RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 H0YGX0 51 aa9.84□□□□□ -0.83
CTSA-202ENST00000354880 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
CTSA-202ENST00000354880 DIRC1Q969H9 104 aa9.84□□□□□ -0.83
CTSA-202ENST00000354880 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
CTSA-202ENST00000354880 H3BMG7 143 aa9.82□□□□□ -0.84
CTSA-202ENST00000354880 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
CTSA-202ENST00000354880 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
CTSA-202ENST00000354880 LST1O00453 97 aa9.81□□□□□ -0.84
CTSA-202ENST00000354880 PRYO14603 147 aa9.81□□□□□ -0.84
CTSA-202ENST00000354880 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
CTSA-202ENST00000354880 KRTAP10-1P60331 282 aa9.79□□□□□ -0.84
CTSA-202ENST00000354880 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
CTSA-202ENST00000354880 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
CTSA-202ENST00000354880 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
CTSA-202ENST00000354880 UBE2BP63146 152 aa9.79□□□□□ -0.84
CTSA-202ENST00000354880 A0A1B0GVY2 172 aa9.78□□□□□ -0.84
CTSA-202ENST00000354880 FAM30AQ9NZY2 134 aa9.78□□□□□ -0.84
CTSA-202ENST00000354880 SPRR1AP35321 89 aa9.77□□□□□ -0.84
CTSA-202ENST00000354880 ELOF1P60002 83 aaKnown RBP9.77□□□□□ -0.84
CTSA-202ENST00000354880 COX7BP24311 80 aa9.77□□□□□ -0.85
CTSA-202ENST00000354880 REG3GQ6UW15 175 aa9.77□□□□□ -0.85
CTSA-202ENST00000354880 Q6ZSA8 131 aa9.77□□□□□ -0.85
CTSA-202ENST00000354880 TRACP01848 142 aa9.76□□□□□ -0.85
CTSA-202ENST00000354880 DYNC1H1Q14204 4646 aaKnown RBP9.76□□□□□ -0.85
CTSA-202ENST00000354880 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
CTSA-202ENST00000354880 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
CTSA-202ENST00000354880 LINC00575Q6W349 94 aa9.75□□□□□ -0.85
CTSA-202ENST00000354880 KRTAP11-1Q8IUC1 163 aa9.75□□□□□ -0.85
CTSA-202ENST00000354880 A0A1B0GX51 115 aa9.74□□□□□ -0.85
CTSA-202ENST00000354880 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
CTSA-202ENST00000354880 C9JAW5 83 aa9.73□□□□□ -0.85
CTSA-202ENST00000354880 SNCGO76070 127 aa9.73□□□□□ -0.85
CTSA-202ENST00000354880 DNAL4O96015 105 aa9.73□□□□□ -0.85
CTSA-202ENST00000354880 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
CTSA-202ENST00000354880 SLC25A20O43772 301 aa9.72□□□□□ -0.85
CTSA-202ENST00000354880 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
CTSA-202ENST00000354880 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
CTSA-202ENST00000354880 B5MCH6 92 aa9.72□□□□□ -0.85
CTSA-202ENST00000354880 F8W1H4 67 aa9.71□□□□□ -0.85
CTSA-202ENST00000354880 Q6ZRX8 168 aa9.71□□□□□ -0.85
CTSA-202ENST00000354880 SCXQ7RTU7 201 aa9.71□□□□□ -0.85
CTSA-202ENST00000354880 PRO0461Q9UI25 63 aa9.71□□□□□ -0.85
CTSA-202ENST00000354880 FAM19A1Q7Z5A9 133 aa9.69□□□□□ -0.86
CTSA-202ENST00000354880 INAFM2P0DMQ5 153 aa9.68□□□□□ -0.86
CTSA-202ENST00000354880 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
CTSA-202ENST00000354880 Q9BRP9 147 aa9.67□□□□□ -0.86
CTSA-202ENST00000354880 DHRS4-AS1Q9P1J3 65 aa9.67□□□□□ -0.86
CTSA-202ENST00000354880 HAMPP81172 84 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 ANKRD29Q8N6D5 301 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 H3BT86 120 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 BCE1O60756 84 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 PRLHP81277 87 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
CTSA-202ENST00000354880 Q6ZQY7 126 aa9.65□□□□□ -0.86
CTSA-202ENST00000354880 APOBP04114 4563 aaKnown RBP9.65□□□□□ -0.87
CTSA-202ENST00000354880 BAALC-AS2P0C853 105 aa9.64□□□□□ -0.87
CTSA-202ENST00000354880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
CTSA-202ENST00000354880 H0Y9J4 135 aa9.63□□□□□ -0.87
CTSA-202ENST00000354880 UBE2AP49459 152 aa9.63□□□□□ -0.87
CTSA-202ENST00000354880 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
CTSA-202ENST00000354880 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
CTSA-202ENST00000354880 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
CTSA-202ENST00000354880 C1orf137Q5JT78 98 aa9.61□□□□□ -0.87
CTSA-202ENST00000354880 HIGD2AQ9BW72 106 aa9.61□□□□□ -0.87
CTSA-202ENST00000354880 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
CTSA-202ENST00000354880 TMEM256-PLSCR3K7ERE1 68 aa9.6□□□□□ -0.87
CTSA-202ENST00000354880 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
CTSA-202ENST00000354880 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
CTSA-202ENST00000354880 KRTAP13-1Q8IUC0 172 aa9.6□□□□□ -0.87
CTSA-202ENST00000354880 SRRM2Q9UQ35 2752 aaKnown RBP9.6□□□□□ -0.87
CTSA-202ENST00000354880 GHRHP01286 108 aa9.59□□□□□ -0.88
CTSA-202ENST00000354880 H3BQ85 93 aa9.58□□□□□ -0.88
CTSA-202ENST00000354880 XGP55808 180 aa9.57□□□□□ -0.88
CTSA-202ENST00000354880 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
CTSA-202ENST00000354880 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
CTSA-202ENST00000354880 DEFB105AQ8NG35 78 aa9.55□□□□□ -0.88
CTSA-202ENST00000354880 ZNF861PO60384 105 aa9.54□□□□□ -0.88
CTSA-202ENST00000354880 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
CTSA-202ENST00000354880 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
CTSA-202ENST00000354880 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
CTSA-202ENST00000354880 Q8N377 158 aa9.53□□□□□ -0.88
CTSA-202ENST00000354880 PPDPFLQ8WWR9 84 aa9.53□□□□□ -0.88
CTSA-202ENST00000354880 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.89
CTSA-202ENST00000354880 FAT1Q14517 4588 aa9.51□□□□□ -0.89
CTSA-202ENST00000354880 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
CTSA-202ENST00000354880 A0A1B0GV72 72 aa9.48□□□□□ -0.89
CTSA-202ENST00000354880 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
CTSA-202ENST00000354880 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CTSA-202ENST00000354880 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
CTSA-202ENST00000354880 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
CTSA-202ENST00000354880 EPPK1P58107 5090 aaKnown RBP9.46□□□□□ -0.89
CTSA-202ENST00000354880 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.9
CTSA-202ENST00000354880 C3orf22Q8N5N4 141 aa9.46□□□□□ -0.9
CTSA-202ENST00000354880 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
CTSA-202ENST00000354880 HSPG2P98160 4391 aa9.45□□□□□ -0.9
CTSA-202ENST00000354880 SPRR1BP22528 89 aa9.45□□□□□ -0.9
CTSA-202ENST00000354880 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
CTSA-202ENST00000354880 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
CTSA-202ENST00000354880 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms