RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 Q6ZRP5 223 aa5.5□□□□□ -1.53
SCN8A-201ENST00000354534 J3QL48 77 aa5.49□□□□□ -1.53
SCN8A-201ENST00000354534 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
SCN8A-201ENST00000354534 PRO0461Q9UI25 63 aa5.48□□□□□ -1.53
SCN8A-201ENST00000354534 CENPEQ02224 2701 aa5.47□□□□□ -1.53
SCN8A-201ENST00000354534 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
SCN8A-201ENST00000354534 C16orf90A8MZG2 172 aa5.47□□□□□ -1.53
SCN8A-201ENST00000354534 RTL8CO15255 209 aa5.47□□□□□ -1.53
SCN8A-201ENST00000354534 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.53
SCN8A-201ENST00000354534 BPTFQ12830 3046 aa5.46□□□□□ -1.53
SCN8A-201ENST00000354534 AKAP13Q12802 2813 aa5.46□□□□□ -1.54
SCN8A-201ENST00000354534 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.54
SCN8A-201ENST00000354534 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
SCN8A-201ENST00000354534 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
SCN8A-201ENST00000354534 LINC00588Q9Y4M8 146 aa5.45□□□□□ -1.54
SCN8A-201ENST00000354534 STAB1Q9NY15 2570 aa5.45□□□□□ -1.54
SCN8A-201ENST00000354534 AVPP01185 164 aa5.44□□□□□ -1.54
SCN8A-201ENST00000354534 Q8N1X5 172 aa5.44□□□□□ -1.54
SCN8A-201ENST00000354534 FHL3Q13643 280 aa5.44□□□□□ -1.54
SCN8A-201ENST00000354534 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
SCN8A-201ENST00000354534 H7BZZ5 65 aa5.44□□□□□ -1.54
SCN8A-201ENST00000354534 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
SCN8A-201ENST00000354534 C16orf95Q9H693 158 aa5.43□□□□□ -1.54
SCN8A-201ENST00000354534 A0A1B0GVX0 72 aa5.42□□□□□ -1.54
SCN8A-201ENST00000354534 CDSNQ15517 529 aa5.41□□□□□ -1.54
SCN8A-201ENST00000354534 COL4A2P08572 1712 aa5.41□□□□□ -1.54
SCN8A-201ENST00000354534 EP400Q96L91 3159 aa5.4□□□□□ -1.54
SCN8A-201ENST00000354534 SPINK7P58062 85 aa5.4□□□□□ -1.55
SCN8A-201ENST00000354534 LINC00315P59091 139 aa5.4□□□□□ -1.55
SCN8A-201ENST00000354534 KRTAP10-9P60411 292 aa5.4□□□□□ -1.55
SCN8A-201ENST00000354534 FLNAP21333 2647 aaKnown RBP5.39□□□□□ -1.55
SCN8A-201ENST00000354534 IGFL1Q6UW32 110 aa5.39□□□□□ -1.55
SCN8A-201ENST00000354534 NOTCH1P46531 2555 aa5.39□□□□□ -1.55
SCN8A-201ENST00000354534 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
SCN8A-201ENST00000354534 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
SCN8A-201ENST00000354534 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
SCN8A-201ENST00000354534 H3BNG1 76 aa5.38□□□□□ -1.55
SCN8A-201ENST00000354534 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
SCN8A-201ENST00000354534 ITPR3Q14573 2671 aa5.37□□□□□ -1.55
SCN8A-201ENST00000354534 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
SCN8A-201ENST00000354534 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
SCN8A-201ENST00000354534 CFAP46Q8IYW2 2715 aa5.36□□□□□ -1.55
SCN8A-201ENST00000354534 A0A1B0GU33 70 aa5.36□□□□□ -1.55
SCN8A-201ENST00000354534 GVQW2A0A096LPI5 108 aaPredicted RBP5.35□□□□□ -1.55
SCN8A-201ENST00000354534 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
SCN8A-201ENST00000354534 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
SCN8A-201ENST00000354534 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
SCN8A-201ENST00000354534 KRTAP16-1A8MUX0 517 aa5.33□□□□□ -1.56
SCN8A-201ENST00000354534 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
SCN8A-201ENST00000354534 SMR3BP02814 79 aaPredicted RBP5.32□□□□□ -1.56
SCN8A-201ENST00000354534 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
SCN8A-201ENST00000354534 Q8N377 158 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 CENPFP49454 3210 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 M0R2T5 61 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 STAB2Q8WWQ8 2551 aa5.31□□□□□ -1.56
SCN8A-201ENST00000354534 Q75L30 129 aa5.3□□□□□ -1.56
SCN8A-201ENST00000354534 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
SCN8A-201ENST00000354534 ANAPC11Q9NYG5 84 aa5.3□□□□□ -1.56
SCN8A-201ENST00000354534 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
SCN8A-201ENST00000354534 ZNF861PO60384 105 aa5.28□□□□□ -1.56
SCN8A-201ENST00000354534 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
SCN8A-201ENST00000354534 BAHCC1Q9P281 2608 aa5.27□□□□□ -1.57
SCN8A-201ENST00000354534 HELZ2Q9BYK8 2649 aaKnown RBP5.27□□□□□ -1.57
SCN8A-201ENST00000354534 GCN1Q92616 2671 aaKnown RBP5.26□□□□□ -1.57
SCN8A-201ENST00000354534 HRES1P13985 223 aa5.26□□□□□ -1.57
SCN8A-201ENST00000354534 LITAFQ99732 161 aa5.26□□□□□ -1.57
SCN8A-201ENST00000354534 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
SCN8A-201ENST00000354534 FAM229BQ4G0N7 80 aa5.25□□□□□ -1.57
SCN8A-201ENST00000354534 COL6A5A8TX70 2615 aa5.25□□□□□ -1.57
SCN8A-201ENST00000354534 DNAH10OSP0CZ25 163 aa5.25□□□□□ -1.57
SCN8A-201ENST00000354534 DNAH12Q6ZR08 3092 aa5.25□□□□□ -1.57
SCN8A-201ENST00000354534 C15orf56Q8N910 161 aa5.24□□□□□ -1.57
SCN8A-201ENST00000354534 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
SCN8A-201ENST00000354534 PCNTO95613 3336 aa5.24□□□□□ -1.57
SCN8A-201ENST00000354534 Q6ZSA8 131 aa5.24□□□□□ -1.57
SCN8A-201ENST00000354534 UNC79Q9P2D8 2635 aa5.23□□□□□ -1.57
SCN8A-201ENST00000354534 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
SCN8A-201ENST00000354534 A0A0C4DFX4 3053 aa5.22□□□□□ -1.57
SCN8A-201ENST00000354534 GOLGB1Q14789 3259 aaKnown RBP5.22□□□□□ -1.57
SCN8A-201ENST00000354534 CHD6Q8TD26 2715 aa5.22□□□□□ -1.57
SCN8A-201ENST00000354534 S4R3F8 94 aa5.21□□□□□ -1.57
SCN8A-201ENST00000354534 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
SCN8A-201ENST00000354534 ROMO1P60602 79 aa5.2□□□□□ -1.58
SCN8A-201ENST00000354534 IGLV7-43P04211 117 aa5.2□□□□□ -1.58
SCN8A-201ENST00000354534 Q8NAQ8 132 aa5.2□□□□□ -1.58
SCN8A-201ENST00000354534 CEP350Q5VT06 3117 aa5.19□□□□□ -1.58
SCN8A-201ENST00000354534 TEP1Q99973 2627 aaKnown RBP5.18□□□□□ -1.58
SCN8A-201ENST00000354534 A0A1W2PPR1 153 aa5.18□□□□□ -1.58
SCN8A-201ENST00000354534 R4GN34 69 aa5.18□□□□□ -1.58
SCN8A-201ENST00000354534 OCR1Q9BZK8 76 aa5.17□□□□□ -1.58
SCN8A-201ENST00000354534 TEX15Q9BXT5 2789 aa5.17□□□□□ -1.58
SCN8A-201ENST00000354534 EIF4EBP3O60516 100 aaPredicted RBP5.17□□□□□ -1.58
SCN8A-201ENST00000354534 Q5XG85 94 aa5.15□□□□□ -1.58
SCN8A-201ENST00000354534 Q5VV11 94 aa5.15□□□□□ -1.59
SCN8A-201ENST00000354534 C10orf142B7Z368 130 aa5.15□□□□□ -1.59
SCN8A-201ENST00000354534 WWC2-AS2Q96NR7 200 aa5.15□□□□□ -1.59
SCN8A-201ENST00000354534 C19orf73Q9NVV2 129 aa5.15□□□□□ -1.59
SCN8A-201ENST00000354534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms