6XLA1 102 aa9.62□□□□□ -0.87
SREBF1-202ENST00000355815 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
SREBF1-202ENST00000355815 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
SREBF1-202ENST00000355815 CSNK1G2-AS1Q8NCQ2 148 aa9.61□□□□□ -0.87
SREBF1-202ENST00000355815 BSNQ9UPA5 3926 aa9.6□□□□□ -0.87
SREBF1-202ENST00000355815 H0Y9P7 68 aa9.6□□□□□ -0.87
SREBF1-202ENST00000355815 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
SREBF1-202ENST00000355815 Q6ZRU5 148 aa9.6□□□□□ -0.87
SREBF1-202ENST00000355815 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
SREBF1-202ENST00000355815 BAHCC1Q9P281 2608 aa9.58□□□□□ -0.88
SREBF1-202ENST00000355815 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
SREBF1-202ENST00000355815 A8MUN3 132 aa9.58□□□□□ -0.88
SREBF1-202ENST00000355815 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
SREBF1-202ENST00000355815 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
SREBF1-202ENST00000355815 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
SREBF1-202ENST00000355815 H7BZZ5 65 aa9.56□□□□□ -0.88
SREBF1-202ENST00000355815 HCG22E2RYF7 251 aa9.55□□□□□ -0.88
SREBF1-202ENST00000355815 PRLHP81277 87 aa9.55□□□□□ -0.88
SREBF1-202ENST00000355815 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
SREBF1-202ENST00000355815 Q5XG85 94 aa9.55□□□□□ -0.88
SREBF1-202ENST00000355815 SPAG11AQ6PDA7 123 aa9.54□□□□□ -0.88
SREBF1-202ENST00000355815 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
SREBF1-202ENST00000355815 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
SREBF1-202ENST00000355815 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
SREBF1-202ENST00000355815 M0R2N4 97 aa9.51□□□□□ -0.89
SREBF1-202ENST00000355815 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
SREBF1-202ENST00000355815 OXTP01178 125 aa9.5□□□□□ -0.89
SREBF1-202ENST00000355815 Q8NAQ8 132 aa9.48□□□□□ -0.89
SREBF1-202ENST00000355815 SPINK1P00995 79 aa9.48□□□□□ -0.89
SREBF1-202ENST00000355815 Q9BRP9 147 aa9.48□□□□□ -0.89
SREBF1-202ENST00000355815 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
SREBF1-202ENST00000355815 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
SREBF1-202ENST00000355815 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
SREBF1-202ENST00000355815 KLKP1Q107X0 134 aa9.46□□□□□ -0.89
SREBF1-202ENST00000355815 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
SREBF1-202ENST00000355815 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
SREBF1-202ENST00000355815 BCE1O60756 84 aa9.45□□□□□ -0.9
SREBF1-202ENST00000355815 CD164Q04900 197 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 VWFP04275 2813 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
SREBF1-202ENST00000355815 KRTAP24-1Q3LI83 254 aa9.42□□□□□ -0.9
SREBF1-202ENST00000355815 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
SREBF1-202ENST00000355815 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
SREBF1-202ENST00000355815 K7EQZ3 153 aa9.41□□□□□ -0.9
SREBF1-202ENST00000355815 ELOF1P60002 83 aaKnown RBP9.41□□□□□ -0.9
SREBF1-202ENST00000355815 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
SREBF1-202ENST00000355815 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.9
SREBF1-202ENST00000355815 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-202ENST00000355815 LINC00167Q96N53 147 aa9.39□□□□□ -0.91
SREBF1-202ENST00000355815 TENM4Q6N022 2769 aa9.39□□□□□ -0.91
SREBF1-202ENST00000355815 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
SREBF1-202ENST00000355815 Q8NBF4 154 aa9.38□□□□□ -0.91
SREBF1-202ENST00000355815 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
SREBF1-202ENST00000355815 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
SREBF1-202ENST00000355815 PDZD2O15018 2839 aa9.36□□□□□ -0.91
SREBF1-202ENST00000355815 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
SREBF1-202ENST00000355815 TRAV22A0A0B4J277 110 aa9.36□□□□□ -0.91
SREBF1-202ENST00000355815 CIRBP-AS1Q8TBR5 109 aa9.36□□□□□ -0.91
SREBF1-202ENST00000355815 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
SREBF1-202ENST00000355815 LINC00476Q8WZB0 136 aa9.35□□□□□ -0.91
SREBF1-202ENST00000355815 OTOGQ6ZRI0 2925 aa9.34□□□□□ -0.91
SREBF1-202ENST00000355815 K7ERS5 55 aa9.34□□□□□ -0.92
SREBF1-202ENST00000355815 IGLV6-57P01721 117 aa9.32□□□□□ -0.92
SREBF1-202ENST00000355815 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
SREBF1-202ENST00000355815 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-202ENST00000355815 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-202ENST00000355815 Q6ZRP5 223 aa9.31□□□□□ -0.92
SREBF1-202ENST00000355815 ZFHX3Q15911 3703 aa9.31□□□□□ -0.92
SREBF1-202ENST00000355815 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
SREBF1-202ENST00000355815 VPREB1P12018 145 aa9.3□□□□□ -0.92
SREBF1-202ENST00000355815 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
SREBF1-202ENST00000355815 MDFIQ99750 246 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms