RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
PRPF39-201ENST00000355765 HIVEP2P31629 2446 aa12.48□□□□□ -0.41
PRPF39-201ENST00000355765 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
PRPF39-201ENST00000355765 M0R378 163 aa12.47□□□□□ -0.41
PRPF39-201ENST00000355765 SEC61GP60059 68 aa12.47□□□□□ -0.41
PRPF39-201ENST00000355765 PRR34Q9NV39 138 aa12.46□□□□□ -0.42
PRPF39-201ENST00000355765 KRTAP1-1Q07627 177 aa12.45□□□□□ -0.42
PRPF39-201ENST00000355765 SMR3AQ99954 134 aa12.45□□□□□ -0.42
PRPF39-201ENST00000355765 VWFP04275 2813 aa12.45□□□□□ -0.42
PRPF39-201ENST00000355765 LELP1Q5T871 98 aa12.45□□□□□ -0.42
PRPF39-201ENST00000355765 hDV103S1A0JD37 113 aa12.44□□□□□ -0.42
PRPF39-201ENST00000355765 Q6ZRU5 148 aa12.44□□□□□ -0.42
PRPF39-201ENST00000355765 PRR4Q16378 134 aa12.44□□□□□ -0.42
PRPF39-201ENST00000355765 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-201ENST00000355765 C1orf64Q8NEQ6 169 aa12.42□□□□□ -0.42
PRPF39-201ENST00000355765 Q6ZRP5 223 aa12.42□□□□□ -0.42
PRPF39-201ENST00000355765 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
PRPF39-201ENST00000355765 Q8N377 158 aa12.41□□□□□ -0.42
PRPF39-201ENST00000355765 PSPHP1O15172 72 aa12.4□□□□□ -0.42
PRPF39-201ENST00000355765 KPRPQ5T749 579 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-201ENST00000355765 ANK3Q12955 4377 aaKnown RBP12.37□□□□□ -0.43
PRPF39-201ENST00000355765 A0A1W2PNM2 257 aa12.36□□□□□ -0.43
PRPF39-201ENST00000355765 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
PRPF39-201ENST00000355765 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
PRPF39-201ENST00000355765 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
PRPF39-201ENST00000355765 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 K7EQZ3 153 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 Q1T7F1 81 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 PRR15Q8IV56 129 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 C15orf56Q8N910 161 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 ST20-AS1Q8NBB2 130 aa12.32□□□□□ -0.44
PRPF39-201ENST00000355765 LCE6AA0A183 80 aa12.31□□□□□ -0.44
PRPF39-201ENST00000355765 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-201ENST00000355765 KRTAP10-3P60369 221 aa12.31□□□□□ -0.44
PRPF39-201ENST00000355765 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
PRPF39-201ENST00000355765 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
PRPF39-201ENST00000355765 Q8NAQ8 132 aa12.3□□□□□ -0.44
PRPF39-201ENST00000355765 NKAPP1Q8N9T2 125 aa12.3□□□□□ -0.44
PRPF39-201ENST00000355765 ZCCHC13Q8WW36 166 aaKnown RBP12.3□□□□□ -0.44
PRPF39-201ENST00000355765 ETDCA0A1B0GVM5 59 aa12.29□□□□□ -0.44
PRPF39-201ENST00000355765 DSCR10P59022 87 aa12.29□□□□□ -0.44
PRPF39-201ENST00000355765 TRAV22A0A0B4J277 110 aa12.29□□□□□ -0.44
PRPF39-201ENST00000355765 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
PRPF39-201ENST00000355765 C7orf33Q8WU49 177 aa12.28□□□□□ -0.44
PRPF39-201ENST00000355765 HIVEP1P15822 2718 aa12.28□□□□□ -0.44
PRPF39-201ENST00000355765 PMAIP1Q13794 54 aa12.28□□□□□ -0.44
PRPF39-201ENST00000355765 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
PRPF39-201ENST00000355765 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.45
PRPF39-201ENST00000355765 NSD1Q96L73 2696 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-201ENST00000355765 F8P00451 2351 aa12.26□□□□□ -0.45
PRPF39-201ENST00000355765 KCNQ1DNQ9H478 68 aa12.26□□□□□ -0.45
PRPF39-201ENST00000355765 PKD1L1Q8TDX9 2849 aa12.25□□□□□ -0.45
PRPF39-201ENST00000355765 A8MU10 97 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 Q8NBF4 154 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 Q9BRP9 147 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 DEFB116Q30KQ4 102 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 A0A0G2JQZ4 141 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 A0A1W2PNN7 141 aa12.24□□□□□ -0.45
PRPF39-201ENST00000355765 A8MUN3 132 aa12.23□□□□□ -0.45
PRPF39-201ENST00000355765 APOC4P55056 127 aa12.23□□□□□ -0.45
PRPF39-201ENST00000355765 INAFM1C9JVW0 142 aa12.21□□□□□ -0.45
PRPF39-201ENST00000355765 IGKV2D-24A0A075B6R9 120 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 TNP2Q05952 138 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 FAM168BA1KXE4 195 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 PSCAO43653 123 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 SYCNQ0VAF6 134 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 Q6ZRX8 168 aa12.2□□□□□ -0.46
PRPF39-201ENST00000355765 HCG22E2RYF7 251 aa12.19□□□□□ -0.46
PRPF39-201ENST00000355765 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
PRPF39-201ENST00000355765 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
PRPF39-201ENST00000355765 CYP4F30PQ9H0H9 118 aa12.16□□□□□ -0.46
PRPF39-201ENST00000355765 SPRR4Q96PI1 79 aa12.16□□□□□ -0.46
PRPF39-201ENST00000355765 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
PRPF39-201ENST00000355765 A0A1B0GW54 56 aa12.13□□□□□ -0.47
PRPF39-201ENST00000355765 ATRQ13535 2644 aa12.12□□□□□ -0.47
PRPF39-201ENST00000355765 KRTAP4-16G5E9R7 235 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-201ENST00000355765 LINC00208Q96KT6 92 aa12.12□□□□□ -0.47
PRPF39-201ENST00000355765 UBE2BP63146 152 aa12.11□□□□□ -0.47
PRPF39-201ENST00000355765 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
PRPF39-201ENST00000355765 Q5VV11 94 aa12.09□□□□□ -0.47
PRPF39-201ENST00000355765 IGLV1-50A0A075B6I6 118 aa12.09□□□□□ -0.47
PRPF39-201ENST00000355765 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.47
PRPF39-201ENST00000355765 B9D2Q9BPU9 175 aa12.08□□□□□ -0.47
PRPF39-201ENST00000355765 TEP1Q99973 2627 aaKnown RBP12.08□□□□□ -0.47
PRPF39-201ENST00000355765 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
PRPF39-201ENST00000355765 MP68P56378 58 aa12.08□□□□□ -0.48
PRPF39-201ENST00000355765 RETNQ9HD89 108 aa12.07□□□□□ -0.48
PRPF39-201ENST00000355765 BAHCC1Q9P281 2608 aa12.07□□□□□ -0.48
PRPF39-201ENST00000355765 NDUFB1O75438 58 aa12.06□□□□□ -0.48
PRPF39-201ENST00000355765 CHKB-CPT1BH3BT56 60 aa12.04□□□□□ -0.48
PRPF39-201ENST00000355765 KRTAP7-1Q8IUC3 87 aa12.04□□□□□ -0.48
PRPF39-201ENST00000355765 SPRR1AP35321 89 aa12.04□□□□□ -0.48
PRPF39-201ENST00000355765 A0A087WSZ3 146 aa12.02□□□□□ -0.48
PRPF39-201ENST00000355765 IGFL1Q6UW32 110 aa12.02□□□□□ -0.49
PRPF39-201ENST00000355765 PRR15LQ9BU68 103 aa12.01□□□□□ -0.49
PRPF39-201ENST00000355765 CASC10Q5T4H9 136 aa12□□□□□ -0.49
PRPF39-201ENST00000355765 Q8N9P0 234 aaPredicted RBP12□□□□□ -0.49
PRPF39-201ENST00000355765 H0Y9P7 68 aa11.99□□□□□ -0.49
PRPF39-201ENST00000355765 SPTSSBQ8NFR3 76 aa11.99□□□□□ -0.49
PRPF39-201ENST00000355765 MRPL55Q7Z7F7 128 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms